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- EMDB-35281: Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal ... -

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Basic information

Entry
Database: EMDB / ID: EMD-35281
TitleCryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State 5S RNP
Map datalocal resolution filtered map
Sample
  • Complex: pre-60S ribosome
    • Complex: ribosome
      • RNA: x 3 types
      • Protein or peptide: x 45 types
  • Ligand: x 1 types
KeywordsRibosome / Ribosome biogenesis / pre-60S ribosome
Function / homology
Function and homology information


dolichyl-diphosphooligosaccharide-protein glycotransferase / dolichyl-diphosphooligosaccharide-protein glycotransferase activity / RNA methyltransferase activity / intracellular mRNA localization / RNA methylation / rRNA primary transcript binding / S-adenosylmethionine-dependent methyltransferase activity / maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / preribosome, small subunit precursor / ribosomal large subunit binding ...dolichyl-diphosphooligosaccharide-protein glycotransferase / dolichyl-diphosphooligosaccharide-protein glycotransferase activity / RNA methyltransferase activity / intracellular mRNA localization / RNA methylation / rRNA primary transcript binding / S-adenosylmethionine-dependent methyltransferase activity / maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / preribosome, small subunit precursor / ribosomal large subunit binding / protein glycosylation / preribosome, large subunit precursor / mRNA transport / ribonucleoprotein complex binding / ribosomal subunit export from nucleus / RNA processing / maturation of LSU-rRNA / translation initiation factor activity / maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / ribosome assembly / ribosomal large subunit biogenesis / cytosolic ribosome assembly / rRNA processing / ribosomal small subunit biogenesis / large ribosomal subunit / ribosome biogenesis / 5S rRNA binding / ribosomal large subunit assembly / cytoplasmic translation / cytosolic large ribosomal subunit / RNA helicase activity / negative regulation of translation / rRNA binding / RNA helicase / ribosome / structural constituent of ribosome / ribonucleoprotein complex / translation / mRNA binding / GTP binding / nucleolus / ATP hydrolysis activity / DNA binding / RNA binding / nucleoplasm / ATP binding / membrane / nucleus / metal ion binding / cytoplasm
Similarity search - Function
Ribosomal RNA-processing protein 14, N-terminal / 60S ribosome biogenesis protein Rrp14 / Ribosomal RNA-processing protein 15 / Protein Peter Pan-like / Rrp15p / Surfeit locus 6 / Ribosomal RNA-processing protein 14/surfeit locus protein 6, C-terminal domain / Surfeit locus protein 6 / 60S ribosomal subunit assembly/export protein Loc1 / Methyltr_RsmF/B-like, ferredoxin-like domain ...Ribosomal RNA-processing protein 14, N-terminal / 60S ribosome biogenesis protein Rrp14 / Ribosomal RNA-processing protein 15 / Protein Peter Pan-like / Rrp15p / Surfeit locus 6 / Ribosomal RNA-processing protein 14/surfeit locus protein 6, C-terminal domain / Surfeit locus protein 6 / 60S ribosomal subunit assembly/export protein Loc1 / Methyltr_RsmF/B-like, ferredoxin-like domain / Centromere-binding protein ParB, C-terminal / Centromere-binding protein ParB C-terminal / Ribosome biogenesis factor, NIP7 / RNA (C5-cytosine) methyltransferase, NOP2 / UPF0113, pre-PUA domain / UPF0113 Pre-PUA domain / Ribosomal RNA processing protein 1-like / UPF0113 PUA domain / Nucleolar protein,Nop52 / UPF0113, PUA domain / Ribosome biogenesis protein Rpf2 / Mak16 protein / Nop2p / Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site / Mak16 protein C-terminal region / NOL1/NOP2/sun family signature. / : / STT3/PglB/AglB core domain / Ribosomal biogenesis regulatory protein / Ribosome biogenesis regulatory protein (RRS1) / Eukaryotic rRNA processing / Eukaryotic rRNA processing protein EBP2 / Ribosome biogenesis protein BRX1 / DDX18/Has1, DEAD-box helicase domain / Ribosome biogenesis protein Nop16 / Ribosome biogenesis protein Nop16 / : / Oligosaccharyl transferase, STT3 subunit / Domain of unknown function DUF4217 / Oligosaccharyl transferase STT3, N-terminal / Domain of unknown function (DUF4217) / DUF4217 / BOP1, N-terminal domain / WD repeat BOP1/Erb1 / BOP1NT (NUC169) domain / BOP1NT (NUC169) domain / SAM-dependent methyltransferase RsmB/NOP2-type / RNA (C5-cytosine) methyltransferase / : / 16S rRNA methyltransferase RsmB/F / SAM-dependent MTase RsmB/NOP-type domain profile. / Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase / PUA domain / U3 snoRNP protein/Ribosome production factor 1 / PUA domain superfamily / PUA domain profile. / Pescadillo / Pescadillo N-terminus / NOG, C-terminal / Nucleolar GTP-binding protein 1 / NOGCT (NUC087) domain / Nucleolar GTP-binding protein 1, Rossman-fold domain / NOG1, N-terminal helical domain / Nucleolar GTP-binding protein 1 (NOG1) / NOG1 N-terminal helical domain / Brix domain / Brix domain / Brix domain profile. / Brix / OBG-type guanine nucleotide-binding (G) domain / OBG-type guanine nucleotide-binding (G) domain profile. / Translation initiation factor IF6 / eIF-6 family / translation initiation factor 6 / DEAD-box subfamily ATP-dependent helicases signature. / RNA helicase, DEAD-box type, Q motif / ATP-dependent RNA helicase DEAD-box, conserved site / DEAD-box RNA helicase Q motif profile. / GTP binding domain / BRCA1 C Terminus (BRCT) domain / PUA-like superfamily / Ribosomal protein L18/L18-A/B/e, conserved site / Ribosomal protein L18e signature. / Ribosomal L28e/Mak16 / Ribosomal L28e protein family / Ribosomal protein L18e / Ribosomal protein 60S L18 and 50S L18e / metallochaperone-like domain / TRASH domain / Ribosomal protein L1, conserved site / Ribosomal protein L1 signature. / Ribosomal protein L1 / Ribosomal protein L13e, conserved site / Ribosomal protein L13e signature. / Ribosomal protein L13e / Ribosomal protein L13e / 60S ribosomal protein L18a/ L20, eukaryotes / Ribosomal protein L1, 3-layer alpha/beta-sandwich / Ribosomal protein L5 eukaryotic, C-terminal / Ribosomal L18 C-terminal region
Similarity search - Domain/homology
60S ribosomal protein L3-like protein / Brix domain-containing protein / 60S ribosomal protein L26-like protein / ATP-dependent RNA helicase / Ribosomal protein L15 / 60S ribosomal protein L6 / dolichyl-diphosphooligosaccharide--protein glycotransferase / 60S ribosomal protein l21-like protein / Ribosomal protein L37 / Putative RNA-binding protein ...60S ribosomal protein L3-like protein / Brix domain-containing protein / 60S ribosomal protein L26-like protein / ATP-dependent RNA helicase / Ribosomal protein L15 / 60S ribosomal protein L6 / dolichyl-diphosphooligosaccharide--protein glycotransferase / 60S ribosomal protein l21-like protein / Ribosomal protein L37 / Putative RNA-binding protein / Putative plasmid related protein / Uncharacterized protein / 60S ribosome subunit biogenesis protein NIP7 / Ribosome biogenesis protein RLP24 / Ribosomal RNA-processing protein 1 / Brix domain-containing protein / Ribosomal protein / Ribosomal RNA-processing protein 15 / Eukaryotic translation initiation factor 6 / 60S ribosomal protein L32-like protein / Brix domain-containing protein / Uncharacterized protein / Nucleolar protein 16 / Nucleolar GTP-binding protein 1 / 60S ribosomal protein L13 / Ribosomal protein L18-like protein / 60S ribosomal protein L8 / 60S ribosomal protein L36 / 60S ribosomal protein L20 / Ribosome biogenesis regulatory protein / Ribosome biogenesis protein ERB1 / 60S ribosomal protein l33-like protein / 60S ribosomal protein l5-like protein / Ribosome production factor 2 homolog / 60S ribosomal protein L4-like protein / Protein MAK16 / 60S ribosomal protein l7-like protein / rRNA processing protein / 60S ribosomal subunit-like protein / 60S ribosomal protein l17-like protein / 60S ribosomal protein L16-like protein / RNA methyltransferase nop2-like protein / Putative ribosomal protein / Pescadillo homolog / 60S ribosomal protein l23-like protein
Similarity search - Component
Biological speciesChaetomium thermophilum (fungus)
Methodsingle particle reconstruction / cryo EM / Resolution: 3.1 Å
AuthorsLau B / Huang Z / Beckmann R / Hurt E / Cheng J
Funding support1 items
OrganizationGrant numberCountry
Not funded
CitationJournal: EMBO Rep / Year: 2023
Title: Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
Authors: Benjamin Lau / Zixuan Huang / Nikola Kellner / Shuangshuang Niu / Otto Berninghausen / Roland Beckmann / Ed Hurt / Jingdong Cheng /
Abstract: Ribosome biogenesis proceeds along a multifaceted pathway from the nucleolus to the cytoplasm that is extensively coupled to several quality control mechanisms. However, the mode by which 5S ...Ribosome biogenesis proceeds along a multifaceted pathway from the nucleolus to the cytoplasm that is extensively coupled to several quality control mechanisms. However, the mode by which 5S ribosomal RNA is incorporated into the developing pre-60S ribosome, which in humans links ribosome biogenesis to cell proliferation by surveillance by factors such as p53-MDM2, is poorly understood. Here, we report nine nucleolar pre-60S cryo-EM structures from Chaetomium thermophilum, one of which clarifies the mechanism of 5S RNP incorporation into the early pre-60S. Successive assembly states then represent how helicases Dbp10 and Spb4, and the Pumilio domain factor Puf6 act in series to surveil the gradual folding of the nearby 25S rRNA domain IV. Finally, the methyltransferase Spb1 methylates a universally conserved guanine nucleotide in the A-loop of the peptidyl transferase center, thereby licensing further maturation. Our findings provide insight into the hierarchical action of helicases in safeguarding rRNA tertiary structure folding and coupling to surveillance mechanisms that culminate in local RNA modification.
History
DepositionFeb 7, 2023-
Header (metadata) releaseMay 17, 2023-
Map releaseMay 17, 2023-
UpdateJul 19, 2023-
Current statusJul 19, 2023Processing site: PDBc / Status: Released

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Structure visualization

Supplemental images

emd_35281.png

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Map

FileDownload / File: emd_35281.map.gz / Format: CCP4 / Size: 282.6 MB / Type: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
Annotationlocal resolution filtered map
Projections & slices

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AxesZ (Sec.)Y (Row.)X (Col.)
1.05 Å/pix.
x 420 pix.
= 438.9 Å		1.05 Å/pix.
x 420 pix.
= 438.9 Å		1.05 Å/pix.
x 420 pix.
= 438.9 Å

Surface

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Images are generated by Spider.

Voxel sizeX=Y=Z: 1.045 Å
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Contour LevelBy AUTHOR: 0.02
Minimum - Maximum-0.23660862 - 0.4907687
Average (Standard dev.)0.000065290966 (±0.008757317)
SymmetrySpace group: 1
Details

EMDB XML:

Map geometry
Axis orderXYZ
Origin000
Dimensions420420420
Spacing420420420
CellA=B=C: 438.9 Å
α=β=γ: 90.0 °

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Supplemental data

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Additional map: DeepEMhancer filtered map

Fileemd_35281_additional_1.map
AnnotationDeepEMhancer filtered map
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Additional map: without post processing

Fileemd_35281_additional_2.map
Annotationwithout post processing
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Half map: #2

Fileemd_35281_half_map_1.map
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Half map: #1

Fileemd_35281_half_map_2.map
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Sample components

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Entire : pre-60S ribosome

EntireName: pre-60S ribosome
Components
  • Complex: pre-60S ribosome
    • Complex: ribosome
      • RNA: RNA (3341-MER)
      • RNA: RNA (256-MER)
      • Protein or peptide: Brix domain-containing protein
      • Protein or peptide: Ribosome biogenesis protein C8F11.04
      • Protein or peptide: Ribosome biogenesis protein ERB1
      • Protein or peptide: RNA helicase
      • Protein or peptide: Nucleolar GTP-binding protein 1
      • Protein or peptide: Putative RNA-binding protein
      • Protein or peptide: Pescadillo homolog
      • Protein or peptide: 60S ribosomal protein l7-like protein
      • Protein or peptide: Eukaryotic translation initiation factor 6
      • Protein or peptide: Ribosome biogenesis protein RLP24
      • Protein or peptide: Nucleolar protein 16
      • Protein or peptide: rRNA-processing protein EBP2
      • Protein or peptide: Ribosomal RNA-processing protein 15
      • Protein or peptide: 60S ribosomal protein L3-like protein
      • Protein or peptide: 60S ribosomal protein L4-like protein
      • Protein or peptide: 60S ribosomal protein L6
      • Protein or peptide: 60S ribosomal protein L8
      • Protein or peptide: 60S ribosomal protein L13
      • Protein or peptide: 60S ribosomal protein L14-like protein
      • Protein or peptide: Ribosomal protein L15
      • Protein or peptide: 60S ribosomal protein L16-like protein
      • Protein or peptide: 60S ribosomal protein l17-like protein
      • Protein or peptide: Ribosomal protein L18-like protein
      • Protein or peptide: 60S ribosomal protein L20
      • Protein or peptide: 60S ribosomal protein l21-like protein
      • Protein or peptide: 60S ribosomal protein l23-like protein
      • Protein or peptide: 60S ribosomal protein L26-like protein
      • Protein or peptide: 60S ribosomal protein L32-like protein
      • Protein or peptide: 60S ribosomal protein l33-like protein
      • Protein or peptide: dolichyl-diphosphooligosaccharide--protein glycotransferase
      • Protein or peptide: 60S ribosomal protein L36
      • Protein or peptide: Ribosomal protein L37
      • Protein or peptide: Ribosomal RNA-processing protein 1
      • Protein or peptide: Brix domain-containing protein
      • Protein or peptide: Protein MAK16
      • Protein or peptide: 60S ribosome biogenesis protein Rrp14
      • Protein or peptide: Ribosome production factor 2 homolog
      • Protein or peptide: Brix domain-containing protein
      • Protein or peptide: RNA methyltransferase nop2-like protein
      • Protein or peptide: 60S ribosome subunit biogenesis protein NIP7
      • Protein or peptide: Ribosomal protein
      • Protein or peptide: Ribosome biogenesis regulatory protein
      • Protein or peptide: Putative ribosomal protein
      • Protein or peptide: 60S ribosomal protein l5-like protein
      • RNA: RNA (119-MER)
      • Protein or peptide: 60S ribosomal subunit-like protein
  • Ligand: ZINC ION

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Supramolecule #1: pre-60S ribosome

SupramoleculeName: pre-60S ribosome / type: complex / ID: 1 / Parent: 0 / Macromolecule list: #1-#48
Source (natural)Organism: Chaetomium thermophilum (fungus)

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Supramolecule #2: ribosome

SupramoleculeName: ribosome / type: complex / ID: 2 / Parent: 1 / Macromolecule list: #1-#48
Source (natural)Organism: Chaetomium thermophilum (fungus)

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Macromolecule #1: RNA (3341-MER)

MacromoleculeName: RNA (3341-MER) / type: rna / ID: 1 / Details: 25S rRNA / Number of copies: 1
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 1.080019125 MDa
SequenceString: GGUUGACCUC GGAUCAGGUA GGAGGACCCG CUGAACUUAA GCAUAUCAAU AAGCGGAGGA AAAGAAACCA ACAGGGAUUG CCCUAGUAA CGGCGAGUGA AGCGGCAACA GCUCAAAUUU GAAAGCUGGC UUCGGCCCGC GUUGUAAUUU GGAGAGGAUG C UUUGGGCG ...String:
GGUUGACCUC GGAUCAGGUA GGAGGACCCG CUGAACUUAA GCAUAUCAAU AAGCGGAGGA AAAGAAACCA ACAGGGAUUG CCCUAGUAA CGGCGAGUGA AGCGGCAACA GCUCAAAUUU GAAAGCUGGC UUCGGCCCGC GUUGUAAUUU GGAGAGGAUG C UUUGGGCG AGGCUCCUUC UGAGUUCCCU GGAACGGGAC GCCACAGAGG GUGAGAGCCC CGUAUAGUUG GAAGCCAAGC CU GUGUAAA GCUCCUUCGA CGAGUCGAGU AGUUUGGGAA UGCUGCUCAA AAUGGGAGGU AAAUUUCUUC UAAAGCUAAA UAC CGGCCA GAGACCGAUA GCGCACAAGU AGAGUGAUCG AAAGAUGAAA AGCACUUUGA AAAGAGGGUU AAAUAGCACG UGAA AUUGU UGAAAGGGAA GCGCUUGUGA CCAGACUUGC GCCCGGCGGA UCAUCCGGUG UUCUCACCGG UGCACUCCGC CGGGC UCAG GCCAGCAUCG GUUCUGGCGG GGGGAUAAAG GCCCAGGGAA UGUGGCUCCU CCGGGAGUGU UAUAGCCCUG GGUGUA AUA CCCUCGCCGG GACCGAGGAC CGCGCUCUGC AAGGAUGCUG GCGUAAUGGU CACCAGCGAC CCGUCUUGAA ACACGGA CC AAGGAGUCAA GGUUUUGCGC GAGUGUUUGG GUGUAAAACC CGCACGCGUA AUGAAAGUGA ACGUAGGUGA GAGCUUCG G CGCAUCAUCG ACCGAUCCUG AUGUAUUCGG AUGGAUUUGA GUAGGAGCGU UAAGCCUUGG ACCCGAAAGA UGGUGAACU AUGCUUGGAU AGGGUGAAGC CAGAGGAAAC UCUGGUGGAG GCUCGCAGCG GUUCUGACGU GCAAAUCGAU CGUCAAAUCU GAGCAUGGG GGCGAAAGAC UAAUCGAACC AUCUAGUAGC UGGUUACCGC CGAAGUUUCC CUCAGGAUAG CAGUGUCGAC C UUCAGUUU UAUGAGGUAA AGCGAAUGAU UAGGGACUCG GGGGCGAUUU UUAGCCUUCA UCCAUUCUCA AACUUUAAAU AU GUAAGAA GCCCUUGUUA CUUAACUGAA CGUGGGCAUU CGAAUGUAUC GACACUAGUG GGCCAUUUUU GGUAAGCAGA ACU GGCGAU GCGGGAUGAA CCGAACGCGG GGUUAAGGUG CCGGAGUGGA CGCUCAUCAG ACACCACAAA AGGCGUUAGU ACAU CUUGA CAGCAGGACG GUGGCCAUGG AAGUCGGAAU CCGCUAAGGA CUGUGUAACA ACUCACCUGC CGAAUGUACU AGCCC UGAA AAUGGAUGGC GCUCAAGCGU CCCACCCAUA CCCCGCCCUC AGGGUAGAAA CGAUGCCCUG AGGAGUAGGC GGCCGU GGA GGUCAGUGAC GAAGCCUAGG GCGUGAGCCC GGGUCGAACG GCCUCUAGUG CAGAUCUUGG UGGUAGUAGC AAAUACU UC AAUGAGAACU UGAAGGACCG AAGUGGGGAA AGGUUCCAUG UGAACAGCGG UUGGACAUGG GUUAGUCGAU CCUAAGCC A UAGGGAAGUU CCGUUUCAAA GGGGCACUCG UGCCCCGUGU GGCGAAAGGG AAGCCGGUUA AUAUUCCGGC ACCUGGAUG UGGGUUUUGC GCGGCAACGC AACUGAACGC GGAGACGACG GCGGGGGCCC CGGGCAGAGU UCUCUUUUCU UCUUAACGGU CUAUCACCC UGGAAACAGU UUGUCUGGAG AUAGGGUUUA AUGGCCGGAA GAGCCCGACA CUUCUGUCGG GUCCGGUGCG C UCUCGACG UCCCUUGAAA AUCCGCGGGA GGGAAUAAUU CUCACGCCAG GUCGUACUCA UAACCGCAGC AGGUCCCCAA GG UGAACAG CCUCUGGUUG AUAGAACAAU GUAGAUAAGG GAAGUCGGCA AAAUAGAUCC GUAACUUCGG GAAAAGGAUU GGC UCUAAG GGUUGGGCAC GUUGGGCUUU GGGCGGACGC CCUGGGAGCA GAGGGCCUCU AGCCGGGCAA CCGGCCGGCG GCCC UCAGC ACCCGGGGUU GAAGCCCUUA GCAGGCUUCG GCCGUCCGGC GUGCGGUUAA CAACCAACUU AGAACUGGUA CGGAC AGGG GGAAUCUGAC UGUCUAAUUA AAACAUAGCA UUGCGAUGGC CAGAAAGUGG UGUUGACGCA AUGUGAUUUC UGCCCA GUG CUCUGAAUGU CAAAGUGAAG AAAUUCAACC AAGCGCGGGU AAACGGCGGG AGUAACUAUG ACUCUCUUAA GGUAGCC AA AUGCCUCGUC AUCUAAUUAG UGACGCGCAU GAAUGGAUUA ACGAGAUUCC CACUGUCCCU AUCUACUAUC UAGCGAAA C CACAGCCAAG GGAACGGGCU UGGCAAAAUC AGCGGGGAAA GAAGACCCUG UUGAGCUUGA CUCUAGUUUG ACAUUGUGA AAAGACAUAG GAGGUGUAGA AUAGGUGGGA GCUUCGGCGC CAGUGAAAUA CCACUACUCC UAUUGUUUUU UUACUUAUUC AAUGAAGCG GGGCUGGACU UGCGUCCAAC UUCUGGAGUU AAGGUCCUUC GCGGGCCGAC CCGGGUUGAA GACAUUGUCA G GUGGGGAG UUUGGCUGGG GCGGCACAUC UGUUAAACCA UAACGCAGGU GUCCUAAGGG GGGCUCAUGG AGAACAGAAA UC UCCAGUA GAACAAAAGG GUAAAAGUCC CCUUGAUUUU GAUU(OMU)UCAG(OMU) G(OMU)GAAUACAA ACCAUGAAAG U GUGGCCUA UCGAUCCUUU AGUCCCUCGA AAUUUGAGGC UAGAGGUGCC AGAAAAGUUA CCACAGGGAU AACUGGCUUG UG GCGGCCA AGCGUUCAUA GCGACGUCGC UUUUUGAUCC UUCGAUGUCG GCUCUUCCUA UCAUACCGAA GCAGAAUUCG GUA AGCGUU GGAUUGUUCA CCCACUAAUA GGGAACGUGA GCUGGGUUUA GACCGUCGUG AGACAGGUUA GUUUUACCCU ACUG AUGAA CUCGUCGCAA UGGUAAUUCA GCUUAGUACG AGAGGAACCG CUGAUUCAGA UAAUUGGUUU UUGCGGUUGU CCGAC CGGG CAGUGCCGCG AAGCUACCAU CUGCUGGAUA AUGGCUGAAC GCCUCUAAGU CAGAAUCCAU GCCAGAACGC GACGAU ACU ACCCGCACGU UGUAGACGUA UAAGAAUAGG CUCCGGCCUC GUAUCCUAGC AGGCGAUUCC UCCGCCGGCC UCGAAGU GG CCGUCGGUAA UUCGCGUAUU GCAAUUUAGA CACGCGCGGG AUCAAAUCCU UUGCAGACGA CUUAGAUGUG CGAAAGGG U CCUGUAAGCA GUAGAGUAGC CUUGUUGUUA CGAUCUGCUG AGGGUAAGCC CUCCUUCGCC UAGAUUUCCC AG

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Macromolecule #2: RNA (256-MER)

MacromoleculeName: RNA (256-MER) / type: rna / ID: 2 / Details: 5.8S rRNA / Number of copies: 1
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 82.467695 KDa
SequenceString: AAACUUUCAA CAACGGAUCU CUUGGUUCUG GCAUCGAUGA AGAACGCAGC GAAAUGCGAU AAGUAAUGUG AAUUGCAGAA UUCCGUGAA UCAUCGAAUC UUUGAACGCA CAUUGCGCCC GCCGGUAUUC CGGCGGGCAU GCCUGUUCGA GCGUCAUUUC A ACCAUCAA ...String:
AAACUUUCAA CAACGGAUCU CUUGGUUCUG GCAUCGAUGA AGAACGCAGC GAAAUGCGAU AAGUAAUGUG AAUUGCAGAA UUCCGUGAA UCAUCGAAUC UUUGAACGCA CAUUGCGCCC GCCGGUAUUC CGGCGGGCAU GCCUGUUCGA GCGUCAUUUC A ACCAUCAA GCCCUGGGCU UGUGUUGGGG ACCCGCGGCU GCUCGCGGGC CCUGAAAAGC AGUGGCGGGC UCGCUGGCGG GU GCCAGCC GUAAAACCC

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Macromolecule #47: RNA (119-MER)

MacromoleculeName: RNA (119-MER) / type: rna / ID: 47 / Details: 5S rRNA / Number of copies: 1
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 38.312738 KDa
SequenceString:
ACGUACGACC AUACCCAGUG GAAAGCACGG CAUCCCGUCC GCUCUGCCCU AGUUAAGCCA CUGAGGGCCC GGUUAGUAGU UGGGUCGGU GACGACCAGC GAAUCCCGGG UGUUGUACGU

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Macromolecule #3: Brix domain-containing protein

MacromoleculeName: Brix domain-containing protein / type: protein_or_peptide / ID: 3 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 36.48202 KDa
SequenceString: MAAVYKTIAK VTGSKEDKDK EDRSNIIAER KNKQRVLVLS SRGVTYRHRH LLNDLASMLP HGRKDAKFDT KSRLYELCEL AELYNCNNV LFFEARKGKD LYMWFSKVPN GPTVKFYAQN LHTMEELHFQ GNCLKGSRPI LSFDAAFEQE PYLKVIKELF L HTFGVPQG ...String:
MAAVYKTIAK VTGSKEDKDK EDRSNIIAER KNKQRVLVLS SRGVTYRHRH LLNDLASMLP HGRKDAKFDT KSRLYELCEL AELYNCNNV LFFEARKGKD LYMWFSKVPN GPTVKFYAQN LHTMEELHFQ GNCLKGSRPI LSFDAAFEQE PYLKVIKELF L HTFGVPQG HKKSKPFIDH VLSFSVADGK IWVRNYEIRE VEKVKGEADK REEGETEKPK AAKPGSKDTD INLIEIGPRF VL TPIIIQE GSFGGPILYE NKRFISPNKI RAELRKAKAA RHHARMEQQR DLLARKRQLG LDESTPKKKD DLDTRELFA

UniProtKB: Brix domain-containing protein

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Macromolecule #4: Ribosome biogenesis protein C8F11.04

MacromoleculeName: Ribosome biogenesis protein C8F11.04 / type: protein_or_peptide / ID: 4 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 43.700527 KDa
SequenceString: MAPSTAVAKK ETDAVIPVDP DQTLKACKAL LAHIKKAAAA PRPDGKQNLL ADEESTVAET PIWLTLTTKK HIHDSHRLQP GKIILPHPL NTSEEISVCL ITADPQRFYK NAVADEFPED LRAKIGRVID ISHLKAKFKA YEAQRKLFSE HDVFLADTRI I NRLPKALG ...String:
MAPSTAVAKK ETDAVIPVDP DQTLKACKAL LAHIKKAAAA PRPDGKQNLL ADEESTVAET PIWLTLTTKK HIHDSHRLQP GKIILPHPL NTSEEISVCL ITADPQRFYK NAVADEFPED LRAKIGRVID ISHLKAKFKA YEAQRKLFSE HDVFLADTRI I NRLPKALG KTFYKTTTKR PIPVVLMAQR EKVNGKRVPA PKGKKEKRDP LENANARPIP EIVAEIRKAI GAALVHLSPS TN TAIKVGY ANWEPEKLAA NIETVIRELV ERFVPQKWQN VRNFYVKGPE TAALPIYQTD ELWLDESKVV PDGQEPARAL PGK REKANI GKKRKPLEDA SQPALEETGK DERPKKKAKK TLPESNDDKL DKAIAERKEQ LKKQKAAAKK VAADI

UniProtKB: Uncharacterized protein

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Macromolecule #5: Ribosome biogenesis protein ERB1

MacromoleculeName: Ribosome biogenesis protein ERB1 / type: protein_or_peptide / ID: 5 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 90.838023 KDa
SequenceString: MGSKIVEKKR KSRDSDSESD NELGDGLFDG VLSQSEDEED YIPSSEVDED DDDDADESAS EDSDDSNDSE DDEVEEDDEA LLSDEIPSE GESEKDQDLA ESKESKQDQD KEPSEPEILE PFVDPPRKED EELEDRNYRI EKDANGGIRY VYDEIDPVYD S DDTDYNVP ...String:
MGSKIVEKKR KSRDSDSESD NELGDGLFDG VLSQSEDEED YIPSSEVDED DDDDADESAS EDSDDSNDSE DDEVEEDDEA LLSDEIPSE GESEKDQDLA ESKESKQDQD KEPSEPEILE PFVDPPRKED EELEDRNYRI EKDANGGIRY VYDEIDPVYD S DDTDYNVP VNTIGNIPLS FYDSYPHIGY DINGKKIMRP ATGDALQNLL DSIEVPEGWT GLTDPNTGKP LNLSRDELEL IR KVQQGLI PDDVEDPYPD TVEWFTSVEE KMPLSAAPEP KRRFIPSKNE AKQIMKLVRA IREGRILPYK PPEEREREEL EKE EEFYDL WQNEEPQPPN PMHIPAPKLP PPGYDLSYNP PPEYLPTKEE REEWEKMDPE DREKDYLPTK YDSLRKVPAW GNFV KERFE RCMDLYLAPR VRKNRLNIDP NSLLPKLPSP DELKPFPTVQ QTIFRGHEGR VRSVAIDPTG VALATGGDDG TVRVW ELLT GRQVWSVKLN GDEAVNTVRW RPTKDTFILA AAAGEDIFLM IPTHPSVTPA LDQASRDILN AGFGHATNGK QQANLP PGK EPPGKWARPG TRLEDEGVLL RITVRSTIKA ISWHRRGDHF ATVSPSGQRS SVAIHTLSKH LTQIPFRKLN GLAQTAS FH PLRPLFFVAT QRSIRCYDLQ KLELVKIVQP GAKWISSFDV HPGGDNLVVG SYDKRLLWHD LDLSNRPYKT MRFHTEAI R AVRFHKGGLP LFADASDDGS LQIFHGKVPN DQLENPTIVP VKMLKGHKVV NKLGVLDIDW HPREPWCVSA GADGTARLW M

UniProtKB: Ribosome biogenesis protein ERB1

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Macromolecule #6: RNA helicase

MacromoleculeName: RNA helicase / type: protein_or_peptide / ID: 6 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 66.830867 KDa
SequenceString: MASESSKKRK FKDSKGPKPD EAVAKPSKFK KLKRDPTPEE RETSDSESGN SDGQHEPDQV DSDGEDAVSD DGSFDEKVAH QDEDGSRPE NGTDLEDVPK NDNLLPPPTN AQEFSELNLS EKTTKAIAEM GFTKMTEIQR RAIPPALAGK DVLGAAKTGS G KTLAFLIP ...String:
MASESSKKRK FKDSKGPKPD EAVAKPSKFK KLKRDPTPEE RETSDSESGN SDGQHEPDQV DSDGEDAVSD DGSFDEKVAH QDEDGSRPE NGTDLEDVPK NDNLLPPPTN AQEFSELNLS EKTTKAIAEM GFTKMTEIQR RAIPPALAGK DVLGAAKTGS G KTLAFLIP AVEMLSSLRF KPRNGTGAIV VTPTRELALQ IFGVARELMK YHSQTYGVVI GGANRRAEAE KLGKGVNLLI AT PGRLLDH LQNTPFVFKN LKSLIIDEAD RILEIGFEDE MRQIVKILPK EDRQTMLFSA TQTTKVEDLA RISLRPGPLY INV DEEKKY STVEGLEQGY VVVEADKRFL LLFSFLKKMA KKKIIVFFSS CNSVKYYSEL LQYIDLPVLD LHGKQKQQKR TNTF FEFCN AKSGTLICTD VAARGLDIPQ VDWIVQFDPP DDPRDYIHRV GRTARGNNGK GRSLLFLQPC ELGFLAHLKA AKVPV VEYD FPKNKILNVQ SQLEKLISTN YYLNQSAKEG YRSYIHAYAS HSLRSVFDVH KLDLVKVAKS FGFSTPPRVD ITLSAS LSR DKKPQGRRAY GSQPRQGGRY KKVGDIPDPQ PNTFG

UniProtKB: ATP-dependent RNA helicase

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Macromolecule #7: Nucleolar GTP-binding protein 1

MacromoleculeName: Nucleolar GTP-binding protein 1 / type: protein_or_peptide / ID: 7 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 75.621508 KDa
SequenceString: MTGWKDIPPV PTAQEFIDIV LSRTQRRLPT QIRPGFKISR IRAFYTRKVK FTQETCSEKF GAIISSFPVL SDQHPFHRDL MNILYDADH FKVALGQIST AKNLIETISR DYVRLLKYAQ SLYQCKQLKR AALGRMATLI KRLKDPLIYL DQVRQHLARL P DINPTTRT ...String:
MTGWKDIPPV PTAQEFIDIV LSRTQRRLPT QIRPGFKISR IRAFYTRKVK FTQETCSEKF GAIISSFPVL SDQHPFHRDL MNILYDADH FKVALGQIST AKNLIETISR DYVRLLKYAQ SLYQCKQLKR AALGRMATLI KRLKDPLIYL DQVRQHLARL P DINPTTRT LLVAGFPNVG KSSFVRSVTR ADTPVEPYAF TTKSLFVGHL DYKYLRYQVI DTPGILDHPL EEMNTIEMQS VT ALAHLRA AVLYFMDISE QCGFSLKAQI NLFKSIKPLF ANKMVFIVLN KMDIKKFEEL DPEMQQEIND LTKSGEVEIL RAS CATQEG VQEVKNHVCE RLLVERVSQK LKAGTHSNGN IGTRLQEVMA RIHVATPMDG TTRETFIPEA VKNLKKYDKN DPNR RVLAR DIEEANGGAG VFNVDLRKDW ILENPEWKYD KIPEIFDGKN VYDYIDPDID AKLQALEEEE ERLEKEGFYD EDDDL PDEE EEEILQKAEY IREQHALIRN EAKMRKSLKN RAIIPRKAVK KPLSQLEDHL DQLGVDTEAI GLRARAQTAQ SSRGRS LVR SRGTTADPDA MDIDDGAASA KERLARSRSR ARSVAATNRL QDGVQGTTLR SKAERQAKLA QRKMNRMARQ GEADRHI HA SMPKHLFSGK RTIGKTDRR

UniProtKB: Nucleolar GTP-binding protein 1

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Macromolecule #8: Putative RNA-binding protein

MacromoleculeName: Putative RNA-binding protein / type: protein_or_peptide / ID: 8 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 45.884414 KDa
SequenceString: MAAELRKKKS KSAVADADAA ISKKEKATKV TKATPKAEKR KAPEEASPVA IKKQKADKDA VVKKAAVAAE DKIAEKPVKS VLKKETSAK AKEAAKPKKK QEKVEEEEEE ALENADAAFG SDEESELDEQ TKALMDTLDD GEESDEDESK QVSTFKKGQD V GKIPTPKK ...String:
MAAELRKKKS KSAVADADAA ISKKEKATKV TKATPKAEKR KAPEEASPVA IKKQKADKDA VVKKAAVAAE DKIAEKPVKS VLKKETSAK AKEAAKPKKK QEKVEEEEEE ALENADAAFG SDEESELDEQ TKALMDTLDD GEESDEDESK QVSTFKKGQD V GKIPTPKK APQKQTNGDS KPAGDSQPGV MYIARLPHGF YEHELRGYFS QFGEITRLRV VRNKKTGASR HRAFIEFADA EV ADIAART MDKYLLFGHI LTCKIVPPAQ VHPDLFKGAN RRFKVVPWNK MAGRQLERPL SESQWQVKVA KEEQRRAARA EKL KEMGYE FEAPALKVPK AKPVLENGEE EKKAIETAPA PAVEEKESKE VAKRQAEEEV EEKAPAPKTK KVKEDKPAKE AATI SAPKK GKKSKKTKS

UniProtKB: Putative RNA-binding protein

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Macromolecule #9: Pescadillo homolog

MacromoleculeName: Pescadillo homolog / type: protein_or_peptide / ID: 9 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 77.16725 KDa
SequenceString: MGKAKKKGKS GAARNYMTRT QAVKKLQLSL PDFRKLCIWK GIYPREPRDR RKVNKSATAS TTFYYTKDIQ YLLHEPLLQK FREQKALEK KISRALGRGD VSNAARLERN ANLPEKTGKP RYTLNHIIRE RYPTFQDALR DLDDCLSMLF LFANLPSTTA V PAKMIARC ...String:
MGKAKKKGKS GAARNYMTRT QAVKKLQLSL PDFRKLCIWK GIYPREPRDR RKVNKSATAS TTFYYTKDIQ YLLHEPLLQK FREQKALEK KISRALGRGD VSNAARLERN ANLPEKTGKP RYTLNHIIRE RYPTFQDALR DLDDCLSMLF LFANLPSTTA V PAKMIARC ERLCHEFQHY LIVTHSLRKS FLSIKGIYYQ ANIQGEDILW LVPYKFNQRI VGDVDFRIMG TFVEFYMTLL GF VNYRLYT SIGLKYPPKF DQVKDDQGAE LAAFSLEGLN LASQNGEQKA ITNGEEHGPD PKVQAEVDKL VAKLREEEQQ ANG DKTDEK GEENEGDDKP SDAIDKFEPV APGGDVLPQP SYSSSDPSQL FANFTFFLSR ETPRQPLEFI LRAFGCKRIG WDAV LGEGA FTTDESDPRI THQIIDRPVI RAAVSEDGDG EDNQTSQKLA PNGRYPGRIY VQPQWVWDSI NDEELKPPEL YAPGA QLPP HLSPFVKPTQ GQYDPTKPLE EQQTEAEALE AELEDAQAQQ EGSDEESGSE VENDMSVASD EEDEQEDDFG GFSDED EEQ SDEGSEEGDE EEDDDEEEEA TLERQRELEA ELAGKAVSKG KPLDPKVKAK LEAKKALERK KKQEAEELER AKGMLSK KK RKLFEQMQYS NAKKNAEDAK LRAKRRRIEK EMAAKKA

UniProtKB: Pescadillo homolog

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Macromolecule #10: 60S ribosomal protein l7-like protein

MacromoleculeName: 60S ribosomal protein l7-like protein / type: protein_or_peptide / ID: 10 / Number of copies: 2 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 28.821816 KDa
SequenceString: MSSTTVPTQN DILVPETLLK KRKSQEKARA ERAAALEKRK QANKEKRQVI FKRAEKYVKE YREQEREKIR LARIAKQQGS FHIPAEAKL VFVIRIKGIN KIPPKPRKIL QLLRLRQINN GVFVKVTKAT AEMIKIVEPW VAYGYPNLKS VRELIYKRGY G KVNGQRIP ...String:
MSSTTVPTQN DILVPETLLK KRKSQEKARA ERAAALEKRK QANKEKRQVI FKRAEKYVKE YREQEREKIR LARIAKQQGS FHIPAEAKL VFVIRIKGIN KIPPKPRKIL QLLRLRQINN GVFVKVTKAT AEMIKIVEPW VAYGYPNLKS VRELIYKRGY G KVNGQRIP LTDNAIIEEN LGKYGIICIE DLIHEIFTVG PNFKQAANFL WPFKLSNPNG GFRPRKFKHF IEGGDLGNRE EH INALIRA MN

UniProtKB: 60S ribosomal protein l7-like protein

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Macromolecule #11: Eukaryotic translation initiation factor 6

MacromoleculeName: Eukaryotic translation initiation factor 6 / type: protein_or_peptide / ID: 11 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 26.46884 KDa
SequenceString: MAVRAQFENS NEVGVFATLT NSYCLVALGA SENFYSVFEA ELQDVIPICR TTIAGTRIIG RLTAGNRKGL LVPTTTTDQE LQHLRNSLP DDIRIQRIEE RLSALGNVIV CNDHTALIHP DLERETEEII ADVLGVEVFR QTIADHVLVG SYMALSNQGG L VHPKTSIQ ...String:
MAVRAQFENS NEVGVFATLT NSYCLVALGA SENFYSVFEA ELQDVIPICR TTIAGTRIIG RLTAGNRKGL LVPTTTTDQE LQHLRNSLP DDIRIQRIEE RLSALGNVIV CNDHTALIHP DLERETEEII ADVLGVEVFR QTIADHVLVG SYMALSNQGG L VHPKTSIQ DQDELSSLLG VPLVAGSVNR GSNVIGGGMV VNDWLAVTGL DTTAPELSVI ESVFRLGEGA GPGAINTSMK NT IVESFY

UniProtKB: Eukaryotic translation initiation factor 6

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Macromolecule #12: Ribosome biogenesis protein RLP24

MacromoleculeName: Ribosome biogenesis protein RLP24 / type: protein_or_peptide / ID: 12 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 26.434312 KDa
SequenceString: MRIENCFFCG RPAWPSKGIT FMRNDGKAFR FCRSKCHKNF KMKRNPRKLK WTKAYRKNAG KEMVVDSTLQ FAARRNVPVR YNRELWQKT LKAMERISEI RARRERVFYK KRMAGKRARE VAAARKLVAE NEHLLPRLRG SEKRRLAELA AERGVDVEEL E REELAKLA ...String:
MRIENCFFCG RPAWPSKGIT FMRNDGKAFR FCRSKCHKNF KMKRNPRKLK WTKAYRKNAG KEMVVDSTLQ FAARRNVPVR YNRELWQKT LKAMERISEI RARRERVFYK KRMAGKRARE VAAARKLVAE NEHLLPRLRG SEKRRLAELA AERGVDVEEL E REELAKLA SKKKSKAFGG EVRRVRVRTD GGVEEITESF GGKNVDEEMD DDDHDDSDRD DDDMDTD

UniProtKB: Ribosome biogenesis protein RLP24

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Macromolecule #13: Nucleolar protein 16

MacromoleculeName: Nucleolar protein 16 / type: protein_or_peptide / ID: 13 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 26.960477 KDa
SequenceString: MGRELQKRKR RSSRPTIRMP NRRKKALNPA GNNIIAKSWN KKETLSQNYT RFGLVAKLGK ATGGTAPGNK ALLKDLNDPL AIKSGDQGL IKVSEVKVER DEQGRIKRVV RDNNPLNDPL NDLDSDSESD AVPQQQQQEQ PVLNNHIRQH DLELENVAAD V DDESKPEV ...String:
MGRELQKRKR RSSRPTIRMP NRRKKALNPA GNNIIAKSWN KKETLSQNYT RFGLVAKLGK ATGGTAPGNK ALLKDLNDPL AIKSGDQGL IKVSEVKVER DEQGRIKRVV RDNNPLNDPL NDLDSDSESD AVPQQQQQEQ PVLNNHIRQH DLELENVAAD V DDESKPEV LRALEREATR PVEKTVRHQS EREREWLQRL VDKHGDDVAA MARDRKLNPY QQTASDIKRR LKKAGLLSA

UniProtKB: Nucleolar protein 16

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Macromolecule #14: rRNA-processing protein EBP2

MacromoleculeName: rRNA-processing protein EBP2 / type: protein_or_peptide / ID: 14 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 50.255562 KDa
SequenceString: MAKKGATQSP KAGSKPNSQT GDAQSKNQKA DRRKSNEPVV EKVAEKEEQR EEETEESEED ESEDEQLQIR ANGNNESDSE EDSDENSED EDESDDDSGD EHPTHHIDFE AIDDSDSESE LDSDEENDKK QDSNKAQNGM SEDKMDVDKD GEDKSGDEED E EEEIDVEE ...String:
MAKKGATQSP KAGSKPNSQT GDAQSKNQKA DRRKSNEPVV EKVAEKEEQR EEETEESEED ESEDEQLQIR ANGNNESDSE EDSDENSED EDESDDDSGD EHPTHHIDFE AIDDSDSESE LDSDEENDKK QDSNKAQNGM SEDKMDVDKD GEDKSGDEED E EEEIDVEE LEPEDEEDEE QIAAGTRTRQ TINNKEGLLT ALRRIQLDIN PKTTPFSFHQ SVVASKRTED SIPQIEDDLQ RE LAFMNQA LEAARLGRSL LRKEGVPFTR PTDYFAEMVR TDATMEKVKQ KLIEEATAKK AAAEARKQRD LKKFGKAVQV QKQ LERAKQ KREALDKINQ LKRKRAEGGS AALGATEADD PFDVAVDNEL SRDSKPKKRR ADGDHPVPNP KRQKKNAKYG FGGK KRGSK SGDAISSGDL SGFSVKRMKY GGGAGGGKKK ANRPGKARRK AAAAKR

UniProtKB: rRNA processing protein

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Macromolecule #15: Ribosomal RNA-processing protein 15

MacromoleculeName: Ribosomal RNA-processing protein 15 / type: protein_or_peptide / ID: 15 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 38.314246 KDa
SequenceString: MAGSVKKRSL SDGLKGRVAP PPKKQKKMEY RSSSEKSDSS SDDGGVPLPP NLLDSDDEDF DNIEVDDGAT TASSSDDDSD SDSFSESEP KPKKSAKSSK QAPKPPKKDD KNFVAKDAPS SEESDFSEYG SDHDDDSDEE GENDEYSDLS DADTHASSVA G SATSSKSG ...String:
MAGSVKKRSL SDGLKGRVAP PPKKQKKMEY RSSSEKSDSS SDDGGVPLPP NLLDSDDEDF DNIEVDDGAT TASSSDDDSD SDSFSESEP KPKKSAKSSK QAPKPPKKDD KNFVAKDAPS SEESDFSEYG SDHDDDSDEE GENDEYSDLS DADTHASSVA G SATSSKSG QHKKSKRNDP DAFAESMKKM LSSKLPASKR ADPIVARSAA AAEHARQAAD AALEAKARKR LREQKRLALE KG RVRDVLV ASTTRTFNVE TGKVEEVVDE EGVTTEQIIE RERKLRKIAQ RGVVKLFNAV RAAQLKALEA EKAARREGVI GSK QKEEKV TEMSRKGFLD LIASGGGGLK KGALEEAR

UniProtKB: Ribosomal RNA-processing protein 15

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Macromolecule #16: 60S ribosomal protein L3-like protein

MacromoleculeName: 60S ribosomal protein L3-like protein / type: protein_or_peptide / ID: 16 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 44.456855 KDa
SequenceString: MSHRKYEAPR HGSLAFLPRK RAARHRGRVK SFPKDDPKKP VHLTAAMGYK AGMTTIVRDL DRPGAKAHKK EVVEAVTIID CPPMVVVGL VGYIETPRGL RSLTTVWAEH LSDEVKRRFY KNWYKSKKKA FTKYAKKYAE NNGASITREL ERIKKYCTVV R VLAHTQIR ...String:
MSHRKYEAPR HGSLAFLPRK RAARHRGRVK SFPKDDPKKP VHLTAAMGYK AGMTTIVRDL DRPGAKAHKK EVVEAVTIID CPPMVVVGL VGYIETPRGL RSLTTVWAEH LSDEVKRRFY KNWYKSKKKA FTKYAKKYAE NNGASITREL ERIKKYCTVV R VLAHTQIR KTPLKQKKAH LMEIQINGGS VADKVEFGRS LFEKPVTIDT IFEKDEMIDV IAVTKGHGFV GVTARWGTKK LP RKTHKGL RKVACIGAWH PSHVQWTVAR AGQMGYHHRT SVNHKIYRIG KGDDEANAST ETDLTKKKIT PMGGFVRYGE VNN DYVMIK GSVPGVKKRI MTLRKSLFTH TSRKALEKVE LKWIDTSSEF GHGAFQTAAE KKQFMGTLKK DLQTSA

UniProtKB: 60S ribosomal protein L3-like protein

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Macromolecule #17: 60S ribosomal protein L4-like protein

MacromoleculeName: 60S ribosomal protein L4-like protein / type: protein_or_peptide / ID: 17 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 39.439938 KDa
SequenceString: MASRPTVTVF GADGKPTGAT EVLPKVFSAP IRPDIVKHVH TGMAKNKRQP YAVSEKAGHQ TSAESWGTGR AVARIPRVSG GGTHRAGQG AFGNMCRSGR MFAPTKIWRK WHVKINQGQK RFATASALAA SAVAPLLMAR GHQVSTVPEV PLVVDSAAVA G DAVAKTAA ...String:
MASRPTVTVF GADGKPTGAT EVLPKVFSAP IRPDIVKHVH TGMAKNKRQP YAVSEKAGHQ TSAESWGTGR AVARIPRVSG GGTHRAGQG AFGNMCRSGR MFAPTKIWRK WHVKINQGQK RFATASALAA SAVAPLLMAR GHQVSTVPEV PLVVDSAAVA G DAVAKTAA AYKLLKAIGA GPDVEKVKKS KKLRAGKGKM RGRRHRQRRG PLIVYSPEHD GKELVKGFRN IPGVETCPVD AL NLLQLAP GGHLGRFIVW TSAAIKQLDA VYESKKGFFL PANIVSQADL SRLINSTEIQ SVLRAPKGEA RTKRACVQKK NPL RNKQIM LRLNPYASTF AKEKLGEVKA EEGKPPKVPA SFKELLHEA

UniProtKB: 60S ribosomal protein L4-like protein

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Macromolecule #18: 60S ribosomal protein L6

MacromoleculeName: 60S ribosomal protein L6 / type: protein_or_peptide / ID: 18 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 22.132994 KDa
SequenceString: MSAAPTTKTF GKGTRTVPAP SEKAQKWYPA EDEAQPKKVR KAVRPWTPRK SLQPGTVLIL LAGRFRGKRV VLLKCLDQGV LLVTGPFKI NGVPLRRVNA RYVIATSVKV DLTGVDQAKI DEVAQPKYFT AEKAKEKASE EAFFKQGEKP QKKPVSSTRA A DQKAIDKA ...String:
MSAAPTTKTF GKGTRTVPAP SEKAQKWYPA EDEAQPKKVR KAVRPWTPRK SLQPGTVLIL LAGRFRGKRV VLLKCLDQGV LLVTGPFKI NGVPLRRVNA RYVIATSVKV DLTGVDQAKI DEVAQPKYFT AEKAKEKASE EAFFKQGEKP QKKPVSSTRA A DQKAIDKA LIANIKKVDM LASYLASSFS LRKGDKPHLM KF

UniProtKB: 60S ribosomal protein L6

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Macromolecule #19: 60S ribosomal protein L8

MacromoleculeName: 60S ribosomal protein L8 / type: protein_or_peptide / ID: 19 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 29.74449 KDa
SequenceString: MPPKSGKKVA PAPFPQGKAG AKKAPKNPLL EKRPRNFGIG QDIQPKRNLS RMVKWPEYIR LQRQKKILRM RLKVPPAIAQ FQYTLDKNL AAQAFKLLNK YRPETKQEKK ERLLREATAI KEGKKKEDVS KKPYTVKYGL NHVVGLIENK KASLVLIAND V DPIELVVF ...String:
MPPKSGKKVA PAPFPQGKAG AKKAPKNPLL EKRPRNFGIG QDIQPKRNLS RMVKWPEYIR LQRQKKILRM RLKVPPAIAQ FQYTLDKNL AAQAFKLLNK YRPETKQEKK ERLLREATAI KEGKKKEDVS KKPYTVKYGL NHVVGLIENK KASLVLIAND V DPIELVVF LPALCRKMGI PYAIIKGKAR LGTLVHKKTA AVVAITEVRS EDKNELAKLI SAVKEGYLEK VEDTRKRWGG GI MGFKAQK REEKRKKSLE TAIKV

UniProtKB: 60S ribosomal protein L8

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Macromolecule #20: 60S ribosomal protein L13

MacromoleculeName: 60S ribosomal protein L13 / type: protein_or_peptide / ID: 20 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 24.19118 KDa
SequenceString: MAIKHNQQIP NNHFRKHWQR RVRCHFDQPG KKVTRRLARR AKAAALAPRP VDKLRPIVRC PTVKYNRRTR LGRGFTLEEL KAAGIPRLL APTIGIAVDH RRKNLSEESL AANVQRLKDY KARLILFPRK SNKPKKADTP KDQQTAETTT SLRTSFGVEQ P LAPGFTEI ...String:
MAIKHNQQIP NNHFRKHWQR RVRCHFDQPG KKVTRRLARR AKAAALAPRP VDKLRPIVRC PTVKYNRRTR LGRGFTLEEL KAAGIPRLL APTIGIAVDH RRKNLSEESL AANVQRLKDY KARLILFPRK SNKPKKADTP KDQQTAETTT SLRTSFGVEQ P LAPGFTEI SKSEIPAGIE GGAYRALRKA RSDARLVGVR EKRAKEKAEA EANKK

UniProtKB: 60S ribosomal protein L13

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Macromolecule #21: 60S ribosomal protein L14-like protein

MacromoleculeName: 60S ribosomal protein L14-like protein / type: protein_or_peptide / ID: 21 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 16.111901 KDa
SequenceString:
MAEINVEATS WRRVEVGRVL KLENGSLAAI VEIIDHKRVL ADGPSSDPKL ATPRGIVPLS RALLTPIVIP KLPRGARTGA VKKAWEAYG VDAKWKETNW AKKQLQQERR QSLTDFDRFK VMRLKKQRRF EERKALAKIK AAA

UniProtKB: Putative plasmid related protein

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Macromolecule #22: Ribosomal protein L15

MacromoleculeName: Ribosomal protein L15 / type: protein_or_peptide / ID: 22 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 24.307287 KDa
SequenceString: MGALKYLEEL SKKKQSDVVR FLLRVRCWEY RQLNVIHRAS RPSRPDKARR LGYKAKQGYV IYRVRVRRGG RKRPVPKGAT YGKPTNQGV NQLKYQRSLR ATAEERVGRR CSNLRVLNSY WVNQDSTYKY YEVILVDPNH KAIRRDPRIN WICNPVHKHR E CRGLTSTG ...String:
MGALKYLEEL SKKKQSDVVR FLLRVRCWEY RQLNVIHRAS RPSRPDKARR LGYKAKQGYV IYRVRVRRGG RKRPVPKGAT YGKPTNQGV NQLKYQRSLR ATAEERVGRR CSNLRVLNSY WVNQDSTYKY YEVILVDPNH KAIRRDPRIN WICNPVHKHR E CRGLTSTG KKSRGLNKGH RFNKTRAGRR KTWKRHNTLS LWRYR

UniProtKB: Ribosomal protein L15

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Macromolecule #23: 60S ribosomal protein L16-like protein

MacromoleculeName: 60S ribosomal protein L16-like protein / type: protein_or_peptide / ID: 23 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 22.993195 KDa
SequenceString: MSSFESVVVI DGKGHLLGRL ASIVAKQLLS GQKIVVVRCE ALNISGEFFR AKLKYHAYLR KMTRYNPTRG GPFHFRAPSR IFYKAVRGM IPHKTARGAA ALERLKVFEG VPPPYDKKKK MVVPQALRVL RLQPGRKYCT VGRLSHEVGW KYQDVVARLE E RRKAKGAA ...String:
MSSFESVVVI DGKGHLLGRL ASIVAKQLLS GQKIVVVRCE ALNISGEFFR AKLKYHAYLR KMTRYNPTRG GPFHFRAPSR IFYKAVRGM IPHKTARGAA ALERLKVFEG VPPPYDKKKK MVVPQALRVL RLQPGRKYCT VGRLSHEVGW KYQDVVARLE E RRKAKGAA YYERKKLAAR QLSEAKKAAA AKVDPKVSEA LAAYGY

UniProtKB: 60S ribosomal protein L16-like protein

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Macromolecule #24: 60S ribosomal protein l17-like protein

MacromoleculeName: 60S ribosomal protein l17-like protein / type: protein_or_peptide / ID: 24 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 21.072207 KDa
SequenceString:
MVRYAATEIA PTKSARARGS YLRVSFKNTR ETAQAINGWK LQRALTFLQN VIDKKEAVPM RRYAGSTGRT AQGKQWGVSR ARWPVKSAQ FLIGLLKNAE ANADAKGLDT GNLIIKHIQV NQAPKQRRRT YRAHGRINPY MSNPCHIELI LTEAEETVQK S EAVVRDVE SHLSSRQRGV RIRRALTAA

UniProtKB: 60S ribosomal protein l17-like protein

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Macromolecule #25: Ribosomal protein L18-like protein

MacromoleculeName: Ribosomal protein L18-like protein / type: protein_or_peptide / ID: 25 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 24.195535 KDa
SequenceString: MDLVCAFIGP LFAPGARRLN LEEIAAESSS GIDLRWKHVR SSHRKAPKSD NVYLKLLVKL YRFLARRTEA PFNKVVLRRL FMSRINRPP VSLSRIARNL KNGNEKKTVV VVATVTDDNR LLQVPKMEVA ALRFTAKARA RIEAAGGRTL TLDQLALEKP T GANTLLLR ...String:
MDLVCAFIGP LFAPGARRLN LEEIAAESSS GIDLRWKHVR SSHRKAPKSD NVYLKLLVKL YRFLARRTEA PFNKVVLRRL FMSRINRPP VSLSRIARNL KNGNEKKTVV VVATVTDDNR LLQVPKMEVA ALRFTAKARA RIEAAGGRTL TLDQLALEKP T GANTLLLR GPKNAREAVK HFGFGPHKHK KPYVRSKGRK FERARGRRRS RGFKV

UniProtKB: Ribosomal protein L18-like protein

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Macromolecule #26: 60S ribosomal protein L20

MacromoleculeName: 60S ribosomal protein L20 / type: protein_or_peptide / ID: 26 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 20.341893 KDa
SequenceString:
MGRLQEYQVI GRHLPTEANP NPALYRMRIF APNEVVAKSR FWYFLRGLKK VKKATGEIVS VNVISEKHPL KVKNFGIWLR YDSRSGTHN MYKEYRETSR VAAVEAMYAD MAARHRARFR SIHILKVVEL EKTEDVKRPY IKQLVAKNLS FPLPHRVPKI S TKKIFSAK RPSTFS

UniProtKB: 60S ribosomal protein L20

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Macromolecule #27: 60S ribosomal protein l21-like protein

MacromoleculeName: 60S ribosomal protein l21-like protein / type: protein_or_peptide / ID: 27 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 18.159227 KDa
SequenceString:
MGHAAGLRSG TRYAFSRGFR KHGQIPLSTY LRTYRVGDIV DIKVNGAVQK GMPHKFYHGK TGVVYNVTKS AVGVIVYKRV KHRYIEKRI NVRIEHVKPS RSREDFLRRV KENAELKKKA KAEGVPVQLK RQPAMPREAH TVSIADNKPV TLAPVAYETT I

UniProtKB: 60S ribosomal protein l21-like protein

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Macromolecule #28: 60S ribosomal protein l23-like protein

MacromoleculeName: 60S ribosomal protein l23-like protein / type: protein_or_peptide / ID: 28 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 14.674428 KDa
SequenceString:
MAKQKRGAPG GKLKMTLGLP VGAIMNCADN SGARNLYIIA VKGAGARLNR LPAGGVGDMV MATVKKGKPE LRKKVHPAVI VRQAKPWKR FDGVFLYFED NAGVIVNPKG EMKGSAITGP VGKEAAELWP RIASNAGVVM

UniProtKB: 60S ribosomal protein l23-like protein

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Macromolecule #29: 60S ribosomal protein L26-like protein

MacromoleculeName: 60S ribosomal protein L26-like protein / type: protein_or_peptide / ID: 29 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 15.565322 KDa
SequenceString:
MKVRPTVSSS RRKARKAHFS APSSVRRVIM SAPLSKELRE KYNVRSIPIR KGDEVQIVRG AHKDKEGKVT SVYRLKYVIH VERVTREKA TGQTVPIGIH PSNVVITKLH LDKDRENILA RIKAGREQVA KAKGKKTAA

UniProtKB: 60S ribosomal protein L26-like protein

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Macromolecule #30: 60S ribosomal protein L32-like protein

MacromoleculeName: 60S ribosomal protein L32-like protein / type: protein_or_peptide / ID: 30 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 15.095985 KDa
SequenceString:
MVAAKKHVPI VKKRTKRFMR HQSDRFKCLD SAWRKPKGID NRVRRRFKGN LAMPSIGYGS NKKTKHMMPS GHKAFLVHNV KDVELLLMH NRTYAAEIAH NVSSRKRIDI ITRAKQLGVK VTNAKAKVTT EV

UniProtKB: 60S ribosomal protein L32-like protein

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Macromolecule #31: 60S ribosomal protein l33-like protein

MacromoleculeName: 60S ribosomal protein l33-like protein / type: protein_or_peptide / ID: 31 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 12.330337 KDa
SequenceString:
MPSEAGHRLY VKGRHLSYQR GRRNTHPKTS LIKIEGVDDT AAANFYLGKR VAYVYRAQKE VRGTKIRVIW GKITRPHGNS GVVRAKFTH PLPARSFGAS VRIMLYPSSI

UniProtKB: 60S ribosomal protein l33-like protein

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Macromolecule #32: dolichyl-diphosphooligosaccharide--protein glycotransferase

MacromoleculeName: dolichyl-diphosphooligosaccharide--protein glycotransferase
type: protein_or_peptide / ID: 32 / Number of copies: 1 / Enantiomer: LEVO
EC number: dolichyl-diphosphooligosaccharide-protein glycotransferase
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 105.169227 KDa
SequenceString: MSSNGKVKAG QLWSKNKEEL TKILGELKTE LSQLRIQKIS SSGAKLNKIH DLRKSIARVL TVINAKQRAQ LRLFYKNKKY LPLDLRPKL TRALRRRLSK EDASRVLEKT KKRLTHFPQR KYAVKAATYS EGPALSIYHS HQREARCSLV QCCTFEPELR E SLLLLPVA ...String:
MSSNGKVKAG QLWSKNKEEL TKILGELKTE LSQLRIQKIS SSGAKLNKIH DLRKSIARVL TVINAKQRAQ LRLFYKNKKY LPLDLRPKL TRALRRRLSK EDASRVLEKT KKRLTHFPQR KYAVKAATYS EGPALSIYHS HQREARCSLV QCCTFEPELR E SLLLLPVA ASLKGPNFTR RERQHRNPSE ATMSAAEPLK LLASAGKGKS TRSVLRVAIL VLIAGAAVAS RLFSVIRFES II HEFDPWF NFRATKYLVA NGFYKFWDWF DDRTWHPLGR VTGGTLYPGL MVTSGVIYHL LRFLTVPVDI RNICVLLAPG FSG LTAIAA YLLTNEMTTS PSAGLLAAAF MGIAPGYISR SVAGSYDNEA IAIFLLVFTF FLWIKALKQG SMLWGALCAL FYGY MVASW GGYAFITCLL PLHSFVLICM GRYSTRLYVA YTTWYALGTL ASMQIPFVGF LPVKTSEHMP ALGIFGFLQL LAFLD YVRS TISSRQFQTF LWLFAGGIFG LGLLGLVIAT SAGLIAPWSG RFYSLWDTGY AKIHIPIIAS VSEHQPTAWP AFFFDL NML VWLFPVGVYL CFQQLGDEHV FIIVYALFGS YFAGVMVRLM LTLTPVVCVA AAIAFSSLLD TYLNLKTPNP GQAQATE DA GKKKSGLKAA SKPAVGVYAL WGKTMMISGL TIYLLLFVLH CTWVTSNAYS SPSVVLASRL PDGSQHIIDD YREAYQWL R QNTREDAKIM SWWDYGYQIG GMADRPTLVD NNTWNNTHIA TVGKAMASRE EVSYPIMRQH EVDYVLVVFG GLLGYSGDD INKFLWMVRI AEGIWPDEVS ERAFFTPRGE YRVDAEATDT MKNSLMYKMC YYNYNNLFPP GQAVDRMRGV RLPEVGPTLN TLEEAFTSE NWIIRIYKVK DLDNLGRDHA SAAAFERGHK KKKATKKRGP RVLRVE

UniProtKB: dolichyl-diphosphooligosaccharide--protein glycotransferase

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Macromolecule #33: 60S ribosomal protein L36

MacromoleculeName: 60S ribosomal protein L36 / type: protein_or_peptide / ID: 33 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 12.784053 KDa
SequenceString:
MSEDATPKAP VERTGLIRGL NKGHKTTRRV LKERPSRRKG AQSKRTQFVR SLIREVAGLA PYERRVIELL RNGKDKRARK FSKKKLGTF GRAKRKCEEL QRIIAESRRA H

UniProtKB: 60S ribosomal protein L36

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Macromolecule #34: Ribosomal protein L37

MacromoleculeName: Ribosomal protein L37 / type: protein_or_peptide / ID: 34 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 10.660455 KDa
SequenceString:
MTKGTSSFGK RHNKTHGLCR RCGRRSLHNQ KKVCASCGYP AAKTRKYNWS EKAKRRKVTG TGRMRYLSTV PRRFKNGFRT GVPKGARGP AVSTSS

UniProtKB: Ribosomal protein L37

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Macromolecule #35: Ribosomal RNA-processing protein 1

MacromoleculeName: Ribosomal RNA-processing protein 1 / type: protein_or_peptide / ID: 35 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 32.128604 KDa
SequenceString: MTSQEKSMPF IKHLASSDRK VRTAALNSLH AFLSARQVAS ALTTLDVLKL WKGLFYALWM CDRAIPQQNL CNELADLIWQ LPRESVATW LRGFWATMAR EWTGIDVLRM EKFLLLVRRV LGASFKWMKK DGSLGKRTHD GQEKAVKTGA WDQSKVDEVL G LLAEWPFS ...String:
MTSQEKSMPF IKHLASSDRK VRTAALNSLH AFLSARQVAS ALTTLDVLKL WKGLFYALWM CDRAIPQQNL CNELADLIWQ LPRESVATW LRGFWATMAR EWTGIDVLRM EKFLLLVRRV LGASFKWMKK DGSLGKRTHD GQEKAVKTGA WDQSKVDEVL G LLAEWPFS LAEEVRITQS SEKGGEIVQK IPVGMRLHVL DIWVDEVERV GLLNEDEEEA RMIVQRISDM VDALEQTTKS PA VRTRSKD SLGDDRLPAN RRPNSSQDHD TKDMGDSDSW EGFDD

UniProtKB: Ribosomal RNA-processing protein 1

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Macromolecule #36: Brix domain-containing protein

MacromoleculeName: Brix domain-containing protein / type: protein_or_peptide / ID: 36 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 49.471938 KDa
SequenceString: MAASKSKDLS RVSLARTIGN KLKRQQLYIQ AKKANSRAKH EERHRRRKEE AKNPELKQKR LEKNQPASID KKRIWDDLDD DSLGAVVDV AELKRRRLEV AEAAAAAEAD AAAREDQEVD DKNDENEKRD DDIDSMLGSD DEDEEDEGAK KEKEEEMQRQ R AQRQPSIA ...String:
MAASKSKDLS RVSLARTIGN KLKRQQLYIQ AKKANSRAKH EERHRRRKEE AKNPELKQKR LEKNQPASID KKRIWDDLDD DSLGAVVDV AELKRRRLEV AEAAAAAEAD AAAREDQEVD DKNDENEKRD DDIDSMLGSD DEDEEDEGAK KEKEEEMQRQ R AQRQPSIA PSTTSTNLDL TPDSLTSQFP NLFADEPPPV PKILVTTGIN GTIHKEAEEI ASIFPNATYI RRTAHRYAYK YS VREIAKF AKNRGYTALL VVQEDQKRPS RLVVVHLNGE GVPPGPTLTY TIRNYAPGKA IPGHGRATNH YPELLLNNFK TPL GLLAAK SMHILFPSKP ELAGRQVVTL HNQRDYIFFR RHRYVFREAR PTEKNVVGAD GKEMEGVKGI RAGLQEIGPR MTLK LRRVD KGVGRAGSEG PDAVKWEWKA KMEKKRTRFN L

UniProtKB: Brix domain-containing protein

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Macromolecule #37: Protein MAK16

MacromoleculeName: Protein MAK16 / type: protein_or_peptide / ID: 37 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 39.464891 KDa
SequenceString: MSDEIVWQII NQQFCAFKLK TTKGQNFCRN EYSVSGLCNR QSCPLANSRY ATVRQSPKGT IYLYIKTIER SHMPSKWWEK IKLSQNYQK ALEQIDQRLQ FFPKFLIHKC KQRLTRLVQV AIRMRRIAAE EARLGEKLVP KMAPKIKKRE EARERKALAA A KLERTIER ...String:
MSDEIVWQII NQQFCAFKLK TTKGQNFCRN EYSVSGLCNR QSCPLANSRY ATVRQSPKGT IYLYIKTIER SHMPSKWWEK IKLSQNYQK ALEQIDQRLQ FFPKFLIHKC KQRLTRLVQV AIRMRRIAAE EARLGEKLVP KMAPKIKKRE EARERKALAA A KLERTIER ELLDRLRQGA YGDQPLNCNP QIWKKVLNAL EAEGEGVRDK DHDKGIEADE EGLESAEESE VEYEREEENE ED NVVEYVS DFEESEDELG DLEDWLGSDD EEFDDEDDDD EDDDDEDDDE SEEDDEEELK KKKAGDKRKR GKAVKPKARK RKE LEIERE EADRAKLLAF

UniProtKB: Protein MAK16

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Macromolecule #38: 60S ribosome biogenesis protein Rrp14

MacromoleculeName: 60S ribosome biogenesis protein Rrp14 / type: protein_or_peptide / ID: 38 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 64.46543 KDa
SequenceString: MSDEDTSLQE RLREHARAFD GLLSLIPAKV YYGDSNNDNQ WKKKKQTKDE AKAAKRGKLD PDSELNRSAK DVMDERARNK RKLQELEAD EASASSDQDD DSSDISIPGI IKEKPGEGLK KKKPKLAEDA EEEEEPEKPA ADNTTKEEHE APKQPLSKKQ Q AKEEKKAL ...String:
MSDEDTSLQE RLREHARAFD GLLSLIPAKV YYGDSNNDNQ WKKKKQTKDE AKAAKRGKLD PDSELNRSAK DVMDERARNK RKLQELEAD EASASSDQDD DSSDISIPGI IKEKPGEGLK KKKPKLAEDA EEEEEPEKPA ADNTTKEEHE APKQPLSKKQ Q AKEEKKAL KKQRKEEAKK QKEEEAKATT PSTTDKAEKP KQDTVEKTLK KEQKKKPRPA EDEAESDSEG EEPTGKQPVK SV EAAESDS EDDMAPIDVS GLDYKDESAD SSQESATNSV FDGKITSTEP ASTTTSMSSA VPPSEKPKYL KIPADTSALR ARL EAKLAA LRAARKADDP EGKPIRTRQE LIEARRQKQA ERKARKKELR RLAKEQEERK REEALASARN SPGLSPLLGK EEID PGETH FAFGRVNFND GTQLSHDLTY AKSADSEKKK KGPSDPKSAL MQLEAKKKRL EALPEEKRKE IEEKEQWLAA RRRAE GIKV HDDESLLKKA LKRKEARKKK SEREWKERIK AVEQSKQERQ RKREENIRKR REEKLARKAG KGKLKGVQTK KKNRPG FEG GFGGGKK

UniProtKB: Uncharacterized protein

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Macromolecule #39: Ribosome production factor 2 homolog

MacromoleculeName: Ribosome production factor 2 homolog / type: protein_or_peptide / ID: 39 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 39.92734 KDa
SequenceString: MLRQIKPRNA RSKRALEKRA PKIVENPKTC LFLRGTTCSQ ITQDAMNDLY AMRQVHAKRF HKKNAIHPFE DATSLCFFSE KNDCSLMVF GSSNKKRPHT LTFVRMFDYK VLDMLEFYLD PDTYRSISQF KTSKIPIGMR PMMVFAGTAF ESPVPNAFTM A KSMLIDFF ...String:
MLRQIKPRNA RSKRALEKRA PKIVENPKTC LFLRGTTCSQ ITQDAMNDLY AMRQVHAKRF HKKNAIHPFE DATSLCFFSE KNDCSLMVF GSSNKKRPHT LTFVRMFDYK VLDMLEFYLD PDTYRSISQF KTSKIPIGMR PMMVFAGTAF ESPVPNAFTM A KSMLIDFF RGEPSDKIDV EGLRFVVVVT ADEPTSSTST NNDGENPAPL PGMTDPRSID PSQKPILRLR VYGIRTKRSG TR LPRVEVE EHGPRMDFRL GRMREPDPAM LKEAMKKAKT PQEERTKKNI SMDLLGDKIG RIHMGKTDLS KLQTRKMKGL KRG RDEDEG GEDDRTDVVE AGSGEKKKKK KVKG

UniProtKB: Ribosome production factor 2 homolog

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Macromolecule #40: Brix domain-containing protein

MacromoleculeName: Brix domain-containing protein / type: protein_or_peptide / ID: 40 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 54.249277 KDa
SequenceString: MAKRRHKKRT HVGAHNPPNA AQVNGHANIK DPKSMVIRIG AGEVGTSVSQ LCTDVRKVME PGTASRLKER KANRLRDYVT MCGPLGVTH LLLFSRSTSG NVNLRLVVAP RGPTFHFRVE KYSLTKDVRR AQRHPKGGGK EYMTPPLLVM NNFTDPKSDA H SKVPRHLE ...String:
MAKRRHKKRT HVGAHNPPNA AQVNGHANIK DPKSMVIRIG AGEVGTSVSQ LCTDVRKVME PGTASRLKER KANRLRDYVT MCGPLGVTH LLLFSRSTSG NVNLRLVVAP RGPTFHFRVE KYSLTKDVRR AQRHPKGGGK EYMTPPLLVM NNFTDPKSDA H SKVPRHLE SLTTTAFQSL FPPINPQTTP LKSIRRVLLL NRELSPENDG KFVVNFRHYL ITTKPVGLSK PLRRLNAAEK ML KSKKGRK AGVPNLGKLR DISEFLIGGE DGQGYMTDGT SGSEPDTDAE VEVLETTTKK VHSGKPREQQ NDEDEGATHE SVE RRAVKL VELGPRMRLR MTKVEEGLCS GKVLWHEYVS KSKEEIKELE QRWEQRRKEK EARKKQQKEN VEKKRKAKEA QRQQ QQQSG EGGKDEVPNG DEMDVDEEYN SDLFDDEDVF DSEGLEGDAE EQVNARMEEE GEWEDEEEEI AQGKSSKRKS MKR

UniProtKB: Brix domain-containing protein

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Macromolecule #41: RNA methyltransferase nop2-like protein

MacromoleculeName: RNA methyltransferase nop2-like protein / type: protein_or_peptide / ID: 41 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 83.658305 KDa
SequenceString: MGTKRRLKHQ GPPEPLPEEH FLKLKRKKGL PVEDTTPAEA PSAKKRRTST KEKETKPHKA TTKQTNGTKK APGAPSNGEK ASKPKPKKL PESEPESDVE MDDEFGGSDL DDVSISGSDT SEPKLGSDFM ASDDDSVYDS EQDEGPGKKT KFVFSDDEDE D EDEIEQKL ...String:
MGTKRRLKHQ GPPEPLPEEH FLKLKRKKGL PVEDTTPAEA PSAKKRRTST KEKETKPHKA TTKQTNGTKK APGAPSNGEK ASKPKPKKL PESEPESDVE MDDEFGGSDL DDVSISGSDT SEPKLGSDFM ASDDDSVYDS EQDEGPGKKT KFVFSDDEDE D EDEIEQKL TAANIEGLSR KLDEQLAREA EENEEEIRNQ ALQTNIDGDK PKILEGNEED ELAAKTNGLL APDLQMLRTR IT DTIRVLE DFQNLAEEGR SRAEYTNQLL KDICAYYGYN EYLAEKLLNL FPPREAFAFF EANETPRPVV IRTNTLRTHR RDL AQALIN RGVTLEPVGK WSKVGLQVFD SKVPLGATPE YLAGHYILQA ASSFLPVMAL CPQENERCLD MAAAPGGKTT HMAA LMKNT GVIFANDPSK SRAKGLIGNI HRLGVRNTIV CNYDAREFPR VIGGFDRVLL DAPCSGTGVI CKDPSVKTNR DAKDF MQLP HTQKQLLLAA IDSCNHASKT GGYIVYSTCS VCVEENEEVV NYALSRRPNV KLVETGLPFG KEGFTSYMGK TFHPSL KLT RRFYPHLYNV DGFFVAKFKK IGPTPPNAVL ANGKKDQPKP ANATGEEEII DKTPIGAEEQ KKEDDFGGWD DEEDKVY ME RAKRNAMRRR GLDPRALKKP QGKKDDKDGE ASKEGANGET KKAATEQKKT EEKKTEEKKA EEKKAEKAKE EKPKAKAE K TTEKAKEGAK EKVKEQNKAN DKKEKAKGKK

UniProtKB: RNA methyltransferase nop2-like protein

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Macromolecule #42: 60S ribosome subunit biogenesis protein NIP7

MacromoleculeName: 60S ribosome subunit biogenesis protein NIP7 / type: protein_or_peptide / ID: 42 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 20.685982 KDa
SequenceString:
MRPLTDQEMK IVLDKLANYM TDLKSLIAPL EDGDRYVFRM QKDRVYYVKL SIANIATCVA RDKLLSLGTC LGKMTKSGKF RLHITALPI LAQNARYKIW VKDNGAQPFL YGSNIVKAHV GRWTEDCPEH SGCVVYNMAD IPLGFGVTAR STAEARRLDP T GIVCFRQA DCGEYLRDED TLFTGA

UniProtKB: 60S ribosome subunit biogenesis protein NIP7

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Macromolecule #43: Ribosomal protein

MacromoleculeName: Ribosomal protein / type: protein_or_peptide / ID: 43 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 24.055332 KDa
SequenceString: MSKITVAGVR QNVAELLDYS NNVKKRNFLE TVELQIGLKN YDPQRDKRFS GTVKLPTVPR PNMSICILGD QHDIDRAKHG GIDAMSADD LKKLNKNKKL IKKLARKYDA FIASESLIKQ IPRLLGPGLS KAGKFPTPVS HSDDLSAKVN EVKSTVKFQL K KVLCMGVA ...String:
MSKITVAGVR QNVAELLDYS NNVKKRNFLE TVELQIGLKN YDPQRDKRFS GTVKLPTVPR PNMSICILGD QHDIDRAKHG GIDAMSADD LKKLNKNKKL IKKLARKYDA FIASESLIKQ IPRLLGPGLS KAGKFPTPVS HSDDLSAKVN EVKSTVKFQL K KVLCMGVA VGNVGMTQEQ LVANIMLAIN YLVSLLKKGW QNVGSLTIKA TMSPPKRLY

UniProtKB: Ribosomal protein

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Macromolecule #44: Ribosome biogenesis regulatory protein

MacromoleculeName: Ribosome biogenesis regulatory protein / type: protein_or_peptide / ID: 44 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 22.817281 KDa
SequenceString: MSTDTSKPAR LPVTVEKPTP YTFDLGLLLA NDPNPVNVPK TTDTQVLEQH LASVARDGAQ VLINQLLTTT TITATKDGVL LTLPPPTTP LPREKPVPQP KPETKWQAFA RRRGIKPKTR EQRRNLQYNP TTGQWERKWG YKGANKRGET DPIIEVSAAK E AMRPEGTS ...String:
MSTDTSKPAR LPVTVEKPTP YTFDLGLLLA NDPNPVNVPK TTDTQVLEQH LASVARDGAQ VLINQLLTTT TITATKDGVL LTLPPPTTP LPREKPVPQP KPETKWQAFA RRRGIKPKTR EQRRNLQYNP TTGQWERKWG YKGANKRGET DPIIEVSAAK E AMRPEGTS VRGDKRREIR ARVKKNQKQM LRNQRIAAEK MGKK

UniProtKB: Ribosome biogenesis regulatory protein

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Macromolecule #45: Putative ribosomal protein

MacromoleculeName: Putative ribosomal protein / type: protein_or_peptide / ID: 45 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 20.119275 KDa
SequenceString:
MSSEKAQNPM RELRIQKLVL NISVGESGDR LTRAAKVLEQ LSGQTPVYSK ARYTVRQFGI RRNEKIAVHV TVRGPKAEEI LERGLKVKE YELRRRNFSE TGNFGFGISE HIDLGIKYDP SIGIYGMDFY CCMTRPGERV AKRRRCKSRI GASHRITREE T IRWFKQRF DGIVR

UniProtKB: Putative ribosomal protein

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Macromolecule #46: 60S ribosomal protein l5-like protein

MacromoleculeName: 60S ribosomal protein l5-like protein / type: protein_or_peptide / ID: 46 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 35.034605 KDa
SequenceString: MAFHKLVKNS AYYSRFQTKF KRRRQGKTDY YARKRLITQA KNKYNAPKYR LVVRFTNRDI ITQMVTSEIN GDKIFAAAYS HELRAYGIN HGLTNWAAAY ATGLLLARRV LAKLGLDKTF TGVEEPNGEY TLTEAAETED GERRPFKAIL DVGLARTSTG A RVFGVMKG ...String:
MAFHKLVKNS AYYSRFQTKF KRRRQGKTDY YARKRLITQA KNKYNAPKYR LVVRFTNRDI ITQMVTSEIN GDKIFAAAYS HELRAYGIN HGLTNWAAAY ATGLLLARRV LAKLGLDKTF TGVEEPNGEY TLTEAAETED GERRPFKAIL DVGLARTSTG A RVFGVMKG ASDGGIFIPH SENRFPGYDI ETEELDTEVL KKYIYGGHVA EYMETLADDD EERYKSQFVK YIEDDVEADS LE ELYAEAH KQIRADPFRK YVSDAPKKSK EEWKAESLKY KKAKLSREER KARVEAKIKQ LLAEQDE

UniProtKB: 60S ribosomal protein l5-like protein

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Macromolecule #48: 60S ribosomal subunit-like protein

MacromoleculeName: 60S ribosomal subunit-like protein / type: protein_or_peptide / ID: 48 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 22.678574 KDa
SequenceString: MGKTRTIKNK HAEPSKKKAK KAGDGGVKKT KDRAGSKSKA KVPAIEVKGK PNLGQDKKKQ KRVYSEKELG IPQLNTVTPV GVTKPKGKK KGKVFVDDRE SMNTILAMVE AEKQGQIESK IMRARQLEEI REARRIEAEK KEAERKALLE NTKEQLRKKR K KNKKGGDQ ...String:
MGKTRTIKNK HAEPSKKKAK KAGDGGVKKT KDRAGSKSKA KVPAIEVKGK PNLGQDKKKQ KRVYSEKELG IPQLNTVTPV GVTKPKGKK KGKVFVDDRE SMNTILAMVE AEKQGQIESK IMRARQLEEI REARRIEAEK KEAERKALLE NTKEQLRKKR K KNKKGGDQ KSSEDEGPSL KELTSTGSKA VKSKKKKKVS FATPE

UniProtKB: 60S ribosomal subunit-like protein

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Macromolecule #49: ZINC ION

MacromoleculeName: ZINC ION / type: ligand / ID: 49 / Number of copies: 3 / Formula: ZN
Molecular weightTheoretical: 65.409 Da

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Experimental details

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Structure determination

Methodcryo EM
Processingsingle particle reconstruction
Aggregation stateparticle

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Sample preparation

BufferpH: 7.4
VitrificationCryogen name: ETHANE

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Electron microscopy

MicroscopeFEI TITAN KRIOS
Image recordingFilm or detector model: GATAN K2 SUMMIT (4k x 4k) / Detector mode: COUNTING / Average electron dose: 44.0 e/Å2
Electron beamAcceleration voltage: 300 kV / Electron source: FIELD EMISSION GUN
Electron opticsIllumination mode: FLOOD BEAM / Imaging mode: BRIGHT FIELD / Nominal defocus max: 2.5 µm / Nominal defocus min: 0.8 µm
Experimental equipment
Model: Titan Krios / Image courtesy: FEI Company

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Image processing

Startup modelType of model: EMDB MAP
EMDB ID:

3891

Final reconstructionResolution.type: BY AUTHOR / Resolution: 3.1 Å / Resolution method: FSC 0.143 CUT-OFF / Number images used: 41599
Initial angle assignmentType: OTHER / Details: Relion
Final angle assignmentType: OTHER / Details: Relion
FSC plot (resolution estimation)

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