+Open data
-Basic information
Entry | Database: PDB / ID: 1jmn | ||||||
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Title | Solution Structure of the Viscotoxin A2 | ||||||
Components | viscotoxin A2 | ||||||
Keywords | TOXIN / thionin / viscotoxin / Viscum album | ||||||
Function / homology | Function and homology information | ||||||
Biological species | Viscum album (European mistletoe) | ||||||
Method | SOLUTION NMR | ||||||
Authors | Mosbah, A. / Coulon, A. / Bernard, C. / Urech, K. / Rouge, P. / Darbon, H. | ||||||
Citation | Journal: TO BE PUBLISHED Title: Solution Structure of the Viscotoxin A2 Authors: Mosbah, A. / Coulon, A. / Bernard, C. / Urech, K. / Rouge, P. / Darbon, H. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1jmn.cif.gz | 253.8 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1jmn.ent.gz | 220.5 KB | Display | PDB format |
PDBx/mmJSON format | 1jmn.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 1jmn_validation.pdf.gz | 345 KB | Display | wwPDB validaton report |
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Full document | 1jmn_full_validation.pdf.gz | 470.9 KB | Display | |
Data in XML | 1jmn_validation.xml.gz | 16.8 KB | Display | |
Data in CIF | 1jmn_validation.cif.gz | 28.4 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/jm/1jmn ftp://data.pdbj.org/pub/pdb/validation_reports/jm/1jmn | HTTPS FTP |
-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein/peptide | Mass: 4839.519 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Viscum album (European mistletoe) / Production host: Escherichia coli (E. coli) / References: UniProt: P32880 |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||
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NMR experiment |
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-Sample preparation
Sample conditions | pH: 5 / Temperature: 300 K |
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-NMR measurement
Radiation | Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M |
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Radiation wavelength | Relative weight: 1 |
NMR spectrometer | Type: Bruker DRX / Manufacturer: Bruker / Model: DRX / Field strength: 500 MHz |
-Processing
NMR software | Name: CNS / Version: 1 / Developer: BRUNGER / Classification: refinement |
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NMR representative | Selection criteria: fewest violations,lowest energy |
NMR ensemble | Conformer selection criteria: back calculated data agree with experimental NOESY spectrum, structures with acceptable covalent geometry, structures with favorable non-bond energy Conformers calculated total number: 40 / Conformers submitted total number: 20 |