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- PDB-2ypz: KSHV LANA (ORF73) C-terminal domain, decameric ring: orthorhombic... -

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Basic information

Entry
Database: PDB / ID: 2ypz
TitleKSHV LANA (ORF73) C-terminal domain, decameric ring: orthorhombic crystal form
ComponentsKSHV LANA
KeywordsVIRAL PROTEIN / LATENCY-ASSOCIATED NUCLEAR ANTIGEN / LANA-1 / DNA-BINDING DOMAIN / ORIGIN-BINDING DOMAIN / OLIGOMERIZATION DOMAIN / KAPOSI'S SARCOMA-ASSOCIATED HERPESVIRUS / GAMMAHERPESVIRUS / RHADINOVIRUS / PRIMARY EFFUSION LYMPHOMA / MULTICENTRIC CASTLEMAN'S DISEASE / TUMOR VIRUS / CANCER / MURID HERPESVIRUS 4 / MUHV-4 / MURID HERPESVIRUS 68 / MHV-68
Function / homology
Function and homology information


host cell nucleus / DNA binding
Similarity search - Function
: / Protein LANA1-like, DNA-binding domain / Epstein Barr virus nuclear antigen-1, DNA-binding domain / Epstein Barr virus nuclear antigen-1, DNA-binding domain superfamily / Alpha-Beta Plaits / 2-Layer Sandwich / Alpha Beta
Similarity search - Domain/homology
Biological speciesHUMAN HERPESVIRUS 8 TYPE M
MethodX-RAY DIFFRACTION / MOLECULAR REPLACEMENT / Resolution: 3.199 Å
AuthorsHellert, J. / Krausze, J. / Luhrs, T.
CitationJournal: Plos Pathog. / Year: 2013
Title: A Structural Basis for Brd2/4-Mediated Host Chromatin Interaction and Oligomer Assembly of Kaposi Sarcoma-Associated Herpesvirus and Murine Gammaherpesvirus Lana Proteins.
Authors: Hellert, J. / Weidner-Glunde, M. / Krausze, J. / Richter, U. / Adler, H. / Fedorov, R. / Pietrek, M. / Ruckert, J. / Ritter, C. / Schulz, T.F. / Luhrs, T.
History
DepositionNov 2, 2012Deposition site: PDBE / Processing site: PDBE
Revision 1.0Nov 13, 2013Provider: repository / Type: Initial release
Revision 1.1Jan 29, 2014Group: Atomic model / Derived calculations / Other
Revision 1.2May 8, 2019Group: Data collection / Experimental preparation / Other
Category: database_PDB_rev / database_PDB_rev_record ...database_PDB_rev / database_PDB_rev_record / exptl_crystal_grow / pdbx_database_proc / pdbx_database_status
Item: _exptl_crystal_grow.method / _pdbx_database_status.recvd_author_approval
Revision 1.3May 22, 2019Group: Data collection / Experimental preparation / Category: exptl_crystal_grow / Item: _exptl_crystal_grow.temp
Revision 1.4Dec 20, 2023Group: Data collection / Database references ...Data collection / Database references / Other / Refinement description
Category: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / pdbx_database_status / pdbx_initial_refinement_model
Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _pdbx_database_status.status_code_sf
Remark 650 HELIX DETERMINATION METHOD: AUTHOR PROVIDED.
Remark 700 SHEET DETERMINATION METHOD: AUTHOR PROVIDED.

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Assembly

Deposited unit
A: KSHV LANA
B: KSHV LANA
C: KSHV LANA
D: KSHV LANA
E: KSHV LANA
F: KSHV LANA
G: KSHV LANA
H: KSHV LANA
I: KSHV LANA
J: KSHV LANA


Theoretical massNumber of molelcules
Total (without water)157,60210
Polymers157,60210
Non-polymers00
Water0
1
I: KSHV LANA
J: KSHV LANA


Theoretical massNumber of molelcules
Total (without water)31,5202
Polymers31,5202
Non-polymers00
Water0
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area4130 Å2
ΔGint-30.4 kcal/mol
Surface area13050 Å2
MethodPISA
2
C: KSHV LANA
D: KSHV LANA


Theoretical massNumber of molelcules
Total (without water)31,5202
Polymers31,5202
Non-polymers00
Water0
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area4380 Å2
ΔGint-28.6 kcal/mol
Surface area13040 Å2
MethodPISA
3
A: KSHV LANA
B: KSHV LANA


Theoretical massNumber of molelcules
Total (without water)31,5202
Polymers31,5202
Non-polymers00
Water0
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area4200 Å2
ΔGint-28.6 kcal/mol
Surface area13070 Å2
MethodPISA
4
G: KSHV LANA
H: KSHV LANA


Theoretical massNumber of molelcules
Total (without water)31,5202
Polymers31,5202
Non-polymers00
Water0
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area3870 Å2
ΔGint-27.3 kcal/mol
Surface area13070 Å2
MethodPISA
5
E: KSHV LANA
F: KSHV LANA


Theoretical massNumber of molelcules
Total (without water)31,5202
Polymers31,5202
Non-polymers00
Water0
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area4110 Å2
ΔGint-28.4 kcal/mol
Surface area13200 Å2
MethodPISA
Unit cell
Length a, b, c (Å)76.790, 100.290, 214.560
Angle α, β, γ (deg.)90.00, 90.00, 90.00
Int Tables number19
Space group name H-MP212121
Noncrystallographic symmetry (NCS)NCS oper:
IDCodeMatrixVector
1given(-0.99757, 0.03583, 0.05983), (0.04177, -0.3801, 0.924), (0.05585, 0.92425, 0.37768)60.53185, -189.58101, 124.63594
2given(0.96999, -0.23561, -0.0601), (-0.20506, 0.65977, 0.72295), (-0.13068, 0.71357, -0.68828)80.22688, -144.99168, 359.20197
3given(0.95005, -0.03288, -0.31035), (0.29737, 0.39712, 0.86825), (0.0947, -0.91718, 0.38706)60.54406, -193.27036, 131.91946
4given(0.93546, 0.32243, 0.14473), (0.35107, -0.80055, -0.48566), (-0.04072, 0.50513, -0.86208)-35.31052, 93.23947, 389.81113
5given(-0.91296, 0.07138, 0.40176), (-0.40757, -0.11146, -0.90635), (-0.01991, -0.9912, 0.13085)-20.10275, 206.74512, 186.76468
6given(0.81914, 0.34501, -0.45823), (0.55757, -0.66645, 0.49493), (-0.13463, -0.66091, -0.73829)87.86293, -123.24555, 374.43887
7given(-0.8239, -0.53492, 0.18723), (-0.56114, 0.72364, -0.40182), (0.07946, -0.43612, -0.89637)15.62117, 99.15219, 399.28619
8given(0.99248, -0.09851, 0.07261), (0.0949, 0.24491, -0.96489), (0.07727, 0.96453, 0.25241)-25.54868, 198.31477, 152.46596
9given(-0.9893, 0.14457, 0.01988), (-0.14593, -0.98054, -0.1313), (0.00051, -0.13279, 0.99114)57.8303, 37.46007, 4.85199

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Components

#1: Protein
KSHV LANA


Mass: 15760.201 Da / Num. of mol.: 10 / Fragment: C-TERMINAL DOMAIN, RESIDUES 1013-1149
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) HUMAN HERPESVIRUS 8 TYPE M / Production host: ESCHERICHIA COLI (E. coli) / Strain (production host): BL21(DE3) / References: UniProt: Q76SB0

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Experimental details

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Experiment

ExperimentMethod: X-RAY DIFFRACTION / Number of used crystals: 1

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Sample preparation

CrystalDensity Matthews: 2.63 Å3/Da / Density % sol: 53.17 % / Description: NONE
Crystal growTemperature: 293 K / Method: vapor diffusion, hanging drop / pH: 7.6
Details: 1.5 UL OF 0.8 MM PROTEIN IN 5 MM BISTRIS, PH 6.5, 200 MM LICL, 4 MM DTT WERE ADDED TO 1.5 UL OF 0.2 M LITHIUM CITRATE, PH 7.6, 20 % (W/V) PEG 3350. THE MIXTURE WAS INCUBATED AT 20 DEGREE ...Details: 1.5 UL OF 0.8 MM PROTEIN IN 5 MM BISTRIS, PH 6.5, 200 MM LICL, 4 MM DTT WERE ADDED TO 1.5 UL OF 0.2 M LITHIUM CITRATE, PH 7.6, 20 % (W/V) PEG 3350. THE MIXTURE WAS INCUBATED AT 20 DEGREE CENTIGRADE IN A HANGING DROP SETUP. CRYSTALS GREW IN A FEW DAYS AND WERE CRYO-PROTECTED BY SHORT SOAKING IN 0.2 M LITHIUM CITRATE, PH 7.6, 20 % (W/V) PEG 3350, 30 % (V/V) GLYCEROL.

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Data collection

DiffractionMean temperature: 100 K
Diffraction sourceSource: ROTATING ANODE / Type: RIGAKU MICROMAX-007 HF / Wavelength: 1.54181
DetectorType: RIGAKU-MSC SATURN 944 PLUS / Detector: CCD / Date: Oct 3, 2012 / Details: MIRRORS
RadiationMonochromator: RIGAKU VARIMAX / Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelengthWavelength: 1.54181 Å / Relative weight: 1
ReflectionResolution: 3.2→90 Å / Num. obs: 27442 / % possible obs: 97.5 % / Observed criterion σ(I): 2 / Redundancy: 3.45 % / Biso Wilson estimate: 47.43 Å2 / Rmerge(I) obs: 0.19 / Net I/σ(I): 7.67
Reflection shellResolution: 3.2→3.39 Å / Redundancy: 3.37 % / Rmerge(I) obs: 0.61 / Mean I/σ(I) obs: 2.03 / % possible all: 95.1

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Processing

Software
NameVersionClassification
PHENIX(PHENIX.REFINE)refinement
XDSdata reduction
XSCALEdata scaling
PHASERphasing
RefinementMethod to determine structure: MOLECULAR REPLACEMENT
Starting model: PDB ENTRY 2YPY
Resolution: 3.199→45.427 Å / SU ML: 0.4 / σ(F): 1.99 / Phase error: 24.37 / Stereochemistry target values: ML
RfactorNum. reflection% reflection
Rfree0.2651 1371 5 %
Rwork0.2177 --
obs0.2201 27435 97.56 %
Solvent computationShrinkage radii: 0.9 Å / VDW probe radii: 1.11 Å / Solvent model: FLAT BULK SOLVENT MODEL
Displacement parametersBiso mean: 50.7 Å2
Refinement stepCycle: LAST / Resolution: 3.199→45.427 Å
ProteinNucleic acidLigandSolventTotal
Num. atoms10837 0 0 0 10837
Refine LS restraints
Refine-IDTypeDev idealNumber
X-RAY DIFFRACTIONf_bond_d0.00311223
X-RAY DIFFRACTIONf_angle_d0.73415234
X-RAY DIFFRACTIONf_dihedral_angle_d11.2924282
X-RAY DIFFRACTIONf_chiral_restr0.0541508
X-RAY DIFFRACTIONf_plane_restr0.0041995
LS refinement shell
Resolution (Å)Rfactor RfreeNum. reflection RfreeRfactor RworkNum. reflection RworkRefine-ID% reflection obs (%)
3.1992-3.31350.33181280.29172419X-RAY DIFFRACTION93
3.3135-3.44610.29131370.25442600X-RAY DIFFRACTION99
3.4461-3.60290.26041380.25872627X-RAY DIFFRACTION100
3.6029-3.79280.29381370.2472600X-RAY DIFFRACTION99
3.7928-4.03030.29131380.23792641X-RAY DIFFRACTION99
4.0303-4.34120.26631370.2072601X-RAY DIFFRACTION98
4.3412-4.77770.26951380.18722632X-RAY DIFFRACTION98
4.7777-5.4680.23981390.19122631X-RAY DIFFRACTION99
5.468-6.88530.2451400.20012657X-RAY DIFFRACTION98
6.8853-45.4320.2181390.17642656X-RAY DIFFRACTION93
Refinement TLS params.

Method: refined / Refine-ID: X-RAY DIFFRACTION

IDL112)L122)L132)L222)L232)L332)S11 (Å °)S12 (Å °)S13 (Å °)S21 (Å °)S22 (Å °)S23 (Å °)S31 (Å °)S32 (Å °)S33 (Å °)T112)T122)T132)T222)T232)T332)Origin x (Å)Origin y (Å)Origin z (Å)
11.257-0.42771.42471.9121-0.71622.1033-0.0722-0.1269-0.08740.53980.25650.60020.4635-0.2265-0.1590.1158-0.0051-0.06320.3217-0.08940.517130.34-30.4542183.0035
21.3981-0.48760.44693.0871-0.13582.6479-0.18160.05930.3769-0.28190.1168-0.10050.0129-0.11670.06850.20070.0016-0.05520.3035-0.00230.308936.6828-23.4474182.8836
31.6006-0.54451.35952.289-0.00531.227-0.38840.24950.1163-0.6123-0.2271-0.65390.51060.63790.56890.5446-0.06860.19960.7268-0.00720.49144.4616-16.4008163.6105
40.635-1.45390.36843.7301-0.53781.83170.14740.35320.24330.0472-0.1477-0.9163-0.86061.37420.12350.449-0.09420.05610.7096-0.01560.419141.8392-7.6234155.9914
52.22270.4891-0.79021.44321.83866.0710.2463-0.2550.424-0.80110.2107-0.2966-0.39970.3110.13850.3940.1947-0.12030.3470.03230.433540.13460.5657165.4068
60.6432-0.8913-0.43464.3582-0.23310.4970.37030.24260.5998-0.2715-0.617-0.6464-0.27270.94650.36550.51020.0699-0.17730.91990.05080.381849.595-5.3309179.1412
71.0134-0.2033-1.01031.5816-0.02461.86180.0314-0.0712-0.2336-0.5194-0.3436-0.0744-0.2818-0.00390.15680.35270.006-0.12560.20040.0240.335234.5007-11.2805169.1172
80.3966-0.00230.26330.62690.32160.3894-0.0778-0.29830.02490.46-0.20450.55640.855-0.56240.11330.4266-0.06360.02420.4553-0.03290.300421.1375-24.4946175.1451
90.1405-0.3006-0.13261.10990.14850.19040.15070.09760.1469-0.35140.2079-0.2298-0.341-0.00950.09010.56050.1161-0.24270.1433-0.26210.420134.6091-4.3906173.7479
102.2972-1.560.65762.1028-1.78511.909-0.2734-0.3268-0.2990.14550.23610.5299-0.51490.0461-0.07950.4339-0.0893-0.18180.1766-0.09170.480935.6823-9.2373176.2976
110.14990.06470.52520.05460.06144.11930.18510.19080.03840.69160.17950.0323-0.00951.2174-0.17950.72820.23820.13090.8329-0.16430.357752.9543-45.2453211.3298
120.1920.21750.07323.12350.21055.32750.00050.204-0.0005-0.00580.3202-0.53360.99380.29260.22170.17810.07950.12350.49370.07450.321147.4038-38.9282199.651
132.36610.9124-0.98750.4736-0.60262.0339-0.27340.00550.0197-0.29770.4578-0.29220.03510.5323-0.17740.4539-0.16890.05960.4079-0.10470.790452.9916-25.1358211.394
140.5244-0.78630.81032.1293-0.44721.97930.3862-0.1416-0.2351-0.2378-0.04650.07570.4922-0.32580.12620.2455-0.04930.0380.2366-0.05670.404738.4491-41.637210.4322
150.0669-0.0673-0.23810.10440.15630.9176-0.01730.0245-0.0740.24010.30480.00560.11910.40290.26520.55060.1013-0.15240.4307-0.04650.008745.7986-38.4583211.7775
161.64850.026-0.70772.0025-0.01132.0049-0.41260.16190.15990.4947-0.11240.16310.24320.09840.16280.3057-0.02740.00670.269-0.10640.242533.7691-39.5955218.679
172.1485-1.4726-1.37141.24041.09122.6260.0169-0.01930.0797-0.4457-0.30640.801-0.2287-0.41790.14870.3341-0.0173-0.01640.15860.010.266636.8863-35.9682201.8003
183.967-1.65540.26862.51431.41442.61220.3039-0.66380.69780.16160.4438-0.91380.03960.26970.16370.31820.0197-0.03170.54240.10820.289644.6944-28.3649217.2338
192.49030.10971.43471.5157-0.16042.82850.0486-0.64510.17460.7172-0.02210.08080.2832-0.43290.05370.97180.0024-0.17960.37210.0947-0.020231.3004-46.8251229.107
200.8157-0.09-0.45691.44590.74453.18970.2614-0.3175-0.23420.3323-0.1202-0.12520.6709-0.0613-0.1380.9971-0.0155-0.07470.5219-0.02310.006334.0754-45.2484241.2822
212.9389-0.01620.53913.38810.09674.1280.4213-0.03330.06340.2204-0.05590.41350.0735-0.2109-0.08920.55490.0278-0.02810.2695-0.08280.311931.5-33.4157240.7505
220.925-0.1453-0.29130.1028-0.1450.89940.119-0.07810.0334-0.12130.06490.12730.0722-0.3517-0.02930.17250.0317-0.15640.5045-0.16140.650422.3231-29.7283226.0448
232.72721.202-0.14082.01710.27692.9388-0.0381-0.11130.28460.1592-0.27090.111-0.23250.69360.26540.4085-0.0214-0.08060.37650.04650.22843.3693-32.2974227.386
240.5449-0.2742-0.19870.8350.90861.54970.0829-0.0734-0.15060.1899-0.33550.21050.3574-0.26060.02410.81990.1204-0.01970.0824-0.2335-0.005642.2041-41.1475234.2331
250.8712-0.0626-0.28010.77810.07750.7590.1936-0.0503-0.08180.15710.023-0.1593-0.316-0.31580.30160.42560.24960.1519-0.5367-0.4795-0.06334.5965-37.9885229.2837
261.23870.49220.4061.9336-0.47062.17360.13910.27420.1327-0.4548-0.037-0.13770.55480.7508-0.12420.37420.098-0.03720.4474-0.00920.232746.3537-36.4106221.995
270.95830.46650.14230.55040.89972.1282-0.29980.09870.12010.0848-0.12350.2765-0.10280.08180.13220.39240.0260.00420.2848-0.02660.289837.9599-26.7406235.5302
280.4151-0.6875-0.77762.41640.38992.1159-0.3747-0.01920.04350.41210.3425-0.24920.20640.3079-0.00440.2757-0.1820.20060.6782-0.13870.28744.5119-29.7357233.1561
293.4196-0.4871.13123.35790.3673.94520.0050.1898-0.06040.06150.2630.65810.4028-1.0769-0.22340.2121-0.0581-0.03780.54490.16310.314726.39-33.0397218.1032
300.2915-0.1977-0.62690.9043-0.46912.33340.15640.2439-0.4546-0.18830.15440.70480.0531-0.99990.07350.3685-0.0699-0.17860.61410.18190.56656.468942.5916213.6297
310.13860.0940.01860.5572-1.00172.2344-0.28420.3382-0.0875-0.54670.35520.97390.3417-0.52590.00780.6363-0.1417-0.2280.7776-0.02481.33055.62225.0254214.5639
322.8646-1.0354-0.66213.25570.39183.10750.191-0.00080.16370.1842-0.11790.2010.3478-0.295-0.05750.3236-0.02110.0830.21140.00350.296217.864639.4244221.6804
331.2002-0.83310.51272.6295-1.22323.01960.010.3744-0.2523-0.208-0.00830.38290.2358-0.2408-0.09890.346-0.0217-0.01660.3994-0.00250.443417.334834.283214.2911
343.6085-4.62081.50256.4455-1.82251.77010.08110.5191-0.1926-0.1322-0.4572-0.39540.5631.09150.25480.5091-0.16010.05360.6289-0.06550.474221.031245.0941234.8923
354.2431-2.54912.20434.4029-2.25352.9956-0.3690.0807-0.1310.2498-0.3018-0.4136-0.12440.11680.36630.7557-0.0610.37440.6314-0.1550.542927.797238.4178249.1
362.7914-0.31680.2352.6548-0.76772.65030.00970.0322-0.35060.1229-0.3287-0.4469-0.33890.61350.0470.5176-0.06470.12560.5270.08140.356424.889227.2844246.5423
371.7674-0.4477-0.04390.9023-0.13650.22580.21250.1781-0.13850.19710.198-0.05250.17260.592-0.08110.4030.24230.1431.0040.14051.125135.238928.256231.3348
383.08221.033-0.33021.630.89711.7076-0.35290.3557-0.26470.0234-0.0487-0.10.1058-0.18210.20990.302-0.04350.07660.3569-0.0390.471817.483432.005236.928
390.61790.3431-1.21783.70090.79443.34440.03211.09870.054-0.5386-0.12480.12990.1952-0.81450.26020.5296-0.18610.03110.56560.03240.44710.814332.8705228.5002
400.24620.32970.23381.846-0.13522.54070.0123-0.17-0.8852-0.0044-0.03630.16090.2375-0.31280.06210.6639-0.01060.15020.38880.11030.53517.392121.6101240.8788
411.80660.3832-1.64392.6843-1.14692.6238-0.11770.1773-0.8373-0.2333-0.1691-0.23440.1419-0.33030.04750.4654-0.09430.07590.40760.10110.568626.006229.57225.976
420.0303-0.1746-0.14091.1140.38870.8445-0.1360.3446-0.8734-0.1468-0.3310.03720.0253-0.28280.23180.4546-0.00150.20790.25570.03120.516216.6987-0.1118263.5149
432.8602-0.6169-1.0451.63390.73672.8572-0.33360.08750.3176-0.1585-0.52150.0183-0.4552-0.61810.03310.37890.09060.05280.2750.02740.509714.540811.5643255.1151
441.07490.50840.99250.41930.37430.97170.0482-0.35090.0392-0.0244-0.39120.3167-0.2244-0.4419-0.1440.00960.1285-0.22250.9680.08820.468411.4072-3.316244.4886
451.8329-0.5194-1.09331.0310.09231.4631-0.0745-0.03170.26650.32070.22810.2357-0.2473-0.0446-0.11080.27190.01980.06690.2067-0.00750.368725.20284.133254.9341
464.5608-0.01471.56322.7330.43060.60470.06130.1790.2036-0.06630.1076-0.99470.2291.25720.15010.09890.17360.03950.6608-00.797642.6334-1.6947252.2585
470.40.9069-0.37092.0893-0.99530.9456-0.3446-0.0175-0.4124-0.28110.0899-0.71570.74030.8898-0.04360.56730.43790.24580.9285-0.35910.793945.72921.5858255.9416
480.1684-0.3094-0.24891.88540.14250.340.16310.08280.0054-0.50540.0306-0.2543-0.1774-0.1819-0.05660.470.02120.1250.37490.01430.277522.49657.3202247.778
490.03960.02230.01350.00970.0122-0.00060.445-0.26670.65680.30890.3307-0.3564-0.410.0685-0.54150.4949-0.00830.1340.39390.0050.677229.139417.3736254.7605
503.8972.8222-0.18715.32380.38632.14190.24120.0722-0.0349-0.18240.06790.1118-0.1256-0.0830.02310.23720.10610.080.24280.15820.521421.6637-5.4547245.3909
510.8412-0.6613-0.6892.86840.55982.16010.07320.38290.05930.03820.5334-0.53460.1520.3327-0.05970.23770.0969-0.33810.726-0.24510.842545.4891-9.7044258.6342
521.9338-0.02520.19731.25090.39014.40880.01790.0275-0.4004-0.03490.1743-0.2870.3920.9199-0.22490.38980.030.01480.4825-0.0950.333244.4523-20.3109248.7937
531.16731.5512-0.54342.1221-1.05581.7088-0.03460.13130.0411-0.2335-0.3189-0.7309-0.23430.54690.00330.4291-0.04570.11040.98840.18220.384544.7719-4.3357239.1938
545.5726-0.3174-0.70061.55831.11160.9193-0.1062-0.46110.34290.09740.378-0.02170.5126-0.0007-0.180.21250.02930.00750.2364-0.01680.142834.992-13.3086252.274
550.5872-0.32410.2491.3461-0.00721.04370.0769-0.40810.03130.32870.42270.3276-0.1597-0.38330.81290.33230.04660.39870.8113-0.24690.054419.3014-8.6285258.219
566.71523.2432-1.9592.6382-0.86990.62890.2315-0.26420.40540.3203-0.19340.47780.0626-0.401-0.36350.35810.10250.27770.54510.1170.343717.0834-14.2774260.2976
571.1842-0.7377-0.30431.54631.20980.97120.1460.1536-0.2654-0.1628-0.3984-0.22290.1860.03340.19270.30110.01590.06510.3134-0.04670.232833.9647-17.5256246.3209
581.52421.6253-0.66225.7011-0.99471.97020.09260.0643-0.0625-0.1162-0.2615-0.44340.11380.41430.09730.2248-0.07570.09520.3878-0.09430.361432.716-3.5598242.7511
591.172-0.8023-1.16311.83440.35632.07870.1580.5018-0.5993-0.4566-0.40450.79240.3516-0.24130.34921.2428-0.1532-0.53320.5116-0.24930.556415.758723.3063166.4786
603.7108-0.45641.0094.37241.10052.9666-0.37430.2899-0.3525-0.6453-0.42590.99360.0797-0.38290.30780.70130.1875-0.14110.5459-0.17030.468222.559810.6972167.5531
610.81010.32140.96820.4063-0.14112.13970.33650.2107-0.50140.20390.21620.55970.221-0.7791-0.00410.3058-0.2160.27490.8111-0.25791.377311.450111.7995183.5627
621.0704-0.5820.8150.73260.30791.95570.0806-0.45850.1317-0.85950.1610.0482-0.2594-0.2485-0.09710.82630.1462-0.15050.3272-0.21460.401225.798521.2548174.0784
631.26630.536-0.43442.313-1.35280.82310.14550.0270.4525-0.01180.5039-0.8062-1.07211.036-0.39011.12890.0127-0.04290.7677-0.27940.631537.364735.1049181.872
641.8461-1.29210.67073.94361.55532.70370.12170.2343-0.1228-0.23030.35310.025-0.26710.1031-0.2380.47210.0352-0.04560.3268-0.02630.37528.624414.1104175.9958
656.6483-1.704-0.37443.62990.96474.12920.4594-0.393-0.27950.06750.04490.4609-0.0353-0.7239-0.17160.4415-0.02080.02510.3672-0.0050.496918.143319.5575185.7241
661.8676-0.8276-2.05982.47562.02184.1337-0.03070.0035-0.5533-0.95750.4411-0.41990.08030.8206-0.45770.6518-0.0194-0.05810.3519-0.09180.811831.482843.6572183.4169
671.45420.256-0.45081.7782-0.94451.1557-0.12780.3470.1254-0.2527-0.3455-0.1706-0.19420.08660.11740.5910.05390.01240.3586-0.14230.460224.507844.9803195.4086
680.28230.1283-0.29622.16420.31340.43190.410.51520.04150.1735-0.02890.01440.56310.2083-0.36910.28370.0832-0.22390.7331-0.28480.786936.333330.8338197.6075
690.9173-0.0727-0.28271.5860.37350.74970.44050.1080.3437-0.21880.10180.2609-0.1897-0.00960.47720.8310.3337-0.1290.0754-0.17810.471318.888835.6646186.6403
700.18930.2779-0.04650.51870.22980.8214-0.13450.13430.0397-0.07870.2617-0.2375-0.19110.3443-0.13850.71110.0604-0.14450.6468-0.27080.165629.330736.5395189.9383
710.26210.0207-0.2020.1626-0.11570.23390.18650.5218-0.4946-0.4996-0.03630.41940.3609-0.33210.20471.03810.1872-0.68820.6167-0.47220.574211.682626.5012175.5898
721.0305-0.02920.24891.09230.29921.9645-0.0439-0.00150.2314-0.09490.14690.0509-0.05090.5341-0.04640.37530.0752-0.01230.3862-0.01860.324121.512732.6759194.2654
731.0104-1.1083-0.91631.21280.99820.83090.0243-0.07490.0221-0.0527-0.00510.024-0.1402-0.01690.09180.40060.1447-0.14910.5451-0.06630.51610.51641.3663193.0489
744.2221-1.0223-1.19313.4033-0.03642.8580.0061-0.07660.3094-0.3399-0.0347-0.6973-0.26660.3172-0.07160.54630.0050.02640.3761-0.09470.453830.483724.8132189.5769
Refinement TLS group
IDRefine-IDRefine TLS-IDSelection details
1X-RAY DIFFRACTION1CHAIN A AND (RESID 1014 THROUGH 1074 )
2X-RAY DIFFRACTION2CHAIN A AND (RESID 1075 THROUGH 1148 )
3X-RAY DIFFRACTION3CHAIN B AND (RESID 1014 THROUGH 1023 )
4X-RAY DIFFRACTION4CHAIN B AND (RESID 1024 THROUGH 1031 )
5X-RAY DIFFRACTION5CHAIN B AND (RESID 1032 THROUGH 1046 )
6X-RAY DIFFRACTION6CHAIN B AND (RESID 1047 THROUGH 1055 )
7X-RAY DIFFRACTION7CHAIN B AND (RESID 1056 THROUGH 1087 )
8X-RAY DIFFRACTION8CHAIN B AND (RESID 1088 THROUGH 1099 )
9X-RAY DIFFRACTION9CHAIN B AND (RESID 1100 THROUGH 1125 )
10X-RAY DIFFRACTION10CHAIN B AND (RESID 1126 THROUGH 1147 )
11X-RAY DIFFRACTION11CHAIN C AND (RESID 1014 THROUGH 1028 )
12X-RAY DIFFRACTION12CHAIN C AND (RESID 1029 THROUGH 1046 )
13X-RAY DIFFRACTION13CHAIN C AND (RESID 1047 THROUGH 1055 )
14X-RAY DIFFRACTION14CHAIN C AND (RESID 1056 THROUGH 1074 )
15X-RAY DIFFRACTION15CHAIN C AND (RESID 1075 THROUGH 1087 )
16X-RAY DIFFRACTION16CHAIN C AND (RESID 1088 THROUGH 1108 )
17X-RAY DIFFRACTION17CHAIN C AND (RESID 1109 THROUGH 1132 )
18X-RAY DIFFRACTION18CHAIN C AND (RESID 1133 THROUGH 1148 )
19X-RAY DIFFRACTION19CHAIN D AND (RESID 1014 THROUGH 1023 )
20X-RAY DIFFRACTION20CHAIN D AND (RESID 1024 THROUGH 1031 )
21X-RAY DIFFRACTION21CHAIN D AND (RESID 1032 THROUGH 1046 )
22X-RAY DIFFRACTION22CHAIN D AND (RESID 1047 THROUGH 1055 )
23X-RAY DIFFRACTION23CHAIN D AND (RESID 1056 THROUGH 1064 )
24X-RAY DIFFRACTION24CHAIN D AND (RESID 1065 THROUGH 1074 )
25X-RAY DIFFRACTION25CHAIN D AND (RESID 1075 THROUGH 1087 )
26X-RAY DIFFRACTION26CHAIN D AND (RESID 1088 THROUGH 1108 )
27X-RAY DIFFRACTION27CHAIN D AND (RESID 1109 THROUGH 1125 )
28X-RAY DIFFRACTION28CHAIN D AND (RESID 1126 THROUGH 1138 )
29X-RAY DIFFRACTION29CHAIN D AND (RESID 1139 THROUGH 1148 )
30X-RAY DIFFRACTION30CHAIN E AND (RESID 1014 THROUGH 1045 )
31X-RAY DIFFRACTION31CHAIN E AND (RESID 1046 THROUGH 1055 )
32X-RAY DIFFRACTION32CHAIN E AND (RESID 1056 THROUGH 1108 )
33X-RAY DIFFRACTION33CHAIN E AND (RESID 1109 THROUGH 1148 )
34X-RAY DIFFRACTION34CHAIN F AND (RESID 1012 THROUGH 1021 )
35X-RAY DIFFRACTION35CHAIN F AND (RESID 1022 THROUGH 1028 )
36X-RAY DIFFRACTION36CHAIN F AND (RESID 1029 THROUGH 1046 )
37X-RAY DIFFRACTION37CHAIN F AND (RESID 1047 THROUGH 1055 )
38X-RAY DIFFRACTION38CHAIN F AND (RESID 1056 THROUGH 1087 )
39X-RAY DIFFRACTION39CHAIN F AND (RESID 1088 THROUGH 1108 )
40X-RAY DIFFRACTION40CHAIN F AND (RESID 1109 THROUGH 1132 )
41X-RAY DIFFRACTION41CHAIN F AND (RESID 1133 THROUGH 1148 )
42X-RAY DIFFRACTION42CHAIN G AND (RESID 1014 THROUGH 1028 )
43X-RAY DIFFRACTION43CHAIN G AND (RESID 1029 THROUGH 1045 )
44X-RAY DIFFRACTION44CHAIN G AND (RESID 1046 THROUGH 1055 )
45X-RAY DIFFRACTION45CHAIN G AND (RESID 1056 THROUGH 1087 )
46X-RAY DIFFRACTION46CHAIN G AND (RESID 1088 THROUGH 1092 )
47X-RAY DIFFRACTION47CHAIN G AND (RESID 1093 THROUGH 1099 )
48X-RAY DIFFRACTION48CHAIN G AND (RESID 1100 THROUGH 1125 )
49X-RAY DIFFRACTION49CHAIN G AND (RESID 1126 THROUGH 1132 )
50X-RAY DIFFRACTION50CHAIN G AND (RESID 1133 THROUGH 1148 )
51X-RAY DIFFRACTION51CHAIN H AND (RESID 1014 THROUGH 1028 )
52X-RAY DIFFRACTION52CHAIN H AND (RESID 1029 THROUGH 1045 )
53X-RAY DIFFRACTION53CHAIN H AND (RESID 1046 THROUGH 1055 )
54X-RAY DIFFRACTION54CHAIN H AND (RESID 1056 THROUGH 1084 )
55X-RAY DIFFRACTION55CHAIN H AND (RESID 1085 THROUGH 1094 )
56X-RAY DIFFRACTION56CHAIN H AND (RESID 1095 THROUGH 1099 )
57X-RAY DIFFRACTION57CHAIN H AND (RESID 1100 THROUGH 1132 )
58X-RAY DIFFRACTION58CHAIN H AND (RESID 1133 THROUGH 1146 )
59X-RAY DIFFRACTION59CHAIN I AND (RESID 1014 THROUGH 1028 )
60X-RAY DIFFRACTION60CHAIN I AND (RESID 1029 THROUGH 1046 )
61X-RAY DIFFRACTION61CHAIN I AND (RESID 1047 THROUGH 1055 )
62X-RAY DIFFRACTION62CHAIN I AND (RESID 1056 THROUGH 1087 )
63X-RAY DIFFRACTION63CHAIN I AND (RESID 1088 THROUGH 1099 )
64X-RAY DIFFRACTION64CHAIN I AND (RESID 1100 THROUGH 1132 )
65X-RAY DIFFRACTION65CHAIN I AND (RESID 1133 THROUGH 1148 )
66X-RAY DIFFRACTION66CHAIN J AND (RESID 1014 THROUGH 1028 )
67X-RAY DIFFRACTION67CHAIN J AND (RESID 1029 THROUGH 1042 )
68X-RAY DIFFRACTION68CHAIN J AND (RESID 1043 THROUGH 1055 )
69X-RAY DIFFRACTION69CHAIN J AND (RESID 1056 THROUGH 1074 )
70X-RAY DIFFRACTION70CHAIN J AND (RESID 1075 THROUGH 1084 )
71X-RAY DIFFRACTION71CHAIN J AND (RESID 1085 THROUGH 1098 )
72X-RAY DIFFRACTION72CHAIN J AND (RESID 1099 THROUGH 1125 )
73X-RAY DIFFRACTION73CHAIN J AND (RESID 1126 THROUGH 1132 )
74X-RAY DIFFRACTION74CHAIN J AND (RESID 1133 THROUGH 1148 )

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