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Yorodumi- PDB-1abv: N-TERMINAL DOMAIN OF THE DELTA SUBUNIT OF THE F1F0-ATP SYNTHASE F... -
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-Basic information
Entry | Database: PDB / ID: 1abv | ||||||
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Title | N-TERMINAL DOMAIN OF THE DELTA SUBUNIT OF THE F1F0-ATP SYNTHASE FROM ESCHERICHIA COLI, NMR, MINIMIZED AVERAGE STRUCTURE | ||||||
Components | DELTA SUBUNIT OF THE F1F0-ATP SYNTHASE | ||||||
Keywords | ATP SYNTHESIS / ATP SYNTHASE / F1-ATPASE / DELTA SUBUNIT / NMR SPECTROSCOPY | ||||||
Function / homology | Function and homology information proton-transporting ATP synthase complex / proton motive force-driven plasma membrane ATP synthesis / proton motive force-driven ATP synthesis / proton-transporting ATP synthase complex, catalytic core F(1) / proton-transporting ATPase activity, rotational mechanism / proton-transporting ATP synthase activity, rotational mechanism / plasma membrane Similarity search - Function | ||||||
Biological species | Escherichia coli (E. coli) | ||||||
Method | SOLUTION NMR / DG, SA, MD | ||||||
Authors | Wilkens, S. / Dunn, S.D. / Chandler, J. / Dahlquist, F.W. / Capaldi, R.A. | ||||||
Citation | Journal: Nat.Struct.Biol. / Year: 1997 Title: Solution structure of the N-terminal domain of the delta subunit of the E. coli ATPsynthase. Authors: Wilkens, S. / Dunn, S.D. / Chandler, J. / Dahlquist, F.W. / Capaldi, R.A. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1abv.cif.gz | 42.4 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1abv.ent.gz | 34 KB | Display | PDB format |
PDBx/mmJSON format | 1abv.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/ab/1abv ftp://data.pdbj.org/pub/pdb/validation_reports/ab/1abv | HTTPS FTP |
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-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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NMR ensembles |
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-Components
#1: Protein | Mass: 14676.533 Da / Num. of mol.: 1 / Fragment: N-TERMINAL DOMAIN, RESIDUES 1 - 134 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Escherichia coli (E. coli) / Plasmid: PJC1 / Gene (production host): UNCH / Production host: Escherichia coli (E. coli) / Strain (production host): MM294 AND 594 / References: UniProt: P0ABA4, EC: 3.6.1.34 |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||||||
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NMR experiment |
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-Sample preparation
Sample conditions | pH: 7.2 / Temperature: 293 K |
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Crystal grow | *PLUS Method: other / Details: NMR |
-NMR measurement
NMR spectrometer |
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-Processing
Software |
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NMR software |
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Refinement | Method: DG, SA, MD / Software ordinal: 1 Details: REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE. THIS ENTRY CONTAINS THE MINIMIZED AVERAGE OVER 30 FILES. THE AVERAGE RMS DIFFERENCE TO THE MEAN STRUCTURE FOR NON-HYDROGEN ATOMS ...Details: REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE. THIS ENTRY CONTAINS THE MINIMIZED AVERAGE OVER 30 FILES. THE AVERAGE RMS DIFFERENCE TO THE MEAN STRUCTURE FOR NON-HYDROGEN ATOMS IS 1.25067. THE AVERAGE RMS DIFFERENCE TO THE MEAN STRUCTURE FOR THE BACKBONE IS 0.795004. THE B VALUE FIELD (COLUMNS 61 =66) CONTAINS THE RMS DIFFERENCE FROM THE MEAN. | ||||||||||||
NMR ensemble | Conformer selection criteria: ALL / Conformers calculated total number: 30 / Conformers submitted total number: 1 |