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Open data
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Basic information
Entry | Database: PDB / ID: 2l6i | ||||||||||||||||||
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Title | Solution structure of coronaviral stem-loop 2 (SL2) | ||||||||||||||||||
![]() | RNA (5'-R(*![]() RNA / RNA tetraloop / severe acute respiratory syndrome / mouse hepatitis virus / coronavirus | Function / homology | RNA / RNA (> 10) | ![]() Method | SOLUTION NMR / DGSA-distance geometry simulated annealing, molecular dynamics | ![]() Lee, C. / Li, L. / Giedroc, D.P. | ![]() ![]() Title: The solution structure of coronaviral stem-loop 2 (SL2) reveals a canonical CUYG tetraloop fold. Authors: Lee, C.W. / Li, L. / Giedroc, D.P. History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 258.3 KB | Display | ![]() |
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PDB format | ![]() | 217.1 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 323 KB | Display | ![]() |
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Full document | ![]() | 433.2 KB | Display | |
Data in XML | ![]() | 8.4 KB | Display | |
Data in CIF | ![]() | 14.7 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Similar structure data |
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Assembly
Deposited unit | ![]()
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NMR ensembles |
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Components
#1: RNA chain | Mass: 5060.023 Da / Num. of mol.: 1 / Source method: obtained synthetically |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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NMR experiment |
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Sample preparation
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Sample conditions |
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-NMR measurement
NMR spectrometer |
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Processing
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Refinement | Method: DGSA-distance geometry simulated annealing, molecular dynamics Software ordinal: 1 | ||||||||||||||||||||||||||||||||
NMR representative | Selection criteria: lowest energy | ||||||||||||||||||||||||||||||||
NMR ensemble | Conformer selection criteria: structures with the lowest energy Conformers calculated total number: 100 / Conformers submitted total number: 27 |