Entry Database : PDB / ID : 2uut Structure visualization Downloads & linksTitle The 2.4 angstrom resolution structure of the D346G mutant of the Sapporo Virus RdRp polymerase ComponentsRNA-DIRECTED RNA POLYMERASE Details Keywords HYDROLASE / NUCLEOTIDE-BINDING / NUCLEOTIDYLTRANSFERASE / COVALENT PROTEIN-RNA LINKAGE / POLYMERASE / RNA ELONGATION / TRANSFERASE ACTIVITY / MUTANT / CAPSID PROTEIN / RNA REPLICATION / STRUCTURAL PROTEIN / PROTEASE / HELICASE / TRANSFERASE / RNA-DIRECTED RNA POLYMERASE / POLYPROTEIN / ATP-BINDING / THIOL PROTEASEFunction / homology Function and homology informationFunction Domain/homology Component
calicivirin / ribonucleoside triphosphate phosphatase activity / viral capsid / nucleoside-triphosphate phosphatase / DNA replication / host cell cytoplasm / RNA helicase activity / RNA-directed RNA polymerase / viral RNA genome replication / cysteine-type endopeptidase activity ... calicivirin / ribonucleoside triphosphate phosphatase activity / viral capsid / nucleoside-triphosphate phosphatase / DNA replication / host cell cytoplasm / RNA helicase activity / RNA-directed RNA polymerase / viral RNA genome replication / cysteine-type endopeptidase activity / RNA-dependent RNA polymerase activity / DNA-templated transcription / proteolysis / RNA binding / ATP binding Similarity search - Function : / Viral genome-linked protein / Caliciviridae (CV) 3C-like protein profile. / Peptidase C24, Calicivirus polyprotein Orf1 / 2C endopeptidase (C24) cysteine protease family / Single alpha-helices involved in coiled-coils or other helix-helix interfaces - #3230 / Norovirus peptidase C37 / Southampton virus-type processing peptidase / Mitochondrial Import Receptor Subunit Tom20; Chain A - #20 / Mitochondrial Import Receptor Subunit Tom20; Chain A ... : / Viral genome-linked protein / Caliciviridae (CV) 3C-like protein profile. / Peptidase C24, Calicivirus polyprotein Orf1 / 2C endopeptidase (C24) cysteine protease family / Single alpha-helices involved in coiled-coils or other helix-helix interfaces - #3230 / Norovirus peptidase C37 / Southampton virus-type processing peptidase / Mitochondrial Import Receptor Subunit Tom20; Chain A - #20 / Mitochondrial Import Receptor Subunit Tom20; Chain A / Helicase/polymerase/peptidase polyprotein, Calicivirus-type / Calicivirus coat protein / Calicivirus coat protein / Single alpha-helices involved in coiled-coils or other helix-helix interfaces / Reverse transcriptase/Diguanylate cyclase domain / Helicase, superfamily 3, single-stranded RNA virus / Superfamily 3 helicase of positive ssRNA viruses domain profile. / Helicase, superfamily 3, single-stranded DNA/RNA virus / RNA helicase / Helix non-globular / Picornavirus/Calicivirus coat protein / Special / Viral coat protein subunit / RNA-directed RNA polymerase, C-terminal domain / Viral RNA-dependent RNA polymerase / Reverse transcriptase/Diguanylate cyclase domain / Alpha-Beta Plaits / RNA-directed RNA polymerase, catalytic domain / RdRp of positive ssRNA viruses catalytic domain profile. / Peptidase S1, PA clan / DNA/RNA polymerase superfamily / Up-down Bundle / P-loop containing nucleoside triphosphate hydrolase / 2-Layer Sandwich / Mainly Alpha / Alpha Beta Similarity search - Domain/homologyBiological species SAPPORO VIRUSMethod X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution : 2.4 Å DetailsAuthors Fullerton, S.W.B. / Robel, I. / Schuldt, L. / Gebhardt, J. / Tucker, P. / Rohayem, J. CitationJournal : To be Published Title : The 2.4 Angstrom Resolution Structure of the D346G Mutant of the Sapporo Virus Rdrp PolymeraseAuthors : Fullerton, S.W.B. / Robel, I. / Schuldt, L. / Gebhardt, J. / Tucker, P. / Rohayem, J. History Deposition Mar 7, 2007 Deposition site : PDBE / Processing site : PDBERevision 1.0 May 1, 2007 Provider : repository / Type : Initial releaseRevision 1.1 May 8, 2011 Group : Version format complianceRevision 1.2 Jul 13, 2011 Group : Version format complianceRevision 1.3 Jul 24, 2019 Group : Data collection / Category : diffrn_source / Item : _diffrn_source.pdbx_synchrotron_siteRevision 1.4 Dec 13, 2023 Group : Data collection / Database references ... Data collection / Database references / Other / Refinement description Category : chem_comp_atom / chem_comp_bond ... chem_comp_atom / chem_comp_bond / database_2 / pdbx_database_status / pdbx_initial_refinement_model Item : _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _pdbx_database_status.status_code_sf
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