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- PDB-1scv: NMR STRUCTURE OF THE C TERMINAL DOMAIN OF CARDIAC TROPONIN C BOUN... -
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Open data
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Basic information
Entry | Database: PDB / ID: 1scv | ||||||
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Title | NMR STRUCTURE OF THE C TERMINAL DOMAIN OF CARDIAC TROPONIN C BOUND TO THE N TERMINAL DOMAIN OF CARDIAC TROPONIN I | ||||||
![]() | Troponin C, slow skeletal and cardiac muscles | ||||||
![]() | CONTRACTILE PROTEIN / STRUCTURAL PROTEIN / TROPONIN C-TROPONIN I INTERACTION / CARDIAC / MUSCLE PROTEIN / CALCIUM BINDING PROTEIN | ||||||
Function / homology | ![]() cardiac Troponin complex / Striated Muscle Contraction / myosin II complex / troponin I binding / skeletal muscle contraction / cardiac muscle contraction / calcium-dependent protein binding / calcium ion binding Similarity search - Function | ||||||
Biological species | ![]() ![]() | ||||||
Method | SOLUTION NMR / DGSA | ||||||
![]() | Finley, N.L. / Howarth, J.W. / Rosevear, P.R. | ||||||
![]() | ![]() Title: Structure of the Mg2+-loaded C-lobe of cardiac troponin C bound to the N-domain of cardiac troponin I: comparison with the Ca2+-loaded structure. Authors: Finley, N.L. / Howarth, J.W. / Rosevear, P.R. #1: ![]() Title: Solution structures of the C-terminal domain of cardiac troponin C free and bound to the N-terminal domain of cardiac troponin I Authors: Gasmi-Seabrook, G.M. / Howarth, J.W. / Finley, N. / Abusamhadneh, E. / Gaponenko, V. / Brito, R.M. / Solaro, R.J. / Rosevear, P.R. | ||||||
History |
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Remark 650 | HELIX DETERMINATION METHOD: AUTHOR | ||||||
Remark 700 | SHEET DETERMINATION METHOD: AUTHOR |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 502.1 KB | Display | ![]() |
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PDB format | ![]() | 419.9 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
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-Validation report
Summary document | ![]() | 340 KB | Display | ![]() |
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Full document | ![]() | 474.6 KB | Display | |
Data in XML | ![]() | 25.5 KB | Display | |
Data in CIF | ![]() | 41.6 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
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Links
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Assembly
Deposited unit | ![]()
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NMR ensembles |
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Components
#1: Protein | Mass: 9463.531 Da / Num. of mol.: 1 / Fragment: C-terminal domain (RESIDUES 81 - 161) Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() ![]() ![]() |
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#2: Chemical |
-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||||||
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NMR experiment |
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NMR details | Text: BEST 20 STRUCTURES. THESE STRUCTURES WERE DETERMINED USING TRIPLE-RESONANCE NMR SPECTROSCOPY ON CA2+_SATURATED 15N, 13C-CTNC(81-161) BOUND TO CTNI(33-80). |
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Sample preparation
Details | Contents: 1MM [15N,13C]CTNC(81-161)/CTNI(33-80), 20MM TRIS-D11, 100MM KCL, 20MM DTT, 15MM CACL2, 0.1MM LEUPETIN, 0.1MM PEFABLOC; 90% H2O, 10% D2O Solvent system: 90% H2O/10% D2O |
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Sample conditions | Ionic strength: 100mM KCL, 15mM CACL2 / pH: 6.80 / Pressure: AMBIENT / Temperature: 318.00 K |
-NMR measurement
Radiation | Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M | |||||||||||||||
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Radiation wavelength | Relative weight: 1 | |||||||||||||||
NMR spectrometer |
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Processing
NMR software |
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Refinement | Method: DGSA / Software ordinal: 1 Details: The structures are based on a total of 926 restraints, 787 are NOE-derived distance restraints, 91 dihedral angle restraints, 4 distance restraints from hydrogen bonds and 44 dipolar coupling restraints. | ||||||||||||||||
NMR representative | Selection criteria: lowest energy | ||||||||||||||||
NMR ensemble | Conformer selection criteria: structures with the lowest energy Conformers calculated total number: 20 / Conformers submitted total number: 20 |