- PDB-2b0o: Crystal structure of UPLC1 GAP domain -
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基本情報
登録情報
データベース: PDB / ID: 2b0o
タイトル
Crystal structure of UPLC1 GAP domain
要素
UPLC1
キーワード
METAL BINDING PROTEIN / ARFGAP / Structural Genomics / Structural Genomics Consortium / SGC
機能・相同性
機能・相同性情報
regulation of stress fiber assembly / ruffle / GTPase activator activity / positive regulation of GTPase activity / cell migration / intracellular membrane-bounded organelle / focal adhesion / nucleoplasm / metal ion binding / cytosol 類似検索 - 分子機能
Arf GTPase activating protein, ASAP3 / : / ASAP, PH domain / Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein / Arf GTPase activating protein / BAR domain of APPL family / Arf GTPase activating protein / ArfGAP domain superfamily / Putative GTPase activating protein for Arf / ARF GTPase-activating proteins domain profile. ...Arf GTPase activating protein, ASAP3 / : / ASAP, PH domain / Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein / Arf GTPase activating protein / BAR domain of APPL family / Arf GTPase activating protein / ArfGAP domain superfamily / Putative GTPase activating protein for Arf / ARF GTPase-activating proteins domain profile. / Putative GTP-ase activating proteins for the small GTPase, ARF / BAR domain / ARFGAP/RecO-like zinc finger / Domain of unknown function DUF3447 / Annexin V; domain 1 / AH/BAR domain superfamily / Ankyrin repeat-containing domain / PH domain / PH domain profile. / Pleckstrin homology domain. / Pleckstrin homology domain / Ankyrin repeats (3 copies) / Ankyrin repeat profile. / Ankyrin repeat region circular profile. / ankyrin repeats / Ankyrin repeat / Ankyrin repeat-containing domain superfamily / Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat / Alpha Horseshoe / PH-like domain superfamily / Orthogonal Bundle / Mainly Alpha 類似検索 - ドメイン・相同性
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3 / Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3 類似検索 - 構成要素
解像度: 2.06→50 Å / Cor.coef. Fo:Fc: 0.946 / Cor.coef. Fo:Fc free: 0.917 / SU B: 4.307 / SU ML: 0.121 / 交差検証法: THROUGHOUT / σ(F): 1 / ESU R: 0.203 / ESU R Free: 0.178 / 立体化学のターゲット値: MAXIMUM LIKELIHOOD / 詳細: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
Rfactor
反射数
%反射
Selection details
Rfree
0.23264
3414
5 %
RANDOM
Rwork
0.1826
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obs
0.18518
64496
97.57 %
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all
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66102
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溶媒の処理
イオンプローブ半径: 0.8 Å / 減衰半径: 0.8 Å / VDWプローブ半径: 1.2 Å / 溶媒モデル: MASK