protein tetramerization / transcription cis-regulatory region binding / DNA-binding transcription factor activity / apoptotic process / nucleus / metal ion binding 類似検索 - 分子機能
2.5 mM [U-100% 15N] protein, 50 mM L-arginine, 50 mM L-glutamate, 1 mM DTT, 95% H2O/5% D2O
95% H2O/5% D2O
2
2.5 mM [U-100% 13C; U-100% 15N] protein, 50 mM L-arginine, 50 mM L-glutamate, 1 mM DTT, 95% H2O/5% D2O
95% H2O/5% D2O
3
2 mM [U-100% 15N] protein, 2 mM [U-100% 13C] protein, 50 mM L-arginine, 50 mM L-glutamate, 1 mM DTT, 95% H2O/5% D2O
95% H2O/5% D2O
試料
濃度 (mg/ml)
構成要素
Isotopic labeling
Solution-ID
2.5mM
entity-1
[U-100% 15N]
1
50mM
L-arginine-2
1
50mM
L-glutamate-3
1
1mM
DTT-4
1
2.5mM
entity-5
[U-100% 13C; U-100% 15N]
2
50mM
L-arginine-6
2
50mM
L-glutamate-7
2
1mM
DTT-8
2
2mM
entity-9
[U-100% 15N]
3
2mM
entity-10
[U-100% 13C]
3
50mM
L-arginine-11
3
50mM
L-glutamate-12
3
1mM
DTT-13
3
試料状態
イオン強度: 0 / pH: 7 / 圧: ambient / 温度: 298 K
-
NMR測定
NMRスペクトロメーター
タイプ
製造業者
モデル
磁場強度 (MHz)
Spectrometer-ID
Bruker Avance
Bruker
AVANCE
900
1
Bruker Avance
Bruker
AVANCE
800
2
Bruker Avance
Bruker
AVANCE
700
3
Bruker Avance
Bruker
AVANCE
600
4
Bruker Avance
Bruker
AVANCE
500
5
-
解析
NMR software
名称
バージョン
開発者
分類
CYANA
3.9
Guntert, MumenthalerandWuthrich
構造決定
CNS
1.1
Brunger, Adams, Clore, Gros, NilgesandRead
構造決定
ARIA
1.2
Linge, O'DonoghueandNilges
構造決定
ARIA
1.2
Linge, O'DonoghueandNilges
精密化
TopSpin
2.1
BrukerBiospin
collection
TopSpin
2.1
BrukerBiospin
解析
Sparky
3.114
Goddard
chemicalshiftassignment
Sparky
3.114
Goddard
データ解析
Sparky
3.114
Goddard
peakpicking
精密化
手法: simulated annealing, energy minimization / ソフトェア番号: 1 詳細: SIMULATED ANNEALING WITH TORSION ANGLE DYNAMICS, REFINEMENT IN EXPLICIT WATER
NMR constraints
NOE constraints total: 1433 / NOE intraresidue total count: 300 / NOE long range total count: 38 / NOE medium range total count: 293 / NOE sequential total count: 322 / Hydrogen bond constraints total count: 40
代表構造
選択基準: lowest energy
NMRアンサンブル
コンフォーマー選択の基準: target function / 計算したコンフォーマーの数: 100 / 登録したコンフォーマーの数: 20