Method to determine structure: SAD / Resolution: 1.56→30 Å / FOM work R set: 0.791 / Cross valid method: THROUGHOUT / σ(F): 0 / Stereochemistry target values: Engh & Huber
Rfactor
Num. reflection
% reflection
Selection details
Rfree
0.226
4587
5 %
Random
Rwork
0.196
-
-
-
all
-
91403
-
-
obs
-
91335
99.5 %
-
Solvent computation
Bsol: 29.816 Å2
Displacement parameters
Biso mean: 26.141 Å2
Baniso -1
Baniso -2
Baniso -3
1-
-0.159 Å2
0 Å2
0 Å2
2-
-
-0.159 Å2
0 Å2
3-
-
-
0.318 Å2
Refine analyze
Free
Obs
Luzzati coordinate error
0.21 Å
0.18 Å
Luzzati d res low
-
5 Å
Luzzati sigma a
0.14 Å
0.12 Å
Refinement step
Cycle: LAST / Resolution: 1.56→30 Å
Protein
Nucleic acid
Ligand
Solvent
Total
Num. atoms
4490
0
0
794
5284
Refine LS restraints
Refine-ID
Type
Dev ideal
Dev ideal target
X-RAY DIFFRACTION
c_mcbond_it
2.008
1.5
X-RAY DIFFRACTION
c_scbond_it
3.605
2
X-RAY DIFFRACTION
c_mcangle_it
2.857
2
X-RAY DIFFRACTION
c_scangle_it
5.305
2.5
LS refinement shell
Refine-ID: X-RAY DIFFRACTION / Total num. of bins used: 50
Resolution (Å)
Rfactor Rfree
Num. reflection Rfree
Rfactor Rwork
Num. reflection Rwork
Num. reflection obs
1.56-1.57
0.273
83
0.256
1577
1660
1.57-1.58
0.269
85
0.253
1701
1786
1.58-1.59
0.313
86
0.237
1657
1743
1.59-1.6
0.269
81
0.241
1762
1843
1.6-1.62
0.273
94
0.233
1699
1793
1.62-1.63
0.24
98
0.228
1723
1821
1.63-1.64
0.259
84
0.215
1727
1811
1.64-1.65
0.261
100
0.209
1697
1797
1.65-1.67
0.248
91
0.229
1730
1821
1.67-1.68
0.237
81
0.213
1723
1804
1.68-1.69
0.242
106
0.224
1708
1814
1.69-1.71
0.279
77
0.215
1748
1825
1.71-1.72
0.229
84
0.216
1717
1801
1.72-1.74
0.26
88
0.207
1794
1882
1.74-1.76
0.223
77
0.201
1709
1786
1.76-1.77
0.227
102
0.213
1717
1819
1.77-1.79
0.248
95
0.204
1707
1802
1.79-1.81
0.23
89
0.21
1729
1818
1.81-1.83
0.257
91
0.202
1729
1820
1.83-1.85
0.285
85
0.207
1746
1831
1.85-1.87
0.262
89
0.207
1747
1836
1.87-1.89
0.273
82
0.204
1719
1801
1.89-1.92
0.25
93
0.21
1737
1830
1.92-1.94
0.21
92
0.198
1738
1830
1.94-1.97
0.255
99
0.196
1739
1838
1.97-1.99
0.249
92
0.192
1727
1819
1.99-2.02
0.232
79
0.196
1741
1820
2.02-2.05
0.239
99
0.199
1751
1850
2.05-2.08
0.291
90
0.201
1706
1796
2.08-2.12
0.196
95
0.199
1758
1853
2.12-2.15
0.242
95
0.198
1726
1821
2.15-2.19
0.211
87
0.197
1737
1824
2.19-2.23
0.219
94
0.197
1754
1848
2.23-2.28
0.233
95
0.195
1726
1821
2.28-2.33
0.211
101
0.2
1740
1841
2.33-2.38
0.239
110
0.203
1739
1849
2.38-2.44
0.232
100
0.209
1735
1835
2.44-2.51
0.235
101
0.207
1724
1825
2.51-2.58
0.244
90
0.207
1751
1841
2.58-2.67
0.242
98
0.217
1756
1854
2.67-2.76
0.253
69
0.222
1765
1834
2.76-2.87
0.237
94
0.216
1760
1854
2.87-3
0.194
85
0.202
1764
1849
3-3.16
0.22
87
0.181
1756
1843
3.16-3.36
0.224
98
0.177
1765
1863
3.36-3.62
0.21
99
0.165
1776
1875
3.62-3.98
0.166
92
0.152
1768
1860
3.98-4.56
0.164
95
0.153
1781
1876
4.56-5.73
0.183
108
0.166
1781
1889
5.73-30
0.246
102
0.26
1781
1883
Xplor file
Refine-ID
Serial no
Param file
X-RAY DIFFRACTION
1
CNS_TOPPAR:protein_rep.param
X-RAY DIFFRACTION
2
CNS_TOPPAR:water_rep.param
+
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