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- PDB-2krw: Solution structure of the E coli tRNA-Arg1 (ACG) containing the 2... -
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Basic information
Entry | Database: PDB / ID: 2krw | |||||||||||||||||||||
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Title | Solution structure of the E coli tRNA-Arg1 (ACG) containing the 2-thiocytidine modification in position 32 | |||||||||||||||||||||
![]() | RNA (5'-R(*![]() RNA / tRNA / 2-thiocytidine / ASL / modification | Function / homology | RNA / RNA (> 10) | ![]() Method | SOLUTION NMR / simulated annealing | ![]() Bilbille, Y. / Agris, P.F. | ![]() ![]() Title: Solution structure of the tRNA-Arg1 (ACG) containing the 2-thiocytidine modification in position 32 Authors: Bilbille, Y. / Cantara, W.A. / Kim, J. / Agris, P.F. History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Download
PDBx/mmCIF format | ![]() | 121.2 KB | Display | ![]() |
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PDB format | ![]() | 99.2 KB | Display | ![]() |
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-Validation report
Summary document | ![]() | 321.1 KB | Display | ![]() |
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Full document | ![]() | 378.5 KB | Display | |
Data in XML | ![]() | 4.2 KB | Display | |
Data in CIF | ![]() | 6.2 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
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Similar structure data | |
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Links
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Assembly
Deposited unit | ![]()
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NMR ensembles |
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Components
#1: RNA chain | Mass: 5457.382 Da / Num. of mol.: 1 / Source method: obtained synthetically |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||||||||||
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NMR experiment |
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Sample preparation
Details |
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Sample |
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Sample conditions | Ionic strength: 20 / pH: 6.8 / Pressure: ambient / Temperature: 298 K |
-NMR measurement
NMR spectrometer |
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Processing
NMR software |
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Refinement | Method: simulated annealing / Software ordinal: 1 | ||||||||||||||||||||||||||||||||||||||||||||||||
NMR representative | Selection criteria: closest to the average | ||||||||||||||||||||||||||||||||||||||||||||||||
NMR ensemble | Conformer selection criteria: structures with the lowest energy Conformers calculated total number: 100 / Conformers submitted total number: 11 |