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Yorodumi- PDB-1krs: SOLUTION STRUCTURE OF THE ANTICODON BINDING DOMAIN OF ESCHERICHIA... -
+Open data
-Basic information
Entry | Database: PDB / ID: 1krs | ||||||
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Title | SOLUTION STRUCTURE OF THE ANTICODON BINDING DOMAIN OF ESCHERICHIA COLI LYSYL-TRNA SYNTHETASE AND STUDIES OF ITS INTERACTIONS WITH TRNA-LYS | ||||||
Components | LYSYL-TRNA SYNTHETASE (PRODUCT OF LYSS GENE) | ||||||
Keywords | AMINOACYL-TRNA SYNTHETASE | ||||||
Function / homology | Function and homology information lysine-tRNA ligase / lysine-tRNA ligase activity / lysyl-tRNA aminoacylation / tRNA aminoacylation for protein translation / ligase activity / tRNA binding / magnesium ion binding / protein homodimerization activity / ATP binding / membrane / cytosol Similarity search - Function | ||||||
Biological species | Escherichia coli (E. coli) | ||||||
Method | SOLUTION NMR | ||||||
Authors | Commans, S. / Dardel, F. | ||||||
Citation | Journal: J.Mol.Biol. / Year: 1995 Title: Solution structure of the anticodon-binding domain of Escherichia coli lysyl-tRNA synthetase and studies of its interaction with tRNA(Lys). Authors: Commans, S. / Plateau, P. / Blanquet, S. / Dardel, F. #1: Journal: Nucleic Acids Res. / Year: 1990 Title: Homology of Lyss and Lysu, the Two Escherichia Coli Genes Encoding Distinct Lysyl-tRNA Synthetase Species Authors: Leveque, F. / Plateau, P. / Dessen, P. / Blanquet, S. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1krs.cif.gz | 43.7 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1krs.ent.gz | 33.8 KB | Display | PDB format |
PDBx/mmJSON format | 1krs.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/kr/1krs ftp://data.pdbj.org/pub/pdb/validation_reports/kr/1krs | HTTPS FTP |
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-Related structure data
-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein | Mass: 13544.372 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Escherichia coli (E. coli) / Strain: JM101TR / Description: PTRC99A (IPTG-INDUCIBLE LAC PROMOTER) / Gene: LYSS CODONS 40 - 149 / Plasmid: PTRC-ND / Gene (production host): LYSS CODONS 40 - 149 / Production host: Escherichia coli (E. coli) / References: UniProt: P0A8N3, lysine-tRNA ligase |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
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-Sample preparation
Crystal grow | *PLUS Method: other / Details: NMR |
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-Processing
Software |
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NMR software | Name: X-PLOR / Version: 3.1 / Developer: BRUNGER / Classification: refinement | ||||||||||||
NMR ensemble | Conformers submitted total number: 1 |