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Open data
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Basic information
Entry | Database: PDB / ID: 1new | ||||||||||||
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Title | Cytochrome C551.5, NMR | ||||||||||||
![]() | CYTOCHROME C551.5 | ||||||||||||
![]() | ELECTRON TRANSPORT / CYTOCHROME / MULTIHEME CYTOCHROME / CYTOCHROME C7 | ||||||||||||
Function / homology | ![]() anaerobic respiration / electron transfer activity / heme binding / metal ion binding Similarity search - Function | ||||||||||||
Biological species | ![]() | ||||||||||||
Method | SOLUTION NMR / TORSION ANGLE MOLECULAR DYNAMICS | ||||||||||||
![]() | Assfalg, M. / Banci, L. / Bertini, I. / Bruschi, M. / Turano, P. | ||||||||||||
![]() | ![]() Title: 800 MHz 1H NMR solution structure refinement of oxidized cytochrome c7 from Desulfuromonas acetoxidans. Authors: Assfalg, M. / Banci, L. / Bertini, I. / Bruschi, M. / Turano, P. #1: ![]() Title: NMR Characterization and Solution Structure Determination of the Oxidized Cytochrome C7 from Desulfuromonas Acetoxidans Authors: Banci, L. / Bertini, I. / Bruschi, M. / Sompornpisut, P. / Turano, P. #2: ![]() Title: Structure of the Three-Haem Core of Cytochrome C551.5 Determined by 1H NMR Authors: Coutinho, I.B. / Turner, D.L. / Liu, M.Y. / Legall, J. / Xavier, A.V. #3: ![]() Title: Nuclear-Magnetic-Resonance Studies of Desulfuromonas Acetoxidans Cytochrome C551.5 (C7) Authors: Moura, J.G. / Moore, G.R. / Williams, R.J. / Probst, I. / Legall, J. / Xavier, A.V. #4: ![]() Title: The Amino Acid Resequence of Cytochrome C-551.5 (Cytochrome C7) from the Green Photosynthetic Bacterium Chloropseudomonas Ethylica Authors: Ambler, R.P. | ||||||||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 825.1 KB | Display | ![]() |
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PDB format | ![]() | 718.7 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 585.2 KB | Display | ![]() |
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Full document | ![]() | 789.4 KB | Display | |
Data in XML | ![]() | 44.1 KB | Display | |
Data in CIF | ![]() | 70.4 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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NMR ensembles |
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Components
#1: Protein | Mass: 7280.309 Da / Num. of mol.: 1 / Source method: isolated from a natural source Details: CLASS III OF C-TYPE CYTOCHROMES, FULLY OXIDIZED FORM Source: (natural) ![]() |
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#2: Chemical |
-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
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NMR experiment | Type: NOESY |
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Sample preparation
Sample conditions | pH: 6.5 / Temperature: 298 K |
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Crystal grow | *PLUS Method: other / Details: NMR |
-NMR measurement
NMR spectrometer | Type: Bruker DMX800 / Manufacturer: Bruker / Model: DMX800 / Field strength: 800 MHz |
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Processing
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NMR software |
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Refinement | Method: TORSION ANGLE MOLECULAR DYNAMICS / Software ordinal: 1 / Details: ENERGY MINIMIZATION BY THE SANDER MODULE OF AMBER | |||||||||
NMR ensemble | Conformer selection criteria: MINIMUM TARGET FUNCTION VALUE / Conformers calculated total number: 1000 / Conformers submitted total number: 35 |