- PDB-1weu: Solution structure of PHD domain in ING1-like protein BAC25009 -
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基本情報
登録情報
データベース: PDB / ID: 1weu
タイトル
Solution structure of PHD domain in ING1-like protein BAC25009
要素
inhibitor of growth family, member 4
キーワード
DNA BINDING PROTEIN / structural genomics / PHD domain / ING1-like protein / NPPSFA / National Project on Protein Structural and Functional Analyses / RIKEN Structural Genomics/Proteomics Initiative / RSGI
機能・相同性
機能・相同性情報
regulation of DNA biosynthetic process / histone H4K12 acetyltransferase activity / DNA replication-dependent chromatin disassembly / histone H3K14 acetyltransferase activity / histone H4K5 acetyltransferase activity / histone H4K8 acetyltransferase activity / HATs acetylate histones / negative regulation of growth / regulation of cell cycle G2/M phase transition / intermediate filament cytoskeleton ...regulation of DNA biosynthetic process / histone H4K12 acetyltransferase activity / DNA replication-dependent chromatin disassembly / histone H3K14 acetyltransferase activity / histone H4K5 acetyltransferase activity / histone H4K8 acetyltransferase activity / HATs acetylate histones / negative regulation of growth / regulation of cell cycle G2/M phase transition / intermediate filament cytoskeleton / positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator / histone acetyltransferase complex / methylated histone binding / regulation of cell growth / transcription coactivator activity / regulation of cell cycle / positive regulation of apoptotic process / cell cycle / negative regulation of cell population proliferation / negative regulation of DNA-templated transcription / apoptotic process / regulation of DNA-templated transcription / nucleoplasm / nucleus / metal ion binding / cytosol 類似検索 - 分子機能
タイプ: Bruker AVANCE / 製造業者: Bruker / モデル: AVANCE / 磁場強度: 700 MHz
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解析
NMR software
名称
バージョン
開発者
分類
XwinNMR
2.6
Bruker
collection
NMRPipe
20020425
Delaglio,F.
解析
NMRView
5.0.4
Johnson,B.A.
データ解析
KUJIRA
0.863
Cobayashi,N.
データ解析
CYANA
2.0.17
Guentert,P.
構造決定
CYANA
2.0.17
Guentert,P.
精密化
精密化
手法: torsion angle dynamics / ソフトェア番号: 1
代表構造
選択基準: lowest energy
NMRアンサンブル
コンフォーマー選択の基準: structures with the least restraint violations, structures with the lowest energy, target function 計算したコンフォーマーの数: 100 / 登録したコンフォーマーの数: 20