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- PDB-1noe: NMR STUDY OF REDUCED HIGH POTENTIAL IRON SULFUR PROTEIN -

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Basic information

Entry
Database: PDB / ID: 1noe
TitleNMR STUDY OF REDUCED HIGH POTENTIAL IRON SULFUR PROTEIN
ComponentsHIGH POTENTIAL IRON SULFUR PROTEIN
KeywordsELECTRON TRANSPORT / IRON-SULFUR / 4FE-4S
Function / homology
Function and homology information


aerobic electron transport chain / 4 iron, 4 sulfur cluster binding / periplasmic space / electron transfer activity / metal ion binding
Similarity search - Function
High potential iron-sulphur protein / High-Potential Iron-Sulfur Protein; Chain A / High potential iron-sulfur protein / High potential iron-sulphur protein / High potential iron-sulphur protein superfamily / High potential iron-sulfur proteins family profile. / Twin arginine translocation (Tat) signal profile. / Twin-arginine translocation pathway, signal sequence / Few Secondary Structures / Irregular
Similarity search - Domain/homology
IRON/SULFUR CLUSTER / High-potential iron-sulfur protein
Similarity search - Component
Biological speciesAllochromatium vinosum (bacteria)
MethodSOLUTION NMR
AuthorsBentrop, D. / Bertini, I. / Capozzi, F. / Dikiy, A. / Eltis, L. / Luchinat, C.
Citation
Journal: Biochemistry / Year: 1996
Title: Three-dimensional structure of the reduced C77S mutant of the Chromatium vinosum high-potential iron-sulfur protein through nuclear magnetic resonance: comparison with the solution structure ...Title: Three-dimensional structure of the reduced C77S mutant of the Chromatium vinosum high-potential iron-sulfur protein through nuclear magnetic resonance: comparison with the solution structure of the wild-type protein.
Authors: Bentrop, D. / Bertini, I. / Capozzi, F. / Dikiy, A. / Eltis, L. / Luchinat, C.
#1: Journal: J.Am.Chem.Soc. / Year: 1996
Title: A Serine->Cysteine Ligand Mutation in the High Potential Iron-Sulfur Protein from Chromatium Vinosum Provides Insight Into the Electronic Structure of the [4Fe-4S] Cluster
Authors: Babini, E. / Bertini, I. / Borsari, M. / Capozzi, F. / Dikiy, A. / Eltis, L.D. / Luchinat, C.
#2: Journal: Biochemistry / Year: 1995
Title: The Three-Dimensional Solution Structure of the Reduced High-Potential Iron-Sulfur Protein from Chromatium Vinosum Through NMR
Authors: Banci, L. / Bertini, I. / Dikiy, A. / Kastrau, D.H. / Luchinat, C. / Sompornpisut, P.
History
DepositionJan 7, 1996Processing site: BNL
Revision 1.0Jun 10, 1996Provider: repository / Type: Initial release
Revision 1.1Mar 24, 2008Group: Version format compliance
Revision 1.2Jul 13, 2011Group: Version format compliance
Revision 1.3Nov 3, 2021Group: Data collection / Database references ...Data collection / Database references / Derived calculations / Other
Category: database_2 / pdbx_database_status ...database_2 / pdbx_database_status / pdbx_nmr_software / pdbx_struct_assembly / pdbx_struct_oper_list / struct_conn / struct_ref_seq_dif / struct_site
Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession ..._database_2.pdbx_DOI / _database_2.pdbx_database_accession / _pdbx_database_status.process_site / _pdbx_nmr_software.name / _struct_conn.ptnr1_auth_comp_id / _struct_conn.ptnr1_auth_seq_id / _struct_conn.ptnr1_label_asym_id / _struct_conn.ptnr1_label_atom_id / _struct_conn.ptnr1_label_comp_id / _struct_conn.ptnr1_label_seq_id / _struct_conn.ptnr2_auth_comp_id / _struct_conn.ptnr2_auth_seq_id / _struct_conn.ptnr2_label_asym_id / _struct_conn.ptnr2_label_atom_id / _struct_conn.ptnr2_label_comp_id / _struct_conn.ptnr2_label_seq_id / _struct_ref_seq_dif.details / _struct_site.pdbx_auth_asym_id / _struct_site.pdbx_auth_comp_id / _struct_site.pdbx_auth_seq_id
Revision 1.4May 22, 2024Group: Data collection / Category: chem_comp_atom / chem_comp_bond

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Assembly

Deposited unit
A: HIGH POTENTIAL IRON SULFUR PROTEIN
hetero molecules


Theoretical massNumber of molelcules
Total (without water)9,3202
Polymers8,9681
Non-polymers3521
Water00
1


  • Idetical with deposited unit
  • defined by author
TypeNameSymmetry operationNumber
identity operation1_5551
NMR ensembles
DataCriteria
Number of conformers (submitted / calculated)15 / -
Representative

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Components

#1: Protein HIGH POTENTIAL IRON SULFUR PROTEIN / HIPIP


Mass: 8967.939 Da / Num. of mol.: 1 / Mutation: C77S
Source method: isolated from a genetically manipulated source
Details: REDUCED / Source: (gene. exp.) Allochromatium vinosum (bacteria) / Gene: POTENTIAL / References: UniProt: P00260
#2: Chemical ChemComp-SF4 / IRON/SULFUR CLUSTER


Mass: 351.640 Da / Num. of mol.: 1 / Source method: obtained synthetically / Formula: Fe4S4

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Experimental details

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Experiment

ExperimentMethod: SOLUTION NMR

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Sample preparation

Crystal grow
*PLUS
Method: other / Details: NMR

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Processing

SoftwareName: AMBER / Classification: refinement
NMR software
NameVersionDeveloperClassification
DIANAGUNTERT,BRAUN,WUTHRICHrefinement
Amber4PEARLMAN,CASE,CALDWELL,SIEBEL,SINGH,WEINER,KOLLMANrefinement
NMR ensembleConformers submitted total number: 15

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