登録情報 | データベース: PDB / ID: 1wth |
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タイトル | Crystal structure of gp5-S351L mutant and gp27 complex |
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要素 | - Baseplate structural protein Gp27
- Tail-associated lysozyme
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キーワード | Hydrolase/Structural protein / Triple-stranded beta-helix / OB fold / pseudohexamer / T4 tail lysozyme / HUB / gp5-gp27 / Hydrolase-Structural protein COMPLEX |
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機能・相同性 | 機能・相同性情報
symbiont entry into host cell via disruption of host cell wall peptidoglycan / virus tail, baseplate / viral tail assembly / symbiont entry into host cell via disruption of host cell envelope / virus tail / symbiont entry into host / peptidoglycan catabolic process / cell wall macromolecule catabolic process / lysozyme / lysozyme activity ...symbiont entry into host cell via disruption of host cell wall peptidoglycan / virus tail, baseplate / viral tail assembly / symbiont entry into host cell via disruption of host cell envelope / virus tail / symbiont entry into host / peptidoglycan catabolic process / cell wall macromolecule catabolic process / lysozyme / lysozyme activity / killing of cells of another organism / defense response to bacterium / symbiont entry into host cell / identical protein binding類似検索 - 分子機能 Bacteriophage T4, Gp27, baseplate hub, domain 3 / Nucleic acid-binding protein domain / Nuclear Transport Factor 2; Chain: A, - #190 / Phage tail proteins - 2 layer sandwich fold - #40 / Phage tail protein beta-alpha-beta fold - #20 / Bacteriophage T4, Gp27, baseplate hub, C-terminal / Bacteriophage T4, Gp27, baseplate hub, N-terminal / Gp27, baseplate hub, domain 3 / Gp27, baseplate hub, domain 4 / Gp27, baseplate hub, domain 2 ...Bacteriophage T4, Gp27, baseplate hub, domain 3 / Nucleic acid-binding protein domain / Nuclear Transport Factor 2; Chain: A, - #190 / Phage tail proteins - 2 layer sandwich fold - #40 / Phage tail protein beta-alpha-beta fold - #20 / Bacteriophage T4, Gp27, baseplate hub, C-terminal / Bacteriophage T4, Gp27, baseplate hub, N-terminal / Gp27, baseplate hub, domain 3 / Gp27, baseplate hub, domain 4 / Gp27, baseplate hub, domain 2 / Baseplate structural protein, domain 2 / Baseplate structural protein, domain 1 / Protein Gp5, N-terminal OB-fold domain / Gp5, C-terminal / Pre-baseplate central spike protein Gp5 / Gp5 N-terminal OB domain / Gp5 C-terminal repeat (3 copies) / Phage tail protein beta-alpha-beta fold / Phage tail proteins - 2 layer sandwich fold / 3-Layer(bab) Sandwich / Lysozyme - #40 / T4-type lysozyme / Glycoside hydrolase, family 24 / Lysozyme domain superfamily / Phage lysozyme / Elongation Factor Tu (Ef-tu); domain 3 / Nuclear Transport Factor 2; Chain: A, / Lysozyme / OB fold (Dihydrolipoamide Acetyltransferase, E2P) / Lysozyme-like domain superfamily / Trypsin-like serine proteases / Thrombin, subunit H / Peptidase S1, PA clan, chymotrypsin-like fold / Roll / Beta Barrel / 2-Layer Sandwich / Orthogonal Bundle / Mainly Beta / Mainly Alpha / Alpha Beta類似検索 - ドメイン・相同性 : / PHOSPHATE ION / Pre-baseplate central spike protein Gp5 / Baseplate central spike complex protein gp27類似検索 - 構成要素 |
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生物種 | Enterobacteria phage T4 (ファージ) |
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手法 | X線回折 / シンクロトロン / 多重同系置換 / 解像度: 2.8 Å |
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データ登録者 | Kanamaru, S. / Ishiwata, Y. / Suzuki, T. / Rossmann, M.G. / Arisaka, F. |
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引用 | ジャーナル: J.Mol.Biol. / 年: 2005 タイトル: Control of bacteriophage t4 tail lysozyme activity during the infection process 著者: Kanamaru, S. / Ishiwata, Y. / Suzuki, T. / Rossmann, M.G. / Arisaka, F. |
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履歴 | 登録 | 2004年11月23日 | 登録サイト: PDBJ / 処理サイト: PDBJ |
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改定 1.0 | 2005年3月8日 | Provider: repository / タイプ: Initial release |
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改定 1.1 | 2008年4月30日 | Group: Version format compliance |
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改定 1.2 | 2011年7月13日 | Group: Derived calculations / Version format compliance |
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改定 1.3 | 2021年11月10日 | Group: Database references / Derived calculations カテゴリ: database_2 / struct_conn ...database_2 / struct_conn / struct_ref_seq_dif / struct_site Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession ..._database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_conn.ptnr1_auth_comp_id / _struct_conn.ptnr1_auth_seq_id / _struct_conn.ptnr1_label_asym_id / _struct_conn.ptnr1_label_atom_id / _struct_conn.ptnr1_label_comp_id / _struct_conn.ptnr1_label_seq_id / _struct_conn.ptnr1_symmetry / _struct_conn.ptnr2_auth_comp_id / _struct_conn.ptnr2_auth_seq_id / _struct_conn.ptnr2_label_asym_id / _struct_conn.ptnr2_label_atom_id / _struct_conn.ptnr2_label_comp_id / _struct_conn.ptnr2_label_seq_id / _struct_conn.ptnr2_symmetry / _struct_ref_seq_dif.details / _struct_site.pdbx_auth_asym_id / _struct_site.pdbx_auth_comp_id / _struct_site.pdbx_auth_seq_id |
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改定 1.4 | 2023年10月25日 | Group: Data collection / Refinement description カテゴリ: chem_comp_atom / chem_comp_bond / pdbx_initial_refinement_model |
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