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- PDB-3dpa: CRYSTAL STRUCTURE OF CHAPERONE PROTEIN PAPD REVEALS AN IMMUNOGLOB... -
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Open data
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Basic information
Entry | Database: PDB / ID: 3dpa | ||||||
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Title | CRYSTAL STRUCTURE OF CHAPERONE PROTEIN PAPD REVEALS AN IMMUNOGLOBULIN FOLD | ||||||
![]() | CHAPERONE PROTEIN PAPD | ||||||
![]() | CHAPERONE PROTEIN | ||||||
Function / homology | ![]() chaperone-mediated protein folding / cell wall organization / outer membrane-bounded periplasmic space Similarity search - Function | ||||||
Biological species | ![]() ![]() | ||||||
Method | ![]() | ||||||
![]() | Holmgren, A. / Branden, C.-I. | ||||||
![]() | ![]() Title: Crystal structure of chaperone protein PapD reveals an immunoglobulin fold. Authors: Holmgren, A. / Branden, C.I. #1: ![]() Title: Preliminary X-Ray Study of Papd Crystals from Uropathogenic Escherichia Coli Authors: Holmgren, A. / Branden, C.-I. / Lindberg, F. / Tennant, J.M. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 16.5 KB | Display | ![]() |
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PDB format | ![]() | 7.5 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 285.9 KB | Display | ![]() |
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Full document | ![]() | 285.9 KB | Display | |
Data in XML | ![]() | 734 B | Display | |
Data in CIF | ![]() | 2.6 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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Unit cell |
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Components
#1: Protein | Mass: 24575.869 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() |
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-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 2.54 Å3/Da / Density % sol: 51.52 % | |||||||||||||||
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Crystal grow | *PLUS Method: vapor diffusion, hanging drop | |||||||||||||||
Components of the solutions | *PLUS
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-Data collection
Reflection | *PLUS Highest resolution: 2.5 Å / Num. obs: 6353 / % possible obs: 69.2 % / Num. measured all: 20920 / Rmerge(I) obs: 0.053 |
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Processing
Software | Name: ![]() | ||||||||||||
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Refinement | Rfactor Rwork: 0.184 / Highest resolution: 2.5 Å | ||||||||||||
Refinement step | Cycle: LAST / Highest resolution: 2.5 Å
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Refinement | *PLUS Highest resolution: 2.5 Å / Rfactor obs: 0.184 | ||||||||||||
Solvent computation | *PLUS | ||||||||||||
Displacement parameters | *PLUS |