+Open data
-Basic information
Entry | Database: PDB / ID: 1cz6 | ||||||
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Title | SOLUTION STRUCTURE OF ANDROCTONIN | ||||||
Components | PROTEIN (ANDROCTONIN) | ||||||
Keywords | TOXIN / BETA SHEET | ||||||
Function / homology | defense response to fungus / killing of cells of another organism / defense response to bacterium / extracellular region / Androctonin Function and homology information | ||||||
Biological species | Androctonus australis (Sahara scorpion) | ||||||
Method | SOLUTION NMR | ||||||
Authors | Mandard, N. / Vovelle, F. | ||||||
Citation | Journal: J.Biomol.Struct.Dyn. / Year: 1999 Title: Androctonin, a novel antimicrobial peptide from scorpion Androctonus australis: solution structure and molecular dynamics simulations in the presence of a lipid monolayer. Authors: Mandard, N. / Sy, D. / Maufrais, C. / Bonmatin, J.M. / Bulet, P. / Hetru, C. / Vovelle, F. #1: Journal: J.Biol.Chem. / Year: 1996 Title: Characterization of novel cystein-rich antimicrobial peptides from scorpion blood Authors: Ehret-Sabatier, L. / Bulet, P. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1cz6.cif.gz | 173.1 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1cz6.ent.gz | 149.2 KB | Display | PDB format |
PDBx/mmJSON format | 1cz6.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 1cz6_validation.pdf.gz | 355.1 KB | Display | wwPDB validaton report |
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Full document | 1cz6_full_validation.pdf.gz | 487.7 KB | Display | |
Data in XML | 1cz6_validation.xml.gz | 12 KB | Display | |
Data in CIF | 1cz6_validation.cif.gz | 18.8 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/cz/1cz6 ftp://data.pdbj.org/pub/pdb/validation_reports/cz/1cz6 | HTTPS FTP |
-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein/peptide | Mass: 3088.708 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Details: ANDROCTONUS / Source: (natural) Androctonus australis (Sahara scorpion) / References: UniProt: P56684 |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||
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NMR experiment |
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-Sample preparation
Details | Contents: 3.25 MM |
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Sample conditions | pH: 4.0 / Pressure: AMBIENT / Temperature: 285 K |
-NMR measurement
NMR spectrometer | Type: Bruker AMX / Manufacturer: Bruker / Model: AMX / Field strength: 500 MHz |
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-Processing
NMR software |
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NMR ensemble | Conformer selection criteria: STRUCTURES WITH ACCEPTABLE COVALENT GEOMETRY,STRUCTURES WITH THE LOWEST ENERGY, TARGET FUNCTION Conformers calculated total number: 200 / Conformers submitted total number: 20 |