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Open data
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Basic information
Entry | Database: PDB / ID: 1bwm | ||||||
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Title | A SINGLE-CHAIN T CELL RECEPTOR | ||||||
![]() | PROTEIN (ALPHA-BETA T CELL RECEPTOR (TCR) (D10)) | ||||||
![]() | IMMUNE SYSTEM / IMMUNOGLOBULIN / IMMUNORECEPTOR | ||||||
Function / homology | ![]() Immunoglobulin V-Type / Immunoglobulin V-set domain / Immunoglobulin V-set domain / Ig-like domain profile. / Immunoglobulin-like domain / Immunoglobulin-like domain superfamily / Immunoglobulins / Immunoglobulin-like fold / Immunoglobulin-like / Sandwich / Mainly Beta Similarity search - Domain/homology | ||||||
Biological species | ![]() ![]() | ||||||
Method | SOLUTION NMR / molecular dynamics | ||||||
![]() | Hare, B.J. / Wyss, D.F. / Reinherz, E.L. / Wagner, G. | ||||||
![]() | ![]() Title: Structure, specificity and CDR mobility of a class II restricted single-chain T-cell receptor. Authors: Hare, B.J. / Wyss, D.F. / Osburne, M.S. / Kern, P.S. / Reinherz, E.L. / Wagner, G. #1: ![]() Title: Application of Automated NOE Assignment to Three-dimensional Structure Refinement of a 28 kD Single-chain T Cell Receptor Authors: Hare, B.J. / Wagner, G. | ||||||
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 1.1 MB | Display | ![]() |
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PDB format | ![]() | 910.3 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 351 KB | Display | ![]() |
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Full document | ![]() | 544.2 KB | Display | |
Data in XML | ![]() | 84.3 KB | Display | |
Data in CIF | ![]() | 109.3 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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NMR ensembles |
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Components
#1: Protein | Mass: 26970.664 Da / Num. of mol.: 1 / Fragment: VARIABLE DOMAINS FROM ALPHA AND BETA CHAINS / Mutation: C415S Source method: isolated from a genetically manipulated source Details: 27-RESIDUE HYDROPHILIC LINKER CONNECTS C TERMINUS OF BETA DOMAIN WITH N TERMINUS OF ALPHA DOMAIN Source: (gene. exp.) ![]() ![]() Cellular location (production host): CYTOPLASMIC INCLUSION BODIES Production host: ![]() ![]() References: GenBank: U83243, GenBank: U83242, UniProt: Q5R1G1*PLUS |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||||||||||
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NMR experiment |
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NMR details | Text: THE STRUCTURE WAS DETERMINED USING TRIPLE RESONANCE NMR SPECTROSCOPY ON UNIFORM 13C, 15N, AND FRACTIONALLY 2H-LABELED SINGLE-CHAIN TCR |
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Sample preparation
Sample conditions | Ionic strength: 20 mM SODIUM ACETATE / pH: 5.0 / Pressure: 1 atm / Temperature: 298 K |
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Crystal grow | *PLUS Method: other / Details: NMR |
-NMR measurement
NMR spectrometer |
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Processing
NMR software |
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Refinement | Method: molecular dynamics / Software ordinal: 1 | ||||||||||||
NMR ensemble | Conformer selection criteria: NO NOE DISTANCE VIOLATION GREATER THAN 0.5 A, NO DIHEDRAL VIOLATION GREATER THAN 5 DEGREES Conformers calculated total number: 80 / Conformers submitted total number: 15 |