+Open data
-Basic information
Entry | Database: PDB / ID: 1rsu | ||||||
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Title | COMPLEX BETWEEN STREPTAVIDIN AND THE STREP-TAG II PEPTIDE | ||||||
Components |
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Keywords | COMPLEX (SIGNAL PROTEIN/PEPTIDE) / COMPLEX (SIGNAL PROTEIN-PEPTIDE) / SIGNAL PROTEIN / COMPLEX (SIGNAL PROTEIN-PEPTIDE) complex | ||||||
Function / homology | Function and homology information | ||||||
Biological species | Streptomyces avidinii (bacteria) | ||||||
Method | X-RAY DIFFRACTION / Resolution: 1.7 Å | ||||||
Authors | Koepke, J. / Schmidt, T. / Skerra, A. | ||||||
Citation | Journal: J.Mol.Biol. / Year: 1996 Title: Molecular interaction between the Strep-tag affinity peptide and its cognate target, streptavidin. Authors: Schmidt, T.G. / Koepke, J. / Frank, R. / Skerra, A. #1: Journal: J.Chromatogr.,A / Year: 1994 Title: One-Step Affinity Purification of Bacterially Produced Proteins by Means of the 'Strep Tag' and Immobilized Recombinant Core Streptavidin Authors: Schmidt, T.G. / Skerra, A. #2: Journal: Protein Eng. / Year: 1993 Title: The Random Peptide Library-Assisted Engineering of a C-Terminal Affinity Peptide, Useful for the Detection and Purification of a Functional Ig Fv Fragment Authors: Schmidt, T.G. / Skerra, A. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1rsu.cif.gz | 48.8 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1rsu.ent.gz | 35.5 KB | Display | PDB format |
PDBx/mmJSON format | 1rsu.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/rs/1rsu ftp://data.pdbj.org/pub/pdb/validation_reports/rs/1rsu | HTTPS FTP |
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-Related structure data
-Links
-Assembly
Deposited unit |
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1 |
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Unit cell |
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Components on special symmetry positions |
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-Components
#1: Protein | Mass: 13341.454 Da / Num. of mol.: 1 / Fragment: RESIDUES 13 - 139 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Streptomyces avidinii (bacteria) / Plasmid: PSA1 / Production host: Escherichia coli (E. coli) / References: UniProt: P22629 |
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#2: Protein/peptide | Mass: 1261.341 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source |
#3: Water | ChemComp-HOH / |
-Experimental details
-Experiment
Experiment | Method: X-RAY DIFFRACTION |
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-Sample preparation
Crystal | Density Matthews: 2.58 Å3/Da / Density % sol: 49 % | ||||||||||||||||||||||||
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Crystal grow | *PLUS pH: 7 / Method: vapor diffusion, hanging drop | ||||||||||||||||||||||||
Components of the solutions | *PLUS
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-Data collection
Diffraction source | Wavelength: 1.5418 |
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Detector | Type: RIGAKU / Detector: IMAGE PLATE / Date: Jun 13, 1994 |
Radiation | Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Wavelength: 1.5418 Å / Relative weight: 1 |
Reflection | Resolution: 1.7→37.38 Å / Num. obs: 16909 / % possible obs: 97.2 % / Observed criterion σ(I): 0 / Rmerge(I) obs: 0.0923 |
-Processing
Software |
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Refinement | Resolution: 1.7→8 Å / σ(F): 2
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Displacement parameters | Biso mean: 20.2 Å2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refine analyze | Luzzati coordinate error obs: 0.18 Å | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement step | Cycle: LAST / Resolution: 1.7→8 Å
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Refine LS restraints |
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Software | *PLUS Name: X-PLOR / Version: 3.1 / Classification: refinement | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement | *PLUS Rfactor obs: 0.18 / Rfactor Rwork: 0.18 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Solvent computation | *PLUS | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Displacement parameters | *PLUS | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refine LS restraints | *PLUS
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