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Open data
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Basic information
Entry | Database: PDB / ID: 1zfd | ||||||
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Title | SWI5 ZINC FINGER DOMAIN 2, NMR, 45 STRUCTURES | ||||||
![]() | SWI5 | ||||||
![]() | ZINC FINGER DNA BINDING DOMAIN / DNA BINDING MOTIF | ||||||
Function / homology | ![]() positive regulation of mating type switching / mediator complex binding / RNA polymerase II transcription regulatory region sequence-specific DNA binding / sequence-specific DNA binding / DNA-binding transcription factor activity, RNA polymerase II-specific / RNA polymerase II cis-regulatory region sequence-specific DNA binding / regulation of transcription by RNA polymerase II / negative regulation of transcription by RNA polymerase II / positive regulation of transcription by RNA polymerase II / nucleus ...positive regulation of mating type switching / mediator complex binding / RNA polymerase II transcription regulatory region sequence-specific DNA binding / sequence-specific DNA binding / DNA-binding transcription factor activity, RNA polymerase II-specific / RNA polymerase II cis-regulatory region sequence-specific DNA binding / regulation of transcription by RNA polymerase II / negative regulation of transcription by RNA polymerase II / positive regulation of transcription by RNA polymerase II / nucleus / metal ion binding / cytoplasm Similarity search - Function | ||||||
Biological species | ![]() ![]() | ||||||
Method | SOLUTION NMR | ||||||
![]() | Neuhaus, D. / Nakaseko, Y. / Schwabe, J.W.R. / Rhodes, D. / Klug, A. | ||||||
![]() | ![]() Title: Solution structures of two zinc-finger domains from SWI5 obtained using two-dimensional 1H nuclear magnetic resonance spectroscopy. A zinc-finger structure with a third strand of beta-sheet. Authors: Neuhaus, D. / Nakaseko, Y. / Schwabe, J.W. / Klug, A. #1: ![]() Title: Adjacent Zinc-Finger Motifs in Multiple Zinc-Finger Peptides from Swi5 Form Structurally Independent, Flexibly Linked Domains Authors: Nakaseko, Y. / Neuhaus, D. / Klug, A. / Rhodes, D. | ||||||
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 460 KB | Display | ![]() |
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PDB format | ![]() | 380.5 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 347 KB | Display | ![]() |
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Full document | ![]() | 633.1 KB | Display | |
Data in XML | ![]() | 31.2 KB | Display | |
Data in CIF | ![]() | 51.6 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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NMR ensembles |
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Components
#1: Protein/peptide | Mass: 3800.272 Da / Num. of mol.: 1 / Fragment: ZINC FINGER DOMAIN 2 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() Description: T7 PROMOTER / Plasmid: PRK172 / Production host: ![]() ![]() |
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#2: Chemical | ChemComp-ZN / |
-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
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Sample preparation
Crystal grow | *PLUS Method: other / Details: NMR |
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Processing
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NMR software | Name: ![]() | ||||||||||||
NMR ensemble | Conformers submitted total number: 45 |