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- PDB-341d: STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE... -
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Open data
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Basic information
Entry | Database: PDB / ID: 341d | ||||||||||||||||||
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Title | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | ||||||||||||||||||
![]() | DNA (5'-D(*![]() DNA / A-DNA / DOUBLE HELIX / MODIFIED | Function / homology | DNA | ![]() Method | ![]() ![]() ![]() Mooers, B.H.M. / Eichman, B.F. / Ho, P.S. | ![]() ![]() Title: Structural Parameters from Single-Crystal Structures For Accurate Models of A-DNA Authors: Mooers, B.H.M. / Eichman, B.F. / Ho, P.S. History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 12.3 KB | Display | ![]() |
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PDB format | ![]() | 7.4 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 358.1 KB | Display | ![]() |
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Full document | ![]() | 358 KB | Display | |
Data in XML | ![]() | 2.6 KB | Display | |
Data in CIF | ![]() | 2.9 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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1 | ![]()
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Unit cell |
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Components
#1: DNA chain | Mass: 2456.647 Da / Num. of mol.: 1 / Source method: obtained synthetically |
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#2: Water | ChemComp-HOH / |
-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 2.98 Å3/Da / Density % sol: 58.7 % Description: CRYSTALLIZED IN THE PRESENCE OF MAGNESIUM CHLORIDE | ||||||||||||
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Crystal grow | Method: vapor diffusion / pH: 7 / Details: pH 7.00, VAPOR DIFFUSION | ||||||||||||
Components of the solutions |
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-Data collection
Diffraction | Mean temperature: 298 K |
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Detector | Type: SIEMENS HI-STAR / Detector: AREA DETECTOR / Date: Oct 10, 1995 |
Radiation | Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Relative weight: 1 |
Reflection | Resolution: 1.71→30.3 Å / Num. obs: 2642 / % possible obs: 71.91 % / Redundancy: 2.5 % / Rmerge(I) obs: 0.085 |
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Processing
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Refinement | Method to determine structure: ![]()
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Displacement parameters | Biso mean: 30.1 Å2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement step | Cycle: LAST / Resolution: 1.75→7.7 Å
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Refine LS restraints |
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Xplor file | Serial no: 1 / Param file: GMGMMG.PAR / Topol file: TOP.DNA |