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- PDB-2mdg: Solution NMR Structure of Zinc finger protein 423 from Homo sapie... -
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Basic information
Entry | Database: PDB / ID: 2mdg | ||||||
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Title | Solution NMR Structure of Zinc finger protein 423 from Homo sapiens, Northeast Structural Genomics Consortium (NESG) Target HR7298F | ||||||
![]() | Zinc finger protein 423 | ||||||
![]() | DNA BINDING PROTEIN / Structural Genomics / NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) / Target HR7298F / PSI-Biology / Protein Structure Initiative / C2H2 | ||||||
Function / homology | ![]() smoothened signaling pathway involved in regulation of cerebellar granule cell precursor cell proliferation / cerebellar granule cell precursor proliferation / positive regulation of BMP signaling pathway / protein localization to cilium / negative regulation of cold-induced thermogenesis / cilium assembly / Notch signaling pathway / sequence-specific DNA binding / cell differentiation / DNA-binding transcription factor activity ...smoothened signaling pathway involved in regulation of cerebellar granule cell precursor cell proliferation / cerebellar granule cell precursor proliferation / positive regulation of BMP signaling pathway / protein localization to cilium / negative regulation of cold-induced thermogenesis / cilium assembly / Notch signaling pathway / sequence-specific DNA binding / cell differentiation / DNA-binding transcription factor activity / negative regulation of DNA-templated transcription / regulation of DNA-templated transcription / positive regulation of DNA-templated transcription / DNA binding / nucleoplasm / nucleus / metal ion binding Similarity search - Function | ||||||
Biological species | ![]() | ||||||
Method | SOLUTION NMR | ||||||
Model details | fewest violations, model6 | ||||||
![]() | Pederson, K. / Lee, D. / Kohan, E. / Janjua, H. / Xiao, R. / Everett, J.K. / Acton, T.B. / Montelione, G.T. / Prestegard, J.H. / Northeast Structural Genomics Consortium (NESG) | ||||||
![]() | ![]() Title: Solution NMR Structure of Zinc finger protein 423 from Homo sapiens, Northeast Structural Genomics Consortium (NESG) Target HR7298F Authors: Pederson, K. / Lee, D. / Kohan, E. / Janjua, H. / Xiao, R. / Everett, J.K. / Acton, T.B. / Montelione, G.T. / Prestegard, J.H. | ||||||
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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PDBx/mmCIF format | ![]() | 349.4 KB | Display | ![]() |
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PDB format | ![]() | 289 KB | Display | ![]() |
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-Validation report
Summary document | ![]() | 398.6 KB | Display | ![]() |
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Full document | ![]() | 492 KB | Display | |
Data in XML | ![]() | 18.1 KB | Display | |
Data in CIF | ![]() | 31.3 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Similar structure data | |
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Assembly
Deposited unit | ![]()
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NMR ensembles |
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Components
#1: Protein | Mass: 6337.325 Da / Num. of mol.: 1 / Fragment: UNP residues 928-981 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() ![]() |
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#2: Chemical |
-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR Details: The NESG target Hr7298F contains two C2H2 zinc finger motifs between residues 928 and 981 of the Homo sapiens Zinc finger protein 423. Residual dipolar couplings suggest that the two zinc ...Details: The NESG target Hr7298F contains two C2H2 zinc finger motifs between residues 928 and 981 of the Homo sapiens Zinc finger protein 423. Residual dipolar couplings suggest that the two zinc finger motifs are connected by flexible loops and not restricted with respect to one another. Therefore the positions of domains with respect to one another in the structures reported are not significant. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Sample preparation
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