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- PDB-2abd: THE THREE-DIMENSIONAL STRUCTURE OF ACYL-COENZYME A BINDING PROTEI... -

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Basic information

Entry
Database: PDB / ID: 2abd
TitleTHE THREE-DIMENSIONAL STRUCTURE OF ACYL-COENZYME A BINDING PROTEIN FROM BOVINE LIVER. STRUCTURAL REFINEMENT USING HETERONUCLEAR MULTIDIMENSIONAL NMR SPECTROSCOPY
ComponentsACYL-COENZYME A BINDING PROTEIN
KeywordsACYL-COENZYME A BINDING PROTEIN
Function / homology
Function and homology information


Mitochondrial Fatty Acid Beta-Oxidation / fatty-acyl-CoA binding / fatty acid metabolic process / endoplasmic reticulum / Golgi apparatus
Similarity search - Function
Acyl-CoA-binding protein, ACBP, conserved site / Acyl-CoA-binding (ACB) domain signature. / Acyl-CoA-binding protein, ACBP / Acyl-CoA binding protein superfamily / Acyl CoA binding protein / Acyl-CoA-binding (ACB) domain profile. / Acyl-CoA Binding Protein - #10 / Acyl-CoA Binding Protein / FERM/acyl-CoA-binding protein superfamily / Up-down Bundle / Mainly Alpha
Similarity search - Domain/homology
Acyl-CoA-binding protein
Similarity search - Component
Biological speciesBos taurus (domestic cattle)
MethodSOLUTION NMR
AuthorsAndersen, K.V. / Poulsen, F.M.
Citation
Journal: J.Biomol.NMR / Year: 1993
Title: The three-dimensional structure of acyl-coenzyme A binding protein from bovine liver: structural refinement using heteronuclear multidimensional NMR spectroscopy.
Authors: Andersen, K.V. / Poulsen, F.M.
#1: Journal: J.Mol.Biol. / Year: 1992
Title: Three-Dimensional Structure in Solution of Acyl-Coenzyme a Binding Protein from Bovine Liver
Authors: Andersen, K.V. / Poulsen, F.M.
#2: Journal: Biochemistry / Year: 1991
Title: The Secondary Structure in Solution of Acyl-Coenzyme a Binding Protein from Bovine Liver Using 1H Nuclear Magnetic Resonance Spectroscopy
Authors: Andersen, K.V. / Ludvigsen, S. / Mandrup, S. / Knudsen, J. / Poulsen, F.M.
#3: Journal: Biochem.J. / Year: 1987
Title: Amino Acid Sequence of Acyl-Coa-Binding Protein from Cow Liver
Authors: Mikkelsen, J. / Hojrup, P. / Nielsen, P.R. / Roepstorff, P. / Knudsen, J.
History
DepositionMar 5, 1993Processing site: BNL
Revision 1.0Jul 15, 1993Provider: repository / Type: Initial release
Revision 1.1Mar 24, 2008Group: Version format compliance
Revision 1.2Jul 13, 2011Group: Version format compliance
Revision 1.3Nov 29, 2017Group: Derived calculations / Other
Category: pdbx_database_status / pdbx_struct_assembly ...pdbx_database_status / pdbx_struct_assembly / pdbx_struct_oper_list / struct_conf / struct_conf_type
Item: _pdbx_database_status.process_site
Revision 1.4May 1, 2024Group: Data collection / Database references / Category: chem_comp_atom / chem_comp_bond / database_2
Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Assembly

Deposited unit
A: ACYL-COENZYME A BINDING PROTEIN


Theoretical massNumber of molelcules
Total (without water)9,9311
Polymers9,9311
Non-polymers00
Water00
1


  • Idetical with deposited unit
  • defined by author
TypeNameSymmetry operationNumber
identity operation1_5551
NMR ensembles
DataCriteria
Number of conformers (submitted / calculated)29 / -
Representative

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Components

#1: Protein ACYL-COENZYME A BINDING PROTEIN


Mass: 9931.289 Da / Num. of mol.: 1
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Bos taurus (domestic cattle) / Organ: LIVER / Production host: Escherichia coli (E. coli) / References: UniProt: P07107

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Experimental details

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Experiment

ExperimentMethod: SOLUTION NMR

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Sample preparation

Sample conditionspH: 7 / Temperature: 298 K
Crystal grow
*PLUS
Method: other / Details: NMR

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Processing

Software
NameClassification
X-PLORmodel building
X-PLORrefinement
X-PLORphasing
NMR software
NameVersionDeveloperClassification
DIANA2GUNTERT,BRAUN,WUTHRICHrefinement
X-PLOR3BRUNGERrefinement
NMR ensembleConformers submitted total number: 29

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