[English] 日本語
![](img/lk-miru.gif)
- PDB-1nzy: 4-CHLOROBENZOYL COENZYME A DEHALOGENASE FROM PSEUDOMONAS SP. STRA... -
+
Open data
-
Basic information
Entry | Database: PDB / ID: 1nzy | ||||||
---|---|---|---|---|---|---|---|
Title | 4-CHLOROBENZOYL COENZYME A DEHALOGENASE FROM PSEUDOMONAS SP. STRAIN CBS-3 | ||||||
![]() | (4-CHLOROBENZOYL COENZYME A ...) x 2 | ||||||
![]() | LYASE | ||||||
Function / homology | ![]() 4-chlorobenzoyl-CoA dehalogenase / 4-chlorobenzoyl-CoA dehalogenase activity / coenzyme A metabolic process Similarity search - Function | ||||||
Biological species | ![]() ![]() | ||||||
Method | ![]() | ||||||
![]() | Benning, M.M. / Holden, H.M. | ||||||
![]() | ![]() Title: Structure of 4-chlorobenzoyl coenzyme A dehalogenase determined to 1.8 A resolution: an enzyme catalyst generated via adaptive mutation. Authors: Benning, M.M. / Taylor, K.L. / Liu, R.-.Q. / Yang, G. / Xiang, H. / Wesenberg, G. / Dunaway-Mariano, D. / Holden, H.M. | ||||||
History |
|
-
Structure visualization
Structure viewer | Molecule: ![]() ![]() |
---|
-
Downloads & links
-
Download
PDBx/mmCIF format | ![]() | 186.6 KB | Display | ![]() |
---|---|---|---|---|
PDB format | ![]() | 147 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 572.3 KB | Display | ![]() |
---|---|---|---|---|
Full document | ![]() | 600.9 KB | Display | |
Data in XML | ![]() | 21 KB | Display | |
Data in CIF | ![]() | 33.3 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Similar structure data |
---|
-
Links
-
Assembly
Deposited unit | ![]()
| ||||||||
---|---|---|---|---|---|---|---|---|---|
1 | ![]()
| ||||||||
2 |
| ||||||||
Unit cell |
|
-
Components
-4-CHLOROBENZOYL COENZYME A ... , 2 types, 3 molecules ACB
#1: Protein | Mass: 29898.469 Da / Num. of mol.: 2 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() ![]() #2: Protein | | Mass: 29899.457 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() ![]() |
---|
-Non-polymers , 5 types, 607 molecules ![](data/chem/img/CA.gif)
![](data/chem/img/BCA.gif)
![](data/chem/img/PO4.gif)
![](data/chem/img/EDO.gif)
![](data/chem/img/HOH.gif)
![](data/chem/img/BCA.gif)
![](data/chem/img/PO4.gif)
![](data/chem/img/EDO.gif)
![](data/chem/img/HOH.gif)
#3: Chemical | #4: Chemical | #5: Chemical | ChemComp-PO4 / | #6: Chemical | #7: Water | ChemComp-HOH / | |
---|
-Experimental details
-Experiment
Experiment | Method: ![]() |
---|
-
Sample preparation
Crystal | Density Matthews: 2.78 Å3/Da / Density % sol: 55.71 % | ||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Crystal grow | *PLUS Temperature: 4 ℃ / pH: 9 / Method: batch method / Details: used to seeding | ||||||||||||||||||||||||||||||
Components of the solutions | *PLUS
|
-Data collection
Radiation | Scattering type: x-ray |
---|---|
Radiation wavelength | Relative weight: 1 |
Reflection | *PLUS Highest resolution: 1.8 Å / Lowest resolution: 30.3 Å / % possible obs: 98 % / Rmerge(I) obs: 0.036 |
-
Processing
Software |
| ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Refinement | Rfactor Rwork: 0.188 / Highest resolution: 1.8 Å / Details: TNT | ||||||||||||
Refinement step | Cycle: LAST / Highest resolution: 1.8 Å
| ||||||||||||
Software | *PLUS Name: TNT / Classification: refinement | ||||||||||||
Refinement | *PLUS Lowest resolution: 30 Å / Rfactor obs: 0.188 | ||||||||||||
Solvent computation | *PLUS | ||||||||||||
Displacement parameters | *PLUS | ||||||||||||
Refine LS restraints | *PLUS
|