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Yorodumi- PDB-1kdu: SEQUENTIAL 1H NMR ASSIGNMENTS AND SECONDARY STRUCTURE OF THE KRIN... -
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-Basic information
Entry | Database: PDB / ID: 1kdu | ||||||
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Title | SEQUENTIAL 1H NMR ASSIGNMENTS AND SECONDARY STRUCTURE OF THE KRINGLE DOMAIN FROM UROKINASE | ||||||
Components | PLASMINOGEN ACTIVATOR | ||||||
Keywords | PLASMINOGEN ACTIVATION | ||||||
Function / homology | Function and homology information u-plasminogen activator / regulation of smooth muscle cell-matrix adhesion / urokinase plasminogen activator signaling pathway / regulation of plasminogen activation / regulation of fibrinolysis / regulation of wound healing / protein complex involved in cell-matrix adhesion / negative regulation of plasminogen activation / regulation of smooth muscle cell migration / regulation of signaling receptor activity ...u-plasminogen activator / regulation of smooth muscle cell-matrix adhesion / urokinase plasminogen activator signaling pathway / regulation of plasminogen activation / regulation of fibrinolysis / regulation of wound healing / protein complex involved in cell-matrix adhesion / negative regulation of plasminogen activation / regulation of smooth muscle cell migration / regulation of signaling receptor activity / serine-type endopeptidase complex / Dissolution of Fibrin Clot / smooth muscle cell migration / plasminogen activation / regulation of cell adhesion mediated by integrin / tertiary granule membrane / negative regulation of fibrinolysis / regulation of cell adhesion / specific granule membrane / serine protease inhibitor complex / fibrinolysis / chemotaxis / blood coagulation / regulation of cell population proliferation / response to hypoxia / positive regulation of cell migration / external side of plasma membrane / serine-type endopeptidase activity / focal adhesion / Neutrophil degranulation / cell surface / signal transduction / proteolysis / extracellular space / extracellular exosome / extracellular region / plasma membrane Similarity search - Function | ||||||
Biological species | Homo sapiens (human) | ||||||
Method | SOLUTION NMR | ||||||
Authors | Li, X. / Bokman, A.M. / Llinas, M. / Smith, R.A.G. / Dobson, C.M. | ||||||
Citation | Journal: J.Mol.Biol. / Year: 1994 Title: Solution structure of the kringle domain from urokinase-type plasminogen activator. Authors: Li, X. / Bokman, A.M. / Llinas, M. / Smith, R.A. / Dobson, C.M. #1: Journal: To be Published Title: Solution Structure of the Kringle Domain from the Urokinase-Type Plasminogen Activator Authors: Li, X. / Bokman, A.M. / Llinas, M. / Smith, R.A.G. / Dobson, C.M. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1kdu.cif.gz | 37.1 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1kdu.ent.gz | 25.2 KB | Display | PDB format |
PDBx/mmJSON format | 1kdu.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 1kdu_validation.pdf.gz | 344 KB | Display | wwPDB validaton report |
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Full document | 1kdu_full_validation.pdf.gz | 350.6 KB | Display | |
Data in XML | 1kdu_validation.xml.gz | 4.2 KB | Display | |
Data in CIF | 1kdu_validation.cif.gz | 5.2 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/kd/1kdu ftp://data.pdbj.org/pub/pdb/validation_reports/kd/1kdu | HTTPS FTP |
-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein | Mass: 9753.018 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Homo sapiens (human) / References: UniProt: P00749 |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
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-Processing
Software |
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NMR software | Name: X-PLOR / Developer: BRUNGER / Classification: refinement | ||||||||
NMR ensemble | Conformers submitted total number: 1 |