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- PDB-2jxa: Mouse Latrophilin-1 GPCR Gal_lectin domain in complex with Rhamnose -
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Open data
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Basic information
Entry | Database: PDB / ID: 2jxa | ||||||
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Title | Mouse Latrophilin-1 GPCR Gal_lectin domain in complex with Rhamnose | ||||||
![]() | Latrophilin 1 | ||||||
![]() | CELL ADHESION / SIGNALING PROTEIN / Lectin / beta-sandwich / disulphide / glycosylated / L-Rhamnose / complex / G-protein coupled receptor / Membrane / Receptor / Transducer / Transmembrane | ||||||
Function / homology | ![]() latrotoxin receptor activity / positive regulation of synapse maturation / positive regulation of synapse assembly / heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules / : / toxic substance binding / cell adhesion molecule binding / G protein-coupled receptor activity / adenylate cyclase-activating G protein-coupled receptor signaling pathway / presynaptic membrane ...latrotoxin receptor activity / positive regulation of synapse maturation / positive regulation of synapse assembly / heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules / : / toxic substance binding / cell adhesion molecule binding / G protein-coupled receptor activity / adenylate cyclase-activating G protein-coupled receptor signaling pathway / presynaptic membrane / growth cone / carbohydrate binding / cell surface receptor signaling pathway / neuron projection / axon / glutamatergic synapse / synapse / plasma membrane Similarity search - Function | ||||||
Biological species | ![]() ![]() | ||||||
Method | SOLUTION NMR / simulated annealing | ||||||
![]() | Vakonakis, I. / Campbell, I.D. | ||||||
![]() | ![]() Title: Solution structure and sugar-binding mechanism of mouse Latrophilin-1 RBL: a novel 7TM receptor-attached lectin-like domain. Authors: Vakonakis, I. / Langenhan, T. / Promel, S. / Russ, A. / Campbell, I.D. | ||||||
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 816.4 KB | Display | ![]() |
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PDB format | ![]() | 684.2 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 397.8 KB | Display | ![]() |
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Full document | ![]() | 554.5 KB | Display | |
Data in XML | ![]() | 54.6 KB | Display | |
Data in CIF | ![]() | 86.6 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Related structure data | ![]() 2jx9C C: citing same article ( |
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Similar structure data | |
Other databases |
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Links
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Assembly
Deposited unit | ![]()
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NMR ensembles |
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Components
#1: Protein | Mass: 11997.645 Da / Num. of mol.: 1 / Fragment: Gal_lectin Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() Description: gene construct integrated in the organism's genome Gene: Lphn1 / Production host: ![]() |
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#2: Sugar | ChemComp-NAG / |
#3: Sugar | ChemComp-RAM / |
-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||||||||||||||||||||||||||||||
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NMR experiment |
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Sample preparation
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