PDB-2r1d: Crystal structure of rat neurexin 1beta in the Ca2+ containing form

ID or keywords:

Entry

Database: PDB / ID: 2r1d

Title

Crystal structure of rat neurexin 1beta in the Ca2+ containing form

Components

Neurexin-1-beta

Keywords

CELL ADHESION / SPLICING / beta-sandwich

Function / homology

Function and homology information

protein-containing complex assembly involved in synapse maturation / cell-cell adhesion involved in synapse maturation / positive regulation of presynaptic active zone assembly / protein complex involved in cell-cell adhesion / guanylate kinase-associated protein clustering / positive regulation of neuromuscular synaptic transmission / neuroligin clustering involved in postsynaptic membrane assembly / neuron to neuron synapse / negative regulation of filopodium assembly / gephyrin clustering involved in postsynaptic density assembly ...protein-containing complex assembly involved in synapse maturation / cell-cell adhesion involved in synapse maturation / positive regulation of presynaptic active zone assembly / protein complex involved in cell-cell adhesion / guanylate kinase-associated protein clustering / positive regulation of neuromuscular synaptic transmission / neuroligin clustering involved in postsynaptic membrane assembly / neuron to neuron synapse / negative regulation of filopodium assembly / gephyrin clustering involved in postsynaptic density assembly / cerebellar granule cell differentiation / postsynaptic density protein 95 clustering / slit diaphragm / postsynaptic membrane assembly / synapse maturation / gamma-aminobutyric acid receptor clustering / presynaptic membrane assembly / neuroligin family protein binding / maintenance of synapse structure / synaptic vesicle clustering / receptor localization to synapse / neuron cell-cell adhesion / NMDA glutamate receptor clustering / inhibitory synapse / calcium-dependent cell-cell adhesion / protein localization to synapse / AMPA selective glutamate receptor signaling pathway / positive regulation of synapse assembly / NMDA selective glutamate receptor signaling pathway / heterophilic cell-cell adhesion / endocytic vesicle / axonal growth cone / positive regulation of synaptic transmission, glutamatergic / neuron projection morphogenesis / synapse assembly / excitatory synapse / cell adhesion molecule binding / cellular response to calcium ion / positive regulation of excitatory postsynaptic potential / positive regulation of synaptic transmission, GABAergic / positive regulation of protein localization to plasma membrane / neuromuscular junction / establishment of protein localization / positive regulation of neuron projection development / GABA-ergic synapse / calcium-dependent protein binding / transmembrane signaling receptor activity / presynaptic membrane / angiogenesis / nuclear membrane / signaling receptor binding / neuronal cell body / glutamatergic synapse / cell surface / endoplasmic reticulum / signal transduction / metal ion binding / plasma membrane
Similarity search - Function

Biological species

Rattus norvegicus (Norway rat)

Method

X-RAY DIFFRACTION /

SYNCHROTRON /

FOURIER SYNTHESIS / Resolution: 2.6 Å

Authors

Rudenko, G.

Citation

Journal: Structure / Year: 2008
Title: Regulation of Neurexin 1beta Tertiary Structure and Ligand Binding through Alternative Splicing
Authors: Shen, K.C. / Kuczynska, D.A. / Wu, I.J. / Murray, B.H. / Sheckler, L.R. / Rudenko, G.

History

Deposition	Aug 22, 2007	Deposition site: RCSB / Processing site: RCSB
Revision 1.0	Apr 1, 2008	Provider: repository / Type: Initial release
Revision 1.1	Jul 13, 2011	Group: Advisory / Version format compliance
Revision 1.2	Oct 25, 2017	Group: Refinement description / Category: software
Revision 1.3	Aug 30, 2023	Group: Data collection / Database references ...Data collection / Database references / Derived calculations / Refinement description Category: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / pdbx_struct_conn_angle / struct_conn / struct_ncs_dom_lim / struct_site Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession ..._database_2.pdbx_DOI / _database_2.pdbx_database_accession / _pdbx_struct_conn_angle.ptnr1_auth_seq_id / _pdbx_struct_conn_angle.ptnr3_auth_seq_id / _pdbx_struct_conn_angle.value / _struct_conn.pdbx_dist_value / _struct_conn.ptnr1_auth_asym_id / _struct_conn.ptnr1_auth_comp_id / _struct_conn.ptnr1_auth_seq_id / _struct_conn.ptnr1_label_asym_id / _struct_conn.ptnr1_label_atom_id / _struct_conn.ptnr1_label_comp_id / _struct_conn.ptnr1_label_seq_id / _struct_conn.ptnr2_auth_asym_id / _struct_conn.ptnr2_auth_comp_id / _struct_conn.ptnr2_auth_seq_id / _struct_conn.ptnr2_label_asym_id / _struct_conn.ptnr2_label_atom_id / _struct_conn.ptnr2_label_comp_id / _struct_ncs_dom_lim.beg_auth_comp_id / _struct_ncs_dom_lim.end_auth_comp_id / _struct_site.pdbx_auth_asym_id / _struct_site.pdbx_auth_comp_id / _struct_site.pdbx_auth_seq_id

Structure viewer	Molecule: MolmilJmol/JSmol

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Download

PDBx/mmCIF format	2r1d.cif.gz	310.9 KB	Display	PDBx/mmCIF format
PDB format	pdb2r1d.ent.gz	249 KB	Display	PDB format
PDBx/mmJSON format	2r1d.json.gz		Tree view	PDBx/mmJSON format
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Validation report

Arichive directory	https://data.pdbj.org/pub/pdb/validation_reports/r1/2r1d ftp://data.pdbj.org/pub/pdb/validation_reports/r1/2r1d	HTTPS FTP

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Related structure data

Related structure data	2r16C 2r1bC 1c4rS C: citing same article (ref.) S: Starting model for refinement
Similar structure data	3vkf-4 4cyu-2 1c4r-1 1c4r-4 3ud5-d 3twh-d 5w7o-d 4cyu-1 1c4r-3 1rao-d Search similar-shape structures by Omokage search (details) Search similar-shape structures by Omokage search (details) Search similar-shape structures by Omokage search (details) Search similar-shape structures by Omokage search (details) Search similar-shape structures by Omokage search (details) Search similar-shape structures by Omokage search (details) Search similar-shape structures by Omokage search (details) Search similar-shape structures by Omokage search (details) Search similar-shape structures by Omokage search (details) Search similar-shape structures by Omokage search (details) Similarity search - Function & homologyF&H Search Similarity search - FunctionF&H Search Similarity search - HomologyF&H Search

Related structure data

2r16C

2r1bC

1c4rS

C: citing same article (ref.)

S: Starting model for refinement

Similar structure data

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Links

PDB pages	PDBj / wwPDB / NCBI
Related items in Molecule of the Month	#92 - Aug 2007 Anabolic Steroids similarity (3)

Deposited unit

A: Neurexin-1-beta

B: Neurexin-1-beta

C: Neurexin-1-beta

D: Neurexin-1-beta

E: Neurexin-1-beta

F: Neurexin-1-beta

G: Neurexin-1-beta

H: Neurexin-1-beta

I: Neurexin-1-beta

W: Neurexin-1-beta

hetero molecules

243 kDa, 10 polymers
Search similar-shape structures of this assembly by Omokage search (details)

1

A: Neurexin-1-beta

defined by author&software
24.3 kDa, 1 polymers
Search similar-shape structures of this assembly by Omokage search (details)

2

B: Neurexin-1-beta

hetero molecules

defined by author&software
24.4 kDa, 1 polymers
Search similar-shape structures of this assembly by Omokage search (details)

3

C: Neurexin-1-beta

defined by author&software
24.3 kDa, 1 polymers
Search similar-shape structures of this assembly by Omokage search (details)

4

D: Neurexin-1-beta

hetero molecules

defined by author&software
24.4 kDa, 1 polymers
Search similar-shape structures of this assembly by Omokage search (details)

5

E: Neurexin-1-beta

defined by author&software
24.3 kDa, 1 polymers
Search similar-shape structures of this assembly by Omokage search (details)

6

F: Neurexin-1-beta

defined by author&software
24.3 kDa, 1 polymers
Search similar-shape structures of this assembly by Omokage search (details)

7

G: Neurexin-1-beta

defined by author&software
24.3 kDa, 1 polymers
Search similar-shape structures of this assembly by Omokage search (details)

8

H: Neurexin-1-beta

defined by author&software
24.3 kDa, 1 polymers
Search similar-shape structures of this assembly by Omokage search (details)

9

I: Neurexin-1-beta

hetero molecules

defined by author&software
24.4 kDa, 1 polymers
Search similar-shape structures of this assembly by Omokage search (details)

10

W: Neurexin-1-beta

defined by author&software
24.3 kDa, 1 polymers

Unit cell

Length a, b, c (Å)	116.683, 195.719, 103.867
Angle α, β, γ (deg.)	90.00, 90.00, 90.00
Int Tables number	18
Space group name H-M	P2₁2₁2

Noncrystallographic symmetry (NCS)

NCS domain:
NCS domain segments:

Ens-ID: 1 / Refine code: 4

Dom-ID	Component-ID	Beg auth comp-ID	Beg label comp-ID	End auth comp-ID	End label comp-ID	Auth asym-ID	Label asym-ID	Auth seq-ID	Label seq-ID
1	1	TYR	TYR	PHE	PHE	A	A	41 - 43	41 - 43
2	1	TYR	TYR	PHE	PHE	B	B	41 - 43	41 - 43
3	1	TYR	TYR	PHE	PHE	C	C	41 - 43	41 - 43
4	1	TYR	TYR	PHE	PHE	D	D	41 - 43	41 - 43
5	1	TYR	TYR	PHE	PHE	E	E	41 - 43	41 - 43
6	1	TYR	TYR	PHE	PHE	F	F	41 - 43	41 - 43
7	1	TYR	TYR	PHE	PHE	G	G	41 - 43	41 - 43
8	1	TYR	TYR	PHE	PHE	H	H	41 - 43	41 - 43
9	1	TYR	TYR	PHE	PHE	I	I	41 - 43	41 - 43
10	2	TYR	TYR	TRP	TRP	A	A	52 - 54	52 - 54
11	2	TYR	TYR	TRP	TRP	B	B	52 - 54	52 - 54
12	2	TYR	TYR	TRP	TRP	C	C	52 - 54	52 - 54
13	2	TYR	TYR	TRP	TRP	D	D	52 - 54	52 - 54
14	2	TYR	TYR	TRP	TRP	E	E	52 - 54	52 - 54
15	2	TYR	TYR	TRP	TRP	F	F	52 - 54	52 - 54
16	2	TYR	TYR	TRP	TRP	G	G	52 - 54	52 - 54
17	2	TYR	TYR	TRP	TRP	H	H	52 - 54	52 - 54
18	2	TYR	TYR	TRP	TRP	I	I	52 - 54	52 - 54
19	3	ARG	ARG	SER	SER	A	A	59 - 86	59 - 86
20	3	ARG	ARG	SER	SER	B	B	59 - 86	59 - 86
21	3	ARG	ARG	SER	SER	C	C	59 - 86	59 - 86
22	3	ARG	ARG	SER	SER	D	D	59 - 86	59 - 86
23	3	ARG	ARG	SER	SER	E	E	59 - 86	59 - 86
24	3	ARG	ARG	SER	SER	F	F	59 - 86	59 - 86
25	3	ARG	ARG	SER	SER	G	G	59 - 86	59 - 86
26	3	ARG	ARG	SER	SER	H	H	59 - 86	59 - 86
27	3	ARG	ARG	SER	SER	I	I	59 - 86	59 - 86
28	4	LEU	LEU	HIS	HIS	A	A	89 - 98	89 - 98
29	4	LEU	LEU	HIS	HIS	B	B	89 - 98	89 - 98
30	4	LEU	LEU	HIS	HIS	C	C	89 - 98	89 - 98
31	4	LEU	LEU	HIS	HIS	D	D	89 - 98	89 - 98
32	4	LEU	LEU	HIS	HIS	E	E	89 - 98	89 - 98
33	4	LEU	LEU	HIS	HIS	F	F	89 - 98	89 - 98
34	4	LEU	LEU	HIS	HIS	G	G	89 - 98	89 - 98
35	4	LEU	LEU	HIS	HIS	H	H	89 - 98	89 - 98
36	4	LEU	LEU	HIS	HIS	I	I	89 - 98	89 - 98
37	5	ILE	ILE	PHE	PHE	A	A	102 - 106	102 - 106
38	5	ILE	ILE	PHE	PHE	B	B	102 - 106	102 - 106
39	5	ILE	ILE	PHE	PHE	C	C	102 - 106	102 - 106
40	5	ILE	ILE	PHE	PHE	D	D	102 - 106	102 - 106
41	5	ILE	ILE	PHE	PHE	E	E	102 - 106	102 - 106
42	5	ILE	ILE	PHE	PHE	F	F	102 - 106	102 - 106
43	5	ILE	ILE	PHE	PHE	G	G	102 - 106	102 - 106
44	5	ILE	ILE	PHE	PHE	H	H	102 - 106	102 - 106
45	5	ILE	ILE	PHE	PHE	I	I	102 - 106	102 - 106
46	6	ASP	ASP	SER	SER	A	A	112 - 118	112 - 118
47	6	ASP	ASP	SER	SER	B	B	112 - 118	112 - 118
48	6	ASP	ASP	SER	SER	C	C	112 - 118	112 - 118
49	6	ASP	ASP	SER	SER	D	D	112 - 118	112 - 118
50	6	ASP	ASP	SER	SER	E	E	112 - 118	112 - 118
51	6	ASP	ASP	SER	SER	F	F	112 - 118	112 - 118
52	6	ASP	ASP	SER	SER	G	G	112 - 118	112 - 118
53	6	ASP	ASP	SER	SER	H	H	112 - 118	112 - 118
54	6	ASP	ASP	SER	SER	I	I	112 - 118	112 - 118
55	7	ASP	ASP	ARG	ARG	A	A	124 - 134	124 - 134
56	7	ASP	ASP	ARG	ARG	B	B	124 - 134	124 - 134
57	7	ASP	ASP	ARG	ARG	C	C	124 - 134	124 - 134
58	7	ASP	ASP	ARG	ARG	D	D	124 - 134	124 - 134
59	7	ASP	ASP	ARG	ARG	E	E	124 - 134	124 - 134
60	7	ASP	ASP	ARG	ARG	F	F	124 - 134	124 - 134
61	7	ASP	ASP	ARG	ARG	G	G	124 - 134	124 - 134
62	7	ASP	ASP	ARG	ARG	H	H	124 - 134	124 - 134
63	7	ASP	ASP	ARG	ARG	I	I	124 - 134	124 - 134
64	8	ALA	ALA	ARG	ARG	A	A	139 - 151	139 - 151
65	8	ALA	ALA	ARG	ARG	B	B	139 - 151	139 - 151
66	8	ALA	ALA	ARG	ARG	C	C	139 - 151	139 - 151
67	8	ALA	ALA	ARG	ARG	D	D	139 - 151	139 - 151
68	8	ALA	ALA	ARG	ARG	E	E	139 - 151	139 - 151
69	8	ALA	ALA	ARG	ARG	F	F	139 - 151	139 - 151
70	8	ALA	ALA	ARG	ARG	G	G	139 - 151	139 - 151
71	8	ALA	ALA	ARG	ARG	H	H	139 - 151	139 - 151
72	8	ALA	ALA	ARG	ARG	I	I	139 - 151	139 - 151
73	9	GLN	GLN	GLY	GLY	A	A	164 - 171	164 - 171
74	9	GLN	GLN	GLY	GLY	B	B	164 - 171	164 - 171
75	9	GLN	GLN	GLY	GLY	C	C	164 - 171	164 - 171
76	9	GLN	GLN	GLY	GLY	D	D	164 - 171	164 - 171
77	9	GLN	GLN	GLY	GLY	E	E	164 - 171	164 - 171
78	9	GLN	GLN	GLY	GLY	F	F	164 - 171	164 - 171
79	9	GLN	GLN	GLY	GLY	G	G	164 - 171	164 - 171
80	9	GLN	GLN	GLY	GLY	H	H	164 - 171	164 - 171
81	9	GLN	GLN	GLY	GLY	I	I	164 - 171	164 - 171
82	10	GLN	GLN	LEU	LEU	A	A	176 - 193	176 - 193
83	10	GLN	GLN	LEU	LEU	B	B	176 - 193	176 - 193
84	10	GLN	GLN	LEU	LEU	C	C	176 - 193	176 - 193
85	10	GLN	GLN	LEU	LEU	D	D	176 - 193	176 - 193
86	10	GLN	GLN	LEU	LEU	E	E	176 - 193	176 - 193
87	10	GLN	GLN	LEU	LEU	F	F	176 - 193	176 - 193
88	10	GLN	GLN	LEU	LEU	G	G	176 - 193	176 - 193
89	10	GLN	GLN	LEU	LEU	H	H	176 - 193	176 - 193
90	10	GLN	GLN	LEU	LEU	I	I	176 - 193	176 - 193

#1: Protein	Neurexin-1-beta / neurexin I-beta Mass: 24321.201 Da / Num. of mol.: 10 / Fragment: LNS/LG domain Source method: isolated from a genetically manipulated source Source: (gene. exp.) Rattus norvegicus (Norway rat) / Gene: Nrxn1 / Plasmid: pGEX-KG / Species (production host): Escherichia coli / Production host: Escherichia coli BL21(DE3) (bacteria) / Strain (production host): BL21(DE3) / References: UniProt: Q63373
#2: Chemical	ChemComp-CA / CALCIUM ION Mass: 40.078 Da / Num. of mol.: 3 / Source method: obtained synthetically / Formula: Ca
#3: Water	ChemComp-HOH / water Mass: 18.015 Da / Num. of mol.: 113 / Source method: isolated from a natural source / Formula: H₂O
Compound details	THE RESIDUE NUMBERING IN THIS ENTRY IS DIFFERENT THAN THE CONVENTION USED FOR THE NEUREXIN 1BETA ...THE RESIDUE NUMBERING IN THIS ENTRY IS DIFFERENT THAN THE CONVENTION USED FOR THE NEUREXIN 1BETA CA2+-FREE FORM, PDB ENTRY 1C4R. CHAIN W IS A FRAGMENT FROM ONE OF CHAINS A-I BUT IT CANNOT BE UNEQUIVOCALLY ASSIGNED TO ANY OF THEM.

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Experiment

Experiment	Method: X-RAY DIFFRACTION / Number of used crystals: 1

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Sample preparation

Crystal	Density Matthews: 2.44 Å³/Da / Density % sol: 49.55 %
Crystal grow	Temperature: 294 K / Method: vapor diffusion, hanging drop / pH: 7.5 Details: 21% Peg 5000 MME, 0.1 M sodium cacodylate pH 6.5, 0.2 M AmSO4, 1.86% 1,2,3-heptanetriol, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 294K

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Data collection

Diffraction	Mean temperature: 103 K
Diffraction source	Source: SYNCHROTRON / Site: APS / Beamline: 19-BM / Wavelength: 0.97949 Å
Detector	Type: MARRESEARCH / Detector: CCD / Date: Jan 15, 2001
Radiation	Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelength	Wavelength: 0.97949 Å / Relative weight: 1
Reflection	Resolution: 2.6→40.6 Å / Num. all: 73949 / Num. obs: 73949 / % possible obs: 99.9 % / Observed criterion σ(F): 0 / Observed criterion σ(I): 0 / Redundancy: 4.9 % / B_iso Wilson estimate: 51 Å² / R_merge(I) obs: 0.065 / Net I/σ(I): 24.8
Reflection shell	Resolution: 2.6→2.64 Å / Redundancy: 4.7 % / R_merge(I) obs: 0.423 / Mean I/σ(I) obs: 4.3 / Num. unique all: 3636 / R_sym value: 0.423 / % possible all: 99.8

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Processing

Software

Name	Version	Classification
REFMAC	5.2	refinement
HKL-2000		data reduction
HKL-2000		data scaling

Refinement

Method to determine structure:

FOURIER SYNTHESIS
Starting model: 1C4R

1c4r

Resolution: 2.6→20 Å / Cor.coef. F_o:F_c: 0.941 / Cor.coef. F_o:F_c free: 0.916 / SU B: 19.07 / SU ML: 0.194 / TLS residual ADP flag: LIKELY RESIDUAL / Isotropic thermal model: isotropic / Cross valid method: THROUGHOUT / σ(F): 0 / σ(I): 0 / ESU R: 0.41 / ESU R Free: 0.27 / Stereochemistry target values: MAXIMUM LIKELIHOOD

	R_factor	Num. reflection	% reflection	Selection details
R_free	0.24401	3741	5.1 %	RANDOM
R_work	0.20273	-	-	-
all	0.20482	73564	-	-
obs	0.20482	69823	100 %	-

Solvent computation

Ion probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.2 Å / Solvent model: BABINET MODEL WITH MASK

Displacement parameters

B_iso mean: 40.116 Å²

	B_aniso -1	B_aniso -2	B_aniso -3
1-	2.91 Å²	0 Å²	0 Å²
2-	-	-2.49 Å²	0 Å²
3-	-	-	-0.42 Å²

Refinement step

Cycle: LAST / Resolution: 2.6→20 Å

	Protein	Nucleic acid	Ligand	Solvent	Total
Num. atoms	12101	0	3	113	12217

Refine LS restraints

Refine-ID	Type	Dev ideal	Dev ideal target	Number
X-RAY DIFFRACTION	r_bond_refined_d	0.017	0.022	12342
X-RAY DIFFRACTION	r_angle_refined_deg	1.614	1.927	16753
X-RAY DIFFRACTION	r_dihedral_angle_1_deg	7.43	5	1585
X-RAY DIFFRACTION	r_dihedral_angle_2_deg	41.68	24.531	565
X-RAY DIFFRACTION	r_dihedral_angle_3_deg	17.132	15	1929
X-RAY DIFFRACTION	r_dihedral_angle_4_deg	18.155	15	68
X-RAY DIFFRACTION	r_chiral_restr	0.101	0.2	1866
X-RAY DIFFRACTION	r_gen_planes_refined	0.006	0.02	9526
X-RAY DIFFRACTION	r_nbd_refined	0.22	0.2	4820
X-RAY DIFFRACTION	r_nbtor_refined	0.313	0.2	8255
X-RAY DIFFRACTION	r_xyhbond_nbd_refined	0.134	0.2	492
X-RAY DIFFRACTION	r_metal_ion_refined	0.113	0.2	8
X-RAY DIFFRACTION	r_symmetry_vdw_refined	0.203	0.2	92
X-RAY DIFFRACTION	r_symmetry_hbond_refined	0.106	0.2	15
X-RAY DIFFRACTION	r_mcbond_it	0.666	1.5	8026
X-RAY DIFFRACTION	r_mcangle_it	1.143	2	12548
X-RAY DIFFRACTION	r_scbond_it	1.729	3	4876
X-RAY DIFFRACTION	r_scangle_it	2.778	4.5	4205

Refine LS restraints NCS

Ens-ID: 1 / Number: 807 / Refine-ID: X-RAY DIFFRACTION

Dom-ID	Auth asym-ID	Type	Rms dev position (Å)	Weight position
1	A	medium positional	0.29	0.5
2	B	medium positional	0.41	0.5
3	C	medium positional	0.3	0.5
4	D	medium positional	0.34	0.5
5	E	medium positional	0.31	0.5
6	F	medium positional	0.37	0.5
7	G	medium positional	0.33	0.5
8	H	medium positional	0.33	0.5
9	I	medium positional	0.47	0.5
1	A	medium thermal	0.73	2
2	B	medium thermal	0.9	2
3	C	medium thermal	0.83	2
4	D	medium thermal	0.88	2
5	E	medium thermal	0.76	2
6	F	medium thermal	0.84	2
7	G	medium thermal	0.84	2
8	H	medium thermal	0.81	2
9	I	medium thermal	0.65	2

LS refinement shell

Resolution: 2.6→2.666 Å / Total num. of bins used: 20

	R_factor	Num. reflection	% reflection
R_free	0.349	291	-
R_work	0.283	5014	-
obs	-	5305	100 %

Refinement TLS params.

Method: refined / Refine-ID: X-RAY DIFFRACTION

ID	L11 (°²)	L12 (°²)	L13 (°²)	L22 (°²)	L23 (°²)	L33 (°²)	S11 (Å °)	S12 (Å °)	S13 (Å °)	S21 (Å °)	S22 (Å °)	S23 (Å °)	S31 (Å °)	S32 (Å °)	S33 (Å °)	T11 (Å²)	T12 (Å²)	T13 (Å²)	T22 (Å²)	T23 (Å²)	T33 (Å²)	Origin x (Å)	Origin y (Å)	Origin z (Å)
1	2.3052	0.0626	0.7933	9.6745	-0.5457	1.7265	0.281	0.1358	-0.4185	-0.6307	-0.0465	0.1516	0.353	-0.0377	-0.2345	0.0022	0.0523	-0.0403	-0.1414	-0.0248	-0.0655	34.642	19.6656	50.8275
2	1.4089	-0.3671	0.5897	2.5802	-0.7998	4.6616	-0.0189	-0.0981	0.1752	0.0886	-0.062	-0.076	-0.2056	0.2106	0.0809	-0.2943	-0.0229	0.0222	-0.151	0.0088	-0.187	35.8138	55.1031	67.8686
3	2.2887	0.2148	-0.8686	7.4692	-0.0135	2.1654	0.0778	-0.0249	0.1955	-0.3854	-0.0222	0.2178	-0.1504	-0.0086	-0.0555	-0.0951	0.0298	0.0211	-0.1809	0.014	-0.0839	22.4357	94.3727	-1.4657
4	1.0676	-0.4318	-1.1117	3.6705	0.3908	5.8919	0.0262	0.0024	-0.1543	0.1673	-0.0158	0.0226	0.2675	-0.2305	-0.0104	-0.2308	-0.0075	-0.0019	-0.1405	0.0071	-0.1922	20.9674	58.9597	15.7013
5	2.047	-0.608	0.2974	7.0878	-0.0364	1.3278	-0.186	0.0151	0.5825	-0.1867	-0.0762	-0.3942	-0.3268	0.1299	0.2623	-0.0433	-0.0304	-0.0894	-0.1574	0.0314	-0.0759	25.6878	81.1813	44.5851
6	5.6166	-0.6282	-0.3614	2.7296	-0.8488	2.6481	-0.014	-0.1606	-0.2644	-0.0466	0.1504	0.2317	0.3751	-0.4699	-0.1364	-0.1545	-0.1001	-0.0945	-0.0482	0.0448	-0.2162	8.1654	47.2975	53.4978
7	2.4777	-0.1744	-0.2146	6.3064	-0.3271	1.7308	-0.0316	0.0225	-0.3189	0.2439	-0.1084	-0.0304	0.1415	0.0202	0.14	-0.1574	-0.0216	0.0495	-0.177	-0.0533	-0.2325	32.2062	32.6178	96.7281
8	6.0025	-0.3479	1.2605	3.9333	1.1222	3.2851	0.0254	-0.0916	0.2184	0.0062	0.2237	-0.4658	-0.2416	0.5417	-0.2491	-0.2013	-0.0883	0.055	0.006	-0.0825	-0.0984	47.996	67.0218	105.0453
9	2.9525	0.3046	-1.3131	15.868	4.7527	6.5899	-0.217	-0.1794	0.0074	1.1839	-0.7239	1.5226	0.2799	-0.731	0.9409	0.3997	-0.0524	0.1455	0.2958	-0.1089	0.3072	14.3698	19.8061	23.6937

Refinement TLS group

ID	Refine-ID	Refine TLS-ID	Auth asym-ID	Label asym-ID	Auth seq-ID	Label seq-ID
1	X-RAY DIFFRACTION	1	A	A	35 - 216	35 - 216
2	X-RAY DIFFRACTION	2	B	B	35 - 214	35 - 214
3	X-RAY DIFFRACTION	2	B	K	1000	1
4	X-RAY DIFFRACTION	3	C	C	34 - 216	34 - 216
5	X-RAY DIFFRACTION	4	D	D	35 - 213	35 - 213
6	X-RAY DIFFRACTION	4	D	L	2000	1
7	X-RAY DIFFRACTION	5	E	E	35 - 216	35 - 216
8	X-RAY DIFFRACTION	6	F	F	35 - 212	35 - 212
9	X-RAY DIFFRACTION	7	G	G	35 - 216	35 - 216
10	X-RAY DIFFRACTION	8	H	H	36 - 211	36 - 211
11	X-RAY DIFFRACTION	9	I	I	39 - 211	39 - 211
12	X-RAY DIFFRACTION	9	I	M	3000	1

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