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- PDB-1lmq: THE CRYSTAL STRUCTURES OF THREE COMPLEXES BETWEEN CHITOOLIGOSACCH... -
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Open data
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Basic information
Entry | Database: PDB / ID: 1lmq | ||||||||||||
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Title | THE CRYSTAL STRUCTURES OF THREE COMPLEXES BETWEEN CHITOOLIGOSACCHARIDES AND LYSOZYME FROM THE RAINBOW TROUT | ||||||||||||
![]() | LYSOZYME | ||||||||||||
![]() | HYDROLASE (O-GLYCOSYL) | ||||||||||||
Function / homology | ![]() lysozyme / lysozyme activity / defense response to Gram-negative bacterium / killing of cells of another organism / defense response to Gram-positive bacterium / extracellular space Similarity search - Function | ||||||||||||
Biological species | ![]() ![]() | ||||||||||||
Method | ![]() | ||||||||||||
![]() | Karlsen, S. / Hough, E. | ||||||||||||
![]() | ![]() Title: Crystal structures of three complexes between chito-oligosaccharides and lysozyme from the rainbow trout. How distorted is the NAG sugar in site D? Authors: Karlsen, S. / Hough, E. #1: ![]() Title: The Refined Crystal Structure of Lysozyme from Rainbow Trout (Oncorhynchus Mykiss) Authors: Karlsen, S. / Eliassen, B.E. / Hansen, L.Kr. / Larsen, R.L. / Riise, B.W. / Smalaas, A.O. / Hough, E. / Grinde, B. #2: ![]() Title: Purification and Characterization of Two Lysozymes from Rainbow Trout (Salmo Gairdneri) Authors: Grinde, B. / Jolles, J. / Jolles, P. | ||||||||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 38.9 KB | Display | ![]() |
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PDB format | ![]() | 29.5 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Arichive directory | ![]() ![]() | HTTPS FTP |
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-Related structure data
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Links
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Assembly
Deposited unit | ![]()
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Unit cell |
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Components
#1: Protein | Mass: 14303.068 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) ![]() ![]() |
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#2: Polysaccharide | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2- ...2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose Source method: isolated from a genetically manipulated source |
#3: Water | ChemComp-HOH / |
-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 3.21 Å3/Da / Density % sol: 61.64 % | |||||||||||||||||||||||||||||||||||
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Crystal grow | *PLUS Temperature: 277 K / Method: vapor diffusion, hanging drop / PH range low: 10.5 / PH range high: 9.5 | |||||||||||||||||||||||||||||||||||
Components of the solutions | *PLUS
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-Data collection
Diffraction source | Wavelength: 1.5418 Å |
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Detector | Type: ENRAF-NONIUS FAST / Detector: DIFFRACTOMETER / Date: Jul 1, 1994 |
Radiation | Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Wavelength: 1.5418 Å / Relative weight: 1 |
Reflection | Num. obs: 22072 / % possible obs: 89.9 % / Observed criterion σ(I): 3 / Rmerge(I) obs: 0.033 |
Reflection | *PLUS Highest resolution: 1.6 Å / Lowest resolution: 14.65 Å / Rmerge(I) obs: 0.033 |
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Processing
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Refinement | Resolution: 1.6→8 Å / σ(F): 3 /
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Refinement step | Cycle: LAST / Resolution: 1.6→8 Å
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Refine LS restraints |
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