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- PDB-1slo: FIRST STEM LOOP OF THE SL1 RNA FROM CAENORHABDITIS ELEGANS, NMR, ... -
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Open data
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Basic information
Entry | Database: PDB / ID: 1slo | ||||||||||||||||||||
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Title | FIRST STEM LOOP OF THE SL1 RNA FROM CAENORHABDITIS ELEGANS, NMR, MINIMIZED AVERAGE STRUCTURE | ||||||||||||||||||||
![]() | RNA (5'-R(*![]() RNA / SPLICE DONOR SITE / STEM-LOOP / RIBONUCLEIC ACID | Function / homology | RNA / RNA (> 10) | ![]() Biological species | ![]() ![]() Method | SOLUTION NMR | ![]() Greenbaum, N.L. / Radhakrishnan, I. / Patel, D.J. / Hirsh, D. | ![]() ![]() Title: Solution structure of the donor site of a trans-splicing RNA. Authors: Greenbaum, N.L. / Radhakrishnan, I. / Patel, D.J. / Hirsh, D. #1: ![]() Title: Determination of the Folding Topology of the Sl1 RNA from Caenorhabditis Elegans by Multidimensional Heteronuclear NMR Authors: Greenbaum, N.L. / Radhakrishnan, I. / Hirsh, D. / Patel, D.J. History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 19.9 KB | Display | ![]() |
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PDB format | ![]() | 12.7 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
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-Validation report
Summary document | ![]() | 292.9 KB | Display | ![]() |
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Full document | ![]() | 292.7 KB | Display | |
Data in XML | ![]() | 2 KB | Display | |
Data in CIF | ![]() | 2.3 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
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Links
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Assembly
Deposited unit | ![]()
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NMR ensembles |
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Components
#1: RNA chain | Mass: 6063.642 Da / Num. of mol.: 1 Fragment: 19 RESIDUE MODIFIED FRAGMENT FROM THE FIRST STEM LOOP OF THE SL1 RNA FROM CAENORHABDITIS ELEGANS Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
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Sample preparation
Crystal grow | *PLUS Method: other / Details: NMR |
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Processing
Software |
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NMR software | Name: X-PLOR 3.1F / Version: 3.1F / Developer: BRUNGER / Classification: refinement | ||||||||||||
Refinement | Software ordinal: 1 / Details: CHARMM | ||||||||||||
NMR ensemble | Conformer selection criteria: MINIMIZED AVERAGE / Conformers calculated total number: 16 / Conformers submitted total number: 1 |