+Open data
-Basic information
Entry | Database: PDB / ID: 2lr7 | ||||||
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Title | Cathelicidin-PY | ||||||
Components | Cathelicidin-PY | ||||||
Keywords | UNKNOWN FUNCTION | ||||||
Function / homology | Cathelicidin-PY Function and homology information | ||||||
Biological species | Rana catesbeiana (American bullfrog) | ||||||
Method | SOLUTION NMR / distance geometry | ||||||
Model details | closest to the average, model 1 | ||||||
Authors | Yang, J. | ||||||
Citation | Journal: To be Published Title: Structure of Cathelicidin-PY Authors: Yang, J. / Wei, L. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 2lr7.cif.gz | 221.8 KB | Display | PDBx/mmCIF format |
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PDB format | pdb2lr7.ent.gz | 193.9 KB | Display | PDB format |
PDBx/mmJSON format | 2lr7.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 2lr7_validation.pdf.gz | 381.1 KB | Display | wwPDB validaton report |
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Full document | 2lr7_full_validation.pdf.gz | 489.2 KB | Display | |
Data in XML | 2lr7_validation.xml.gz | 13.6 KB | Display | |
Data in CIF | 2lr7_validation.cif.gz | 20.8 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/lr/2lr7 ftp://data.pdbj.org/pub/pdb/validation_reports/lr/2lr7 | HTTPS FTP |
-Related structure data
Similar structure data | |
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Other databases |
-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein/peptide | Mass: 3434.196 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Rana catesbeiana (American bullfrog) / Production host: Escherichia coli (E. coli) / References: UniProt: M9MMP3*PLUS |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||
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NMR experiment |
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-Sample preparation
Details | Contents: 10% mM [U-2H] D2O-1, 90% H2O/10% D2O / Solvent system: 90% H2O/10% D2O |
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Sample | Conc.: 0.1 mM / Component: D2O-1 / Isotopic labeling: [U-2H] |
Sample conditions | Ionic strength: 0.0001 / pH: 6.2 / Pressure: ambient / Temperature: 25 K |
-NMR measurement
NMR spectrometer | Type: Bruker Avance / Manufacturer: Bruker / Model: Avance / Field strength: 600 MHz |
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-Processing
NMR software |
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Refinement | Method: distance geometry / Software ordinal: 1 | |||||||||
NMR representative | Selection criteria: closest to the average | |||||||||
NMR ensemble | Conformer selection criteria: structures with the lowest energy Conformers calculated total number: 200 / Conformers submitted total number: 20 / Representative conformer: 20 |