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Yorodumi- PDB-1bjm: LOC NAKS, A LAMBDA 1 TYPE LIGHT-CHAIN DIMER (BENCE-JONES PROTEIN)... -
+Open data
-Basic information
Entry | Database: PDB / ID: 1bjm | |||||||||
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Title | LOC NAKS, A LAMBDA 1 TYPE LIGHT-CHAIN DIMER (BENCE-JONES PROTEIN) CRYSTALLIZED IN NAKSO4 | |||||||||
Components | LOC - LAMBDA 1 TYPE LIGHT-CHAIN DIMER | |||||||||
Keywords | IMMUNOGLOBULIN / BENCE JONES / ANTIBODY / MULTIPLE QUATERNARY STRUCTURES | |||||||||
Function / homology | Immunoglobulins / Immunoglobulin-like / Sandwich / Mainly Beta / : Function and homology information | |||||||||
Biological species | Homo sapiens (human) | |||||||||
Method | X-RAY DIFFRACTION / Resolution: 2.2 Å | |||||||||
Authors | Schiffer, M. / Huang, D.B. | |||||||||
Citation | Journal: Proc.Natl.Acad.Sci.USA / Year: 1996 Title: Three quaternary structures for a single protein. Authors: Huang, D.B. / Ainsworth, C.F. / Stevens, F.J. / Schiffer, M. #1: Journal: Biochemistry / Year: 1985 Title: Novel Arrangement of Immunoglobulin Variable Domains: X-Ray Crystallographic Analysis of the Lambda-Chain Dimer Bence-Jones Protein Loc Authors: Chang, C.-H. / Short, M.T. / Westholm, F.A. / Stevens, F.J. / Wang, B.-C. / Furey Junior, W. / Solomon, A. / Schiffer, M. | |||||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1bjm.cif.gz | 94.3 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1bjm.ent.gz | 76.4 KB | Display | PDB format |
PDBx/mmJSON format | 1bjm.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 1bjm_validation.pdf.gz | 429.2 KB | Display | wwPDB validaton report |
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Full document | 1bjm_full_validation.pdf.gz | 468 KB | Display | |
Data in XML | 1bjm_validation.xml.gz | 26.6 KB | Display | |
Data in CIF | 1bjm_validation.cif.gz | 36.8 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/bj/1bjm ftp://data.pdbj.org/pub/pdb/validation_reports/bj/1bjm | HTTPS FTP |
-Related structure data
-Links
-Assembly
Deposited unit |
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1 |
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Unit cell |
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Atom site foot note | 1: CIS PROLINE - PRO A 145 / 2: CIS PROLINE - PRO B 145 |
-Components
#1: Antibody | Mass: 22769.982 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Details: CRYSTALLIZED IN NA/K SO4 / Source: (natural) Homo sapiens (human) / References: PIR: S25754 #2: Water | ChemComp-HOH / | |
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-Experimental details
-Experiment
Experiment | Method: X-RAY DIFFRACTION |
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-Sample preparation
Crystal | Density Matthews: 2.12 Å3/Da / Density % sol: 42.09 % | ||||||||||||||||||||||||
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Crystal grow | *PLUS pH: 8 / Method: unknown | ||||||||||||||||||||||||
Components of the solutions | *PLUS
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-Data collection
Radiation | Scattering type: x-ray |
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Radiation wavelength | Relative weight: 1 |
Reflection | Resolution: 2.2→25.6 Å / Num. obs: 18459 |
-Processing
Software |
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Refinement | Resolution: 2.2→10 Å / σ(F): 3 /
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Refinement step | Cycle: LAST / Resolution: 2.2→10 Å
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Refine LS restraints |
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