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- PDB-1bnb: SOLUTION STRUCTURE OF BOVINE NEUTROPHIL BETA-DEFENSIN 12: THE PEP... -

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Entry
Database: PDB / ID: 1bnb
TitleSOLUTION STRUCTURE OF BOVINE NEUTROPHIL BETA-DEFENSIN 12: THE PEPTIDE FOLD OF THE BETA-DEFENSINS IS IDENTICAL TO THAT OF THE CLASSICAL DEFENSINS
ComponentsBOVINE NEUTROPHIL BETA-DEFENSIN 12
KeywordsBETA-DEFENSIN 12
Function / homology
Function and homology information


CCR6 chemokine receptor binding / specific granule / chemoattractant activity / cell chemotaxis / defense response to bacterium / extracellular space
Similarity search - Function
Beta defensin type / Beta defensin / Beta/alpha-defensin, C-terminal / Defensin/corticostatin family
Similarity search - Domain/homology
Biological speciesBos taurus (domestic cattle)
MethodSOLUTION NMR
AuthorsZimmermann, G.R. / Legault, P. / Selsted, M.E. / Pardi, A.
Citation
Journal: Biochemistry / Year: 1995
Title: Solution structure of bovine neutrophil beta-defensin-12: the peptide fold of the beta-defensins is identical to that of the classical defensins.
Authors: Zimmermann, G.R. / Legault, P. / Selsted, M.E. / Pardi, A.
#1: Journal: J.Biol.Chem. / Year: 1993
Title: Purification, Primary Structures, and Antibacterial Activities of Beta-Defensins, a New Family of Anti-Microbial Peptides from Bovine Neutrophils
Authors: Selsted, M.E. / Tang, Y.-Q. / Morris, W.L. / Mcguire, P.A. / Novotny, M.J. / Henschen, A.H. / Cullor, J.S.
#2: Journal: J.Biol.Chem. / Year: 1993
Title: Characterization of the Disulfide Motif in Bndb-12, an Antimicrobial Beta-Defensin Peptide from Bovine Neutrophils
Authors: Tang, Y.-Q. / Selsted, M.E.
History
DepositionMar 8, 1995Processing site: BNL
Revision 1.0Oct 15, 1995Provider: repository / Type: Initial release
Revision 1.1Mar 24, 2008Group: Version format compliance
Revision 1.2Jul 13, 2011Group: Version format compliance
Revision 1.3Feb 16, 2022Group: Database references / Derived calculations / Other
Category: database_2 / pdbx_database_status ...database_2 / pdbx_database_status / pdbx_struct_assembly / pdbx_struct_oper_list
Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _pdbx_database_status.process_site
Revision 1.4Oct 23, 2024Group: Data collection / Structure summary
Category: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / pdbx_entry_details / pdbx_modification_feature

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Structure viewerMolecule:
MolmilJmol/JSmol

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Assembly

Deposited unit
A: BOVINE NEUTROPHIL BETA-DEFENSIN 12


Theoretical massNumber of molelcules
Total (without water)4,1261
Polymers4,1261
Non-polymers00
Water00
1


  • Idetical with deposited unit
  • defined by author
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Atom site foot note1: CIS PROLINE - PRO 20
NMR ensembles
DataCriteria
Number of conformers (submitted / calculated)20 / -
Representative

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Components

#1: Protein/peptide BOVINE NEUTROPHIL BETA-DEFENSIN 12


Mass: 4126.025 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Bos taurus (domestic cattle) / Cell: POLYMORPHONUCLEOCYTE / Organ: NEUTROPHILS / References: UniProt: P46170
Has protein modificationY

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Experimental details

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Experiment

ExperimentMethod: SOLUTION NMR

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Sample preparation

Crystal grow
*PLUS
Method: other / Details: NMR

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Processing

NMR ensembleConformers submitted total number: 20

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