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- PDB-2l2c: NMR Structure of mosquito odorant binding protein bound to MOP ph... -
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Open data
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Basic information
Entry | Database: PDB / ID: 2l2c | ||||||
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Title | NMR Structure of mosquito odorant binding protein bound to MOP pheromone | ||||||
![]() | Odorant-binding protein | ||||||
![]() | TRANSPORT PROTEIN / pheromone binding protein | ||||||
Function / homology | ![]() odorant binding / sensory perception of smell / extracellular space / metal ion binding Similarity search - Function | ||||||
Biological species | ![]() | ||||||
Method | SOLUTION NMR / simulated annealing | ||||||
![]() | Ames, J. | ||||||
![]() | ![]() Title: 1H, 13C, 15N resonance assignments for odorant protein 1 Authors: Ames, J. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 594.3 KB | Display | ![]() |
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PDB format | ![]() | 510.8 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 354.6 KB | Display | ![]() |
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Full document | ![]() | 500.8 KB | Display | |
Data in XML | ![]() | 54.8 KB | Display | |
Data in CIF | ![]() | 69.7 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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NMR ensembles |
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Components
#1: Protein | Mass: 14530.682 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() Gene: CpipJ_CPIJ007604 / Production host: ![]() ![]() |
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Sequence details | RESIDUE 77 WAS INADVERTAN |
-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||||||||||
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NMR experiment |
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Sample preparation
Details | Contents: 0.5 mM [U-98% 13C; U-98% 15N] CquiOBP1-1, 90% H2O/10% D2O Solvent system: 90% H2O/10% D2O |
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Sample | Conc.: 0.5 mM / Component: CquiOBP1-1 / Isotopic labeling: [U-98% 13C; U-98% 15N] |
Sample conditions | Ionic strength: 20 / pH: 7.0 / Pressure: ambient / Temperature: 298 K |
-NMR measurement
NMR spectrometer | Type: Bruker DRX / Manufacturer: Bruker / Model: DRX / Field strength: 600 MHz |
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Processing
NMR software | Name: ![]() Developer: Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax Classification: processing |
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Refinement | Method: simulated annealing / Software ordinal: 1 |
NMR representative | Selection criteria: closest to the average |
NMR ensemble | Conformer selection criteria: structures with the lowest energy Conformers calculated total number: 30 / Conformers submitted total number: 15 |