[English] 日本語
![](img/lk-miru.gif)
- PDB-1e8u: Structure of the multifunctional paramyxovirus hemagglutinin-neur... -
+
Open data
-
Basic information
Entry | Database: PDB / ID: 1e8u | ||||||
---|---|---|---|---|---|---|---|
Title | Structure of the multifunctional paramyxovirus hemagglutinin-neuraminidase | ||||||
![]() | HEMAGGLUTININ-NEURAMINIDASE | ||||||
![]() | HYDROLASE / SIALIDASE / NEURAMINIDASE / HEMAGGLUTININ | ||||||
Function / homology | ![]() exo-alpha-(2->3)-sialidase activity / exo-alpha-(2->6)-sialidase activity / exo-alpha-(2->8)-sialidase activity / exo-alpha-sialidase / host cell surface receptor binding / symbiont entry into host cell / viral envelope / virion attachment to host cell / host cell plasma membrane / virion membrane / membrane Similarity search - Function | ||||||
Biological species | ![]() | ||||||
Method | ![]() ![]() ![]() | ||||||
![]() | Crennell, S. / Takimoto, T. / Portner, A. / Taylor, G. | ||||||
![]() | ![]() Title: Crystal Structure of the Multifunctional Paramyxovirus Hemagglutinin-Neuraminidase Authors: Crennell, S. / Takimoto, T. / Portner, A. / Taylor, G. #1: Journal: Virology / Year: 2000 Title: Crystallization of Newcastle Disease Virus Hemagglutinin-Neuraminidase Glycoprotein Authors: Takimoto, T. / Taylor, G.L. / Crennell, S.J. / Scroggs, R.A. / Portner, A. | ||||||
History |
|
-
Structure visualization
Structure viewer | Molecule: ![]() ![]() |
---|
-
Downloads & links
-
Download
PDBx/mmCIF format | ![]() | 187.8 KB | Display | ![]() |
---|---|---|---|---|
PDB format | ![]() | 152.7 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 528.3 KB | Display | ![]() |
---|---|---|---|---|
Full document | ![]() | 543.9 KB | Display | |
Data in XML | ![]() | 20.8 KB | Display | |
Data in CIF | ![]() | 33 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
-
Links
-
Assembly
Deposited unit | ![]()
| ||||||||
---|---|---|---|---|---|---|---|---|---|
1 |
| ||||||||
Unit cell |
| ||||||||
Noncrystallographic symmetry (NCS) | NCS oper: (Code: given Matrix: (-0.9883, 0.1436, -0.052), Vector: |
-
Components
#1: Protein | Mass: 49856.910 Da / Num. of mol.: 2 / Fragment: HEAD DOMAIN, RESIDUES 124-577 / Source method: isolated from a natural source / Source: (natural) ![]() #2: Chemical | #3: Sugar | #4: Sugar | ChemComp-NAG / #5: Water | ChemComp-HOH / | |
---|
-Experimental details
-Experiment
Experiment | Method: ![]() |
---|
-
Sample preparation
Crystal | Density Matthews: 2.85 Å3/Da / Density % sol: 56.91 % |
---|---|
Crystal grow | pH: 4.6 / Details: pH 4.60 |
-Data collection
Diffraction | Mean temperature: 100 K |
---|---|
Diffraction source | Source: ![]() ![]() ![]() |
Detector | Detector: IMAGE PLATE |
Radiation | Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Wavelength: 0.934 Å / Relative weight: 1 |
Reflection | Resolution: 2→30 Å / Num. obs: 75784 / % possible obs: 97 % / Redundancy: 3.7 % / Rmerge(I) obs: 0.071 / Rsym value: 0.071 |
Reflection | *PLUS Num. measured all: 282836 |
Reflection shell | *PLUS % possible obs: 98 % / Rmerge(I) obs: 0.258 |
-
Processing
Software | Name: CNS / Classification: refinement | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Refinement | Method to determine structure: ![]()
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement step | Cycle: LAST / Resolution: 2→6 Å
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refine LS restraints |
|