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- PDB-1hrr: THE THREE DIMENSIONAL STRUCTURE OF THE REDUCED HIGH POTENTIAL IRO... -

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Entry
Database: PDB / ID: 1hrr
TitleTHE THREE DIMENSIONAL STRUCTURE OF THE REDUCED HIGH POTENTIAL IRON-SULFUR PROTEIN FROM CHROMATIUM VINOSUM THROUGH NMR
ComponentsREDUCED HIGH POTENTIAL IRON SULFUR PROTEIN
KeywordsELECTRON TRANSFER (IRON-SULFUR)
Function / homology
Function and homology information


aerobic electron transport chain / 4 iron, 4 sulfur cluster binding / periplasmic space / electron transfer activity / metal ion binding
Similarity search - Function
High potential iron-sulphur protein / High-Potential Iron-Sulfur Protein; Chain A / High potential iron-sulfur protein / High potential iron-sulphur protein / High potential iron-sulphur protein superfamily / High potential iron-sulfur proteins family profile. / Twin arginine translocation (Tat) signal profile. / Twin-arginine translocation pathway, signal sequence / Few Secondary Structures / Irregular
Similarity search - Domain/homology
IRON/SULFUR CLUSTER / High-potential iron-sulfur protein
Similarity search - Component
Biological speciesAllochromatium vinosum (bacteria)
MethodSOLUTION NMR
AuthorsBanci, L. / Bertini, I. / Dikiy, A. / Kastrau, D.H.W. / Luchinat, C. / Sompornpisut, P.
Citation
Journal: Biochemistry / Year: 1995
Title: The three-dimensional solution structure of the reduced high-potential iron-sulfur protein from Chromatium vinosum through NMR.
Authors: Banci, L. / Bertini, I. / Dikiy, A. / Kastrau, D.H. / Luchinat, C. / Sompornpisut, P.
#1: Journal: Biochemistry / Year: 1992
Title: Sequence-Specific Assignments of the 1H Nuclear Magnetic Resonance Spectra of Reduced High-Potential Ferredoxin (Hipip) from Chromatium Vinosum
Authors: Gaillard, J. / Albrand, J.-P. / Moulis, J.-M. / Wemmer, D.E.
#2: Journal: J.Am.Chem.Soc. / Year: 1992
Title: Identification of the Iron Ions of High Potential Iron Protein from Chromatium Vinosum within the Protein Frame Through Two-Dimensional NMR Experiments
Authors: Bertini, I. / Capozzi, F. / Ciurli, S. / Luchinat, C. / Messori, L. / Piccioli, M.
#3: Journal: J.Biol.Chem. / Year: 1974
Title: Two-Angstrom Crystal Structure of Oxidized Chromatium High Potential Iron Protein
Authors: Carter Junior, C.W. / Kraut, J. / Freer, S.T. / Xuong, N.-H. / Alden, R.A. / Bartsch, R.G.
History
DepositionJan 17, 1995Processing site: BNL
Revision 1.0Jul 31, 1995Provider: repository / Type: Initial release
Revision 1.1Mar 24, 2008Group: Version format compliance
Revision 1.2Jul 13, 2011Group: Version format compliance
Revision 1.3Feb 23, 2022Group: Data collection / Database references ...Data collection / Database references / Derived calculations / Other
Category: database_2 / pdbx_database_status ...database_2 / pdbx_database_status / pdbx_nmr_software / pdbx_struct_assembly / pdbx_struct_oper_list / struct_site
Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession ..._database_2.pdbx_DOI / _database_2.pdbx_database_accession / _pdbx_database_status.process_site / _pdbx_nmr_software.name / _struct_site.pdbx_auth_asym_id / _struct_site.pdbx_auth_comp_id / _struct_site.pdbx_auth_seq_id
Revision 1.4May 22, 2024Group: Data collection / Category: chem_comp_atom / chem_comp_bond

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Assembly

Deposited unit
A: REDUCED HIGH POTENTIAL IRON SULFUR PROTEIN
hetero molecules


Theoretical massNumber of molelcules
Total (without water)9,2652
Polymers8,9131
Non-polymers3521
Water00
1


  • Idetical with deposited unit
  • defined by author
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
NMR ensembles
DataCriteria
Number of conformers (submitted / calculated)15 / -
Representative

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Components

#1: Protein REDUCED HIGH POTENTIAL IRON SULFUR PROTEIN / HIPIP


Mass: 8912.928 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Details: NMR, 15 STRUCTURES / Source: (natural) Allochromatium vinosum (bacteria) / References: UniProt: P00260
#2: Chemical ChemComp-SF4 / IRON/SULFUR CLUSTER


Mass: 351.640 Da / Num. of mol.: 1 / Source method: obtained synthetically / Formula: Fe4S4

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Experimental details

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Experiment

ExperimentMethod: SOLUTION NMR

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Sample preparation

Crystal grow
*PLUS
Method: other / Details: NMR

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Processing

SoftwareName: AMBER / Classification: refinement
NMR software
NameVersionDeveloperClassification
DIANAGUENTERT,BRAUN,WUTHRICHrefinement
Amber4PEARLMAN,CASE,CALDWELL,SIEBEL,SINGH,WEINER,KOLLMANrefinement
NMR ensembleConformers submitted total number: 15

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