[English] 日本語
Yorodumi
- EMDB-35286: Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal ... -

+
Open data


ID or keywords:

Loading...

-
Basic information

Entry
Database: EMDB / ID: EMD-35286
TitleCryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Dbp10-3
Map datalocal_resolution filtered map
Sample
  • Complex: pre-60S ribosome
    • Complex: ribosome
      • RNA: x 2 types
      • Protein or peptide: x 49 types
  • Ligand: x 2 types
KeywordsRibosome / Ribosome biogenesis / pre-60S ribosome
Function / homology
Function and homology information


Noc1p-Noc2p complex / Noc2p-Noc3p complex / dolichyl-diphosphooligosaccharide-protein glycotransferase / dolichyl-diphosphooligosaccharide-protein glycotransferase activity / rRNA (uridine-2'-O-)-methyltransferase activity / rRNA (guanine) methyltransferase activity / rRNA (cytosine-C5-)-methyltransferase activity / intracellular mRNA localization / protein N-linked glycosylation via asparagine / PeBoW complex ...Noc1p-Noc2p complex / Noc2p-Noc3p complex / dolichyl-diphosphooligosaccharide-protein glycotransferase / dolichyl-diphosphooligosaccharide-protein glycotransferase activity / rRNA (uridine-2'-O-)-methyltransferase activity / rRNA (guanine) methyltransferase activity / rRNA (cytosine-C5-)-methyltransferase activity / intracellular mRNA localization / protein N-linked glycosylation via asparagine / PeBoW complex / maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / rRNA base methylation / ribosomal large subunit binding / preribosome, large subunit precursor / nuclear-transcribed mRNA catabolic process / DNA replication initiation / mRNA transport / ribonucleoprotein complex binding / ribosomal subunit export from nucleus / maturation of LSU-rRNA / translation initiation factor activity / endomembrane system / post-translational protein modification / nuclear periphery / ribosomal large subunit biogenesis / maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / cytosolic ribosome assembly / ribosome assembly / rRNA processing / ribosome biogenesis / large ribosomal subunit / ribosomal large subunit assembly / large ribosomal subunit rRNA binding / gene expression / cytosolic large ribosomal subunit / cytoplasmic translation / RNA helicase activity / negative regulation of translation / rRNA binding / structural constituent of ribosome / RNA helicase / ribosome / translation / ribonucleoprotein complex / mRNA binding / chromatin binding / GTP binding / nucleolus / ATP hydrolysis activity / RNA binding / zinc ion binding / nucleoplasm / ATP binding / metal ion binding / membrane / cytoplasm / cytosol
Similarity search - Function
DBP10, C-terminal / DDX54/DBP10 family / DBP10CT (NUC160) domain / DBP10CT (NUC160) domain / 60S ribosomal subunit assembly/export protein Loc1 / : / Methyltr_RsmF/B-like, ferredoxin-like domain / Nucleolar complex protein 2 / Noc2p family / Nucleolar complex-associated protein 3, N-terminal ...DBP10, C-terminal / DDX54/DBP10 family / DBP10CT (NUC160) domain / DBP10CT (NUC160) domain / 60S ribosomal subunit assembly/export protein Loc1 / : / Methyltr_RsmF/B-like, ferredoxin-like domain / Nucleolar complex protein 2 / Noc2p family / Nucleolar complex-associated protein 3, N-terminal / Nucleolar complex-associated protein 3 / Nucleolar complex-associated protein / Ribosome biogenesis factor, NIP7 / RNA (C5-cytosine) methyltransferase, NOP2 / : / UPF0113, pre-PUA domain / UPF0113 PUA domain / NIP7/UPF0113, pre-PUA domain / UPF0113, PUA domain / Nop2p / Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site / NOL1/NOP2/sun family signature. / : / STT3/PglB/AglB core domain / Ribosomal RNA methyltransferase, SPB1-like, C-terminal / Ribosomal RNA methyltransferase Spb1, domain of unknown function DUF3381 / AdoMet-dependent rRNA methyltransferase SPB1-like / Spb1 C-terminal domain / Ribosomal RNA methyltransferase Spb1, DUF3381 / Cgr1-like / Cgr1 family / : / Eukaryotic rRNA processing / Eukaryotic rRNA processing protein EBP2 / : / Ribosomal RNA large subunit methyltransferase E / Ribosome biogenesis protein BRX1 / DDX18/Has1, DEAD-box helicase domain / Ribosome biogenesis protein Nop16 / Ribosome biogenesis protein Nop16 / Domain of unknown function DUF4217 / : / ATP-dependent rRNA helicase SPB4-like, C-terminal extension / DUF4217 / Oligosaccharyl transferase, STT3 subunit / Oligosaccharyl transferase STT3, N-terminal / Domain of unknown function DUF2423 / YBL028C ribosome biogenesis factor, N-terminal domain / BOP1, N-terminal domain / WD repeat BOP1/Erb1 / BOP1NT (NUC169) domain / BOP1NT (NUC169) domain / SAM-dependent methyltransferase RsmB/NOP2-type / RNA (C5-cytosine) methyltransferase / : / 16S rRNA methyltransferase RsmB/F / SAM-dependent MTase RsmB/NOP-type domain profile. / Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase / Guanine nucleotide-binding protein-like 3, N-terminal domain / GNL3L/Grn1 putative GTPase / CCAAT-binding factor / CBF/Mak21 family / PUA domain / PUA domain superfamily / PUA domain profile. / : / Pescadillo / Pescadillo N-terminus / Ribosomal biogenesis NSA2 family / GTP-binding protein, orthogonal bundle domain superfamily / Ribosome assembly factor Mrt4 / : / NOG, C-terminal / Nucleolar GTP-binding protein 1 / NOGCT (NUC087) domain / Nucleolar GTP-binding protein 1, Rossman-fold domain / NOG1, N-terminal helical domain / Nucleolar GTP-binding protein 1 (NOG1) / NOG1 N-terminal helical domain / Circularly permuted (CP)-type guanine nucleotide-binding (G) domain / Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. / Brix domain / Brix domain / Brix domain profile. / Brix / OBG-type guanine nucleotide-binding (G) domain / OBG-type guanine nucleotide-binding (G) domain profile. / Translation initiation factor IF6 / eIF-6 family / translation initiation factor 6 / DEAD-box subfamily ATP-dependent helicases signature. / ATP-dependent RNA helicase DEAD-box, conserved site / 50S ribosome-binding GTPase / RNA helicase, DEAD-box type, Q motif / DEAD-box RNA helicase Q motif profile. / GTP binding domain / BRCA1 C Terminus (BRCT) domain / PUA-like superfamily / Ribosomal protein L28e / 50S ribosomal protein L10, insertion domain superfamily
Similarity search - Domain/homology
Large ribosomal subunit protein uL3 / Brix domain-containing protein / 60S ribosomal protein L26-like protein / ATP-dependent RNA helicase / Ribosomal protein L15 / Ribosome biogenesis protein NSA2 homolog / 60S ribosomal protein L6 / Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3 / 60S ribosomal protein l9-like protein / 60S ribosomal protein l21-like protein ...Large ribosomal subunit protein uL3 / Brix domain-containing protein / 60S ribosomal protein L26-like protein / ATP-dependent RNA helicase / Ribosomal protein L15 / Ribosome biogenesis protein NSA2 homolog / 60S ribosomal protein L6 / Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3 / 60S ribosomal protein l9-like protein / 60S ribosomal protein l21-like protein / Ribosomal protein L37 / Putative RNA-binding protein / 60S ribosomal protein L14-like protein / 60S ribosome subunit biogenesis protein NIP7 / Ribosome biogenesis protein RLP24 / Ribosomal protein / 60S ribosomal protein L25-like protein / Nucleolar complex-associated protein 3 / RNA helicase / Large ribosomal subunit protein uL10 / Eukaryotic translation initiation factor 6 / 60S ribosomal protein L32-like protein / Uncharacterized protein / Nucleolar protein 16 / Nucleolar GTP-binding protein 1 / 60S ribosomal protein L13 / Ribosomal protein L18-like protein / 60S ribosomal protein L8 / 60S ribosomal protein L36 / 60S ribosomal protein L20 / Ribosome biogenesis protein ERB1 / 60S ribosomal protein l33-like protein / rRNA-processing protein / Putative NOC2 family protein / Putative 60S ribosomal protein / Putative GTP binding protein / 60S ribosomal protein L4-like protein / 60S ribosomal protein l7-like protein / rRNA processing protein / Uncharacterized protein / 60S ribosomal protein L12-like protein / 60S ribosomal subunit-like protein / Large ribosomal subunit protein uL22 / 60S ribosomal protein L16-like protein / Putative 60S ribosomal protein / DUF2423 domain-containing protein / Nucleolar protein 2 / Pescadillo homolog / 60S ribosomal protein l23-like protein
Similarity search - Component
Biological speciesChaetomium thermophilum (fungus)
Methodsingle particle reconstruction / cryo EM / Resolution: 3.1 Å
AuthorsLau B / Huang Z / Beckmann R / Hurt E / Cheng J
Funding support1 items
OrganizationGrant numberCountry
Not funded
CitationJournal: EMBO Rep / Year: 2023
Title: Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
Authors: Benjamin Lau / Zixuan Huang / Nikola Kellner / Shuangshuang Niu / Otto Berninghausen / Roland Beckmann / Ed Hurt / Jingdong Cheng /
Abstract: Ribosome biogenesis proceeds along a multifaceted pathway from the nucleolus to the cytoplasm that is extensively coupled to several quality control mechanisms. However, the mode by which 5S ...Ribosome biogenesis proceeds along a multifaceted pathway from the nucleolus to the cytoplasm that is extensively coupled to several quality control mechanisms. However, the mode by which 5S ribosomal RNA is incorporated into the developing pre-60S ribosome, which in humans links ribosome biogenesis to cell proliferation by surveillance by factors such as p53-MDM2, is poorly understood. Here, we report nine nucleolar pre-60S cryo-EM structures from Chaetomium thermophilum, one of which clarifies the mechanism of 5S RNP incorporation into the early pre-60S. Successive assembly states then represent how helicases Dbp10 and Spb4, and the Pumilio domain factor Puf6 act in series to surveil the gradual folding of the nearby 25S rRNA domain IV. Finally, the methyltransferase Spb1 methylates a universally conserved guanine nucleotide in the A-loop of the peptidyl transferase center, thereby licensing further maturation. Our findings provide insight into the hierarchical action of helicases in safeguarding rRNA tertiary structure folding and coupling to surveillance mechanisms that culminate in local RNA modification.
History
DepositionFeb 7, 2023-
Header (metadata) releaseMay 17, 2023-
Map releaseMay 17, 2023-
UpdateOct 16, 2024-
Current statusOct 16, 2024Processing site: PDBc / Status: Released

-
Structure visualization

Supplemental images

emd_35286.png

Downloads & links

-
Map

FileDownload / File: emd_35286.map.gz / Format: CCP4 / Size: 282.6 MB / Type: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
Annotationlocal_resolution filtered map
Projections & slices

Image control

Size
Brightness
Contrast
Others
AxesZ (Sec.)Y (Row.)X (Col.)
1.05 Å/pix.
x 420 pix.
= 438.9 Å		1.05 Å/pix.
x 420 pix.
= 438.9 Å		1.05 Å/pix.
x 420 pix.
= 438.9 Å

Surface

Projections

Slices (1/3)

Slices (1/2)

Slices (2/3)

Images are generated by Spider.

Voxel sizeX=Y=Z: 1.045 Å
Density

Histogram

Histogram (log scale)
Contour LevelBy AUTHOR: 0.02
Minimum - Maximum-0.26588824 - 0.49650466
Average (Standard dev.)-0.000037619644 (±0.010672354)
SymmetrySpace group: 1
Details

EMDB XML:

Map geometry
Axis orderXYZ
Origin000
Dimensions420420420
Spacing420420420
CellA=B=C: 438.9 Å
α=β=γ: 90.0 °

-
Supplemental data

-
Additional map: DeepEMhancer filtered map

Fileemd_35286_additional_1.map
AnnotationDeepEMhancer filtered map
Projections & Slices
AxesZYX

Projections

Slices (1/2)
Density Histograms

Histogram

Histogram (log scale)

-
Half map: #2

Fileemd_35286_half_map_1.map
Projections & Slices
AxesZYX

Projections

Slices (1/2)
Density Histograms

Histogram

Histogram (log scale)

-
Half map: #1

Fileemd_35286_half_map_2.map
Projections & Slices
AxesZYX

Projections

Slices (1/2)
Density Histograms

Histogram

Histogram (log scale)

-
Sample components

+
Entire : pre-60S ribosome

EntireName: pre-60S ribosome
Components
  • Complex: pre-60S ribosome
    • Complex: ribosome
      • RNA: RNA (3341-MER)
      • RNA: RNA (319-MER)
      • Protein or peptide: Brix domain-containing protein
      • Protein or peptide: Ribosome biogenesis protein C8F11.04
      • Protein or peptide: Ribosome biogenesis protein ERB1
      • Protein or peptide: RNA helicase
      • Protein or peptide: Ribosome assembly factor mrt4
      • Protein or peptide: 60S ribosome subunit biogenesis protein NIP7
      • Protein or peptide: Nucleolar GTP-binding protein 1
      • Protein or peptide: Putative RNA-binding protein
      • Protein or peptide: Pescadillo homolog
      • Protein or peptide: Ribosome biogenesis protein NSA2 homolog
      • Protein or peptide: Putative GTP binding protein
      • Protein or peptide: 60S ribosomal protein l7-like protein
      • Protein or peptide: Eukaryotic translation initiation factor 6
      • Protein or peptide: DUF2423 domain-containing protein
      • Protein or peptide: RNA methyltransferase nop2-like protein
      • Protein or peptide: Ribosome biogenesis protein RLP24
      • Protein or peptide: Nucleolar protein 16
      • Protein or peptide: AdoMet-dependent rRNA methyltransferase SPB1
      • Protein or peptide: Nucleolar complex-associated protein 3
      • Protein or peptide: rRNA-processing protein EBP2
      • Protein or peptide: Putative 60S ribosomal protein
      • Protein or peptide: 60S ribosomal subunit-like protein
      • Protein or peptide: Putative NOC2 family protein
      • Protein or peptide: ATP-dependent RNA helicase DBP10
      • Protein or peptide: rRNA-processing protein
      • Protein or peptide: 60S ribosomal protein L3-like protein
      • Protein or peptide: 60S ribosomal protein L4-like protein
      • Protein or peptide: 60S ribosomal protein L6
      • Protein or peptide: 60S ribosomal protein L8
      • Protein or peptide: 60S ribosomal protein l9-like protein
      • Protein or peptide: 60S ribosomal protein L12-like protein
      • Protein or peptide: 60S ribosomal protein L13
      • Protein or peptide: 60S ribosomal protein L14-like protein
      • Protein or peptide: Ribosomal protein L15
      • Protein or peptide: 60S ribosomal protein L16-like protein
      • Protein or peptide: 60S ribosomal protein l17-like protein
      • Protein or peptide: Ribosomal protein L18-like protein
      • Protein or peptide: 60S ribosomal protein L20
      • Protein or peptide: 60S ribosomal protein l21-like protein
      • Protein or peptide: 60S ribosomal protein l23-like protein
      • Protein or peptide: 60S ribosomal protein L25-like protein
      • Protein or peptide: 60S ribosomal protein L26-like protein
      • Protein or peptide: Putative 60S ribosomal protein
      • Protein or peptide: 60S ribosomal protein L32-like protein
      • Protein or peptide: 60S ribosomal protein l33-like protein
      • Protein or peptide: dolichyl-diphosphooligosaccharide--protein glycotransferase
      • Protein or peptide: 60S ribosomal protein L36
      • Protein or peptide: Ribosomal protein L37
      • Protein or peptide: Ribosomal protein
  • Ligand: GUANOSINE-5'-TRIPHOSPHATE
  • Ligand: ZINC ION

+
Supramolecule #1: pre-60S ribosome

SupramoleculeName: pre-60S ribosome / type: complex / ID: 1 / Parent: 0 / Macromolecule list: #1-#51
Source (natural)Organism: Chaetomium thermophilum (fungus)

+
Supramolecule #2: ribosome

SupramoleculeName: ribosome / type: complex / ID: 2 / Parent: 1 / Macromolecule list: #1-#51
Source (natural)Organism: Chaetomium thermophilum (fungus)

+
Macromolecule #1: RNA (3341-MER)

MacromoleculeName: RNA (3341-MER) / type: rna / ID: 1 / Details: 25S rRNA / Number of copies: 1
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 1.0799771249999999 MDa
SequenceString: GGUUGACCUC GGAUCAGGUA GGAGGACCCG CUGAACUUAA GCAUAUCAAU AAGCGGAGGA AAAGAAACCA ACAGGGAUUG CCCUAGUAA CGGCGAGUGA AGCGGCAACA GCUCAAAUUU GAAAGCUGGC UUCGGCCCGC GUUGUAAUUU GGAGAGGAUG C UUUGGGCG ...String:
GGUUGACCUC GGAUCAGGUA GGAGGACCCG CUGAACUUAA GCAUAUCAAU AAGCGGAGGA AAAGAAACCA ACAGGGAUUG CCCUAGUAA CGGCGAGUGA AGCGGCAACA GCUCAAAUUU GAAAGCUGGC UUCGGCCCGC GUUGUAAUUU GGAGAGGAUG C UUUGGGCG AGGCUCCUUC UGAGUUCCCU GGAACGGGAC GCCACAGAGG GUGAGAGCCC CGUAUAGUUG GAAGCCAAGC CU GUGUAAA GCUCCUUCGA CGAGUCGAGU AGUUUGGGAA UGCUGCUCAA AAUGGGAGGU AAAUUUCUUC UAAAGCUAAA UAC CGGCCA GAGACCGAUA GCGCACAAGU AGAGUGAUCG AAAGAUGAAA AGCACUUUGA AAAGAGGGUU AAAUAGCACG UGAA AUUGU UGAAAGGGAA GCGCUUGUGA CCAGACUUGC GCCCGGCGGA UCAUCCGGUG UUCUCACCGG UGCACUCCGC CGGGC UCAG GCCAGCAUCG GUUCUGGCGG GGGGAUAAAG GCCCAGGGAA UGUGGCUCCU CCGGGAGUGU UAUAGCCCUG GGUGUA AUA CCCUCGCCGG GACCGAGGAC CGCGCUCUGC AAGGAUGCUG GCGUAAUGGU CACCAGCGAC CCGUCUUGAA ACACGGA CC AAGGAGUCAA GGUUUUGCGC GAGUGUUUGG GUGUAAAACC CGCACGCGUA AUGAAAGUGA ACGUAGGUGA GAGCUUCG G CGCAUCAUCG ACCGAUCCUG AUGUAUUCGG AUGGAUUUGA GUAGGAGCGU UAAGCCUUGG ACCCGAAAGA UGGUGAACU AUGCUUGGAU AGGGUGAAGC CAGAGGAAAC UCUGGUGGAG GCUCGCAGCG GUUCUGACGU GCAAAUCGAU CGUCAAAUCU GAGCAUGGG GGCGAAAGAC UAAUCGAACC AUCUAGUAGC UGGUUACCGC CGAAGUUUCC CUCAGGAUAG CAGUGUCGAC C UUCAGUUU UAUGAGGUAA AGCGAAUGAU UAGGGACUCG GGGGCGAUUU UUAGCCUUCA UCCAUUCUCA AACUUUAAAU AU GUAAGAA GCCCUUGUUA CUUAACUGAA CGUGGGCAUU CGAAUGUAUC GACACUAGUG GGCCAUUUUU GGUAAGCAGA ACU GGCGAU GCGGGAUGAA CCGAACGCGG GGUUAAGGUG CCGGAGUGGA CGCUCAUCAG ACACCACAAA AGGCGUUAGU ACAU CUUGA CAGCAGGACG GUGGCCAUGG AAGUCGGAAU CCGCUAAGGA CUGUGUAACA ACUCACCUGC CGAAUGUACU AGCCC UGAA AAUGGAUGGC GCUCAAGCGU CCCACCCAUA CCCCGCCCUC AGGGUAGAAA CGAUGCCCUG AGGAGUAGGC GGCCGU GGA GGUCAGUGAC GAAGCCUAGG GCGUGAGCCC GGGUCGAACG GCCUCUAGUG CAGAUCUUGG UGGUAGUAGC AAAUACU UC AAUGAGAACU UGAAGGACCG AAGUGGGGAA AGGUUCCAUG UGAACAGCGG UUGGACAUGG GUUAGUCGAU CCUAAGCC A UAGGGAAGUU CCGUUUCAAA GGGGCACUCG UGCCCCGUGU GGCGAAAGGG AAGCCGGUUA AUAUUCCGGC ACCUGGAUG UGGGUUUUGC GCGGCAACGC AACUGAACGC GGAGACGACG GCGGGGGCCC CGGGCAGAGU UCUCUUUUCU UCUUAACGGU CUAUCACCC UGGAAACAGU UUGUCUGGAG AUAGGGUUUA AUGGCCGGAA GAGCCCGACA CUUCUGUCGG GUCCGGUGCG C UCUCGACG UCCCUUGAAA AUCCGCGGGA GGGAAUAAUU CUCACGCCAG GUCGUACUCA UAACCGCAGC AGGUCCCCAA GG UGAACAG CCUCUGGUUG AUAGAACAAU GUAGAUAAGG GAAGUCGGCA AAAUAGAUCC GUAACUUCGG GAAAAGGAUU GGC UCUAAG GGUUGGGCAC GUUGGGCUUU GGGCGGACGC CCUGGGAGCA GAGGGCCUCU AGCCGGGCAA CCGGCCGGCG GCCC UCAGC ACCCGGGGUU GAAGCCCUUA GCAGGCUUCG GCCGUCCGGC GUGCGGUUAA CAACCAACUU AGAACUGGUA CGGAC AGGG GGAAUCUGAC UGUCUAAUUA AAACAUAGCA UUGCGAUGGC CAGAAAGUGG UGUUGACGCA AUGUGAUUUC UGCCCA GUG CUCUGAAUGU CAAAGUGAAG AAAUUCAACC AAGCGCGGGU AAACGGCGGG AGUAACUAUG ACUCUCUUAA GGUAGCC AA AUGCCUCGUC AUCUAAUUAG UGACGCGCAU GAAUGGAUUA ACGAGAUUCC CACUGUCCCU AUCUACUAUC UAGCGAAA C CACAGCCAAG GGAACGGGCU UGGCAAAAUC AGCGGGGAAA GAAGACCCUG UUGAGCUUGA CUCUAGUUUG ACAUUGUGA AAAGACAUAG GAGGUGUAGA AUAGGUGGGA GCUUCGGCGC CAGUGAAAUA CCACUACUCC UAUUGUUUUU UUACUUAUUC AAUGAAGCG GGGCUGGACU UGCGUCCAAC UUCUGGAGUU AAGGUCCUUC GCGGGCCGAC CCGGGUUGAA GACAUUGUCA G GUGGGGAG UUUGGCUGGG GCGGCACAUC UGUUAAACCA UAACGCAGGU GUCCUAAGGG GGGCUCAUGG AGAACAGAAA UC UCCAGUA GAACAAAAGG GUAAAAGUCC CCUUGAUUUU GAUUUUCAGU GUGAAUACAA ACCAUGAAAG UGUGGCCUAU CGA UCCUUU AGUCCCUCGA AAUUUGAGGC UAGAGGUGCC AGAAAAGUUA CCACAGGGAU AACUGGCUUG UGGCGGCCAA GCGU UCAUA GCGACGUCGC UUUUUGAUCC UUCGAUGUCG GCUCUUCCUA UCAUACCGAA GCAGAAUUCG GUAAGCGUUG GAUUG UUCA CCCACUAAUA GGGAACGUGA GCUGGGUUUA GACCGUCGUG AGACAGGUUA GUUUUACCCU ACUGAUGAAC UCGUCG CAA UGGUAAUUCA GCUUAGUACG AGAGGAACCG CUGAUUCAGA UAAUUGGUUU UUGCGGUUGU CCGACCGGGC AGUGCCG CG AAGCUACCAU CUGCUGGAUA AUGGCUGAAC GCCUCUAAGU CAGAAUCCAU GCCAGAACGC GACGAUACUA CCCGCACG U UGUAGACGUA UAAGAAUAGG CUCCGGCCUC GUAUCCUAGC AGGCGAUUCC UCCGCCGGCC UCGAAGUGGC CGUCGGUAA UUCGCGUAUU GCAAUUUAGA CACGCGCGGG AUCAAAUCCU UUGCAGACGA CUUAGAUGUG CGAAAGGGUC CUGUAAGCAG UAGAGUAGC CUUGUUGUUA CGAUCUGCUG AGGGUAAGCC CUCCUUCGCC UAGAUUUCCC AG

+
Macromolecule #2: RNA (319-MER)

MacromoleculeName: RNA (319-MER) / type: rna / ID: 2 / Details: 5.8S rRNA / Number of copies: 1
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 102.60743 KDa
SequenceString: AAACUUUCAA CAACGGAUCU CUUGGUUCUG GCAUCGAUGA AGAACGCAGC GAAAUGCGAU AAGUAAUGUG AAUUGCAGAA UUCCGUGAA UCAUCGAAUC UUUGAACGCA CAUUGCGCCC GCCGGUAUUC CGGCGGGCAU GCCUGUUCGA GCGUCAUUUC A ACCAUCAA ...String:
AAACUUUCAA CAACGGAUCU CUUGGUUCUG GCAUCGAUGA AGAACGCAGC GAAAUGCGAU AAGUAAUGUG AAUUGCAGAA UUCCGUGAA UCAUCGAAUC UUUGAACGCA CAUUGCGCCC GCCGGUAUUC CGGCGGGCAU GCCUGUUCGA GCGUCAUUUC A ACCAUCAA GCCCUGGGCU UGUGUUGGGG ACCCGCGGCU GCUCGCGGGC CCUGAAAAGC AGUGGCGGGC UCGCUAGUCA CA CCGAGCG UAGUAGAACU UCUAUUCGAU CUCGCUCAGG GCGUGCGGCG GGUGCCAGCC GUAAAACCCC AGCUUCUUCU AA

+
Macromolecule #3: Brix domain-containing protein

MacromoleculeName: Brix domain-containing protein / type: protein_or_peptide / ID: 3 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 36.48202 KDa
SequenceString: MAAVYKTIAK VTGSKEDKDK EDRSNIIAER KNKQRVLVLS SRGVTYRHRH LLNDLASMLP HGRKDAKFDT KSRLYELCEL AELYNCNNV LFFEARKGKD LYMWFSKVPN GPTVKFYAQN LHTMEELHFQ GNCLKGSRPI LSFDAAFEQE PYLKVIKELF L HTFGVPQG ...String:
MAAVYKTIAK VTGSKEDKDK EDRSNIIAER KNKQRVLVLS SRGVTYRHRH LLNDLASMLP HGRKDAKFDT KSRLYELCEL AELYNCNNV LFFEARKGKD LYMWFSKVPN GPTVKFYAQN LHTMEELHFQ GNCLKGSRPI LSFDAAFEQE PYLKVIKELF L HTFGVPQG HKKSKPFIDH VLSFSVADGK IWVRNYEIRE VEKVKGEADK REEGETEKPK AAKPGSKDTD INLIEIGPRF VL TPIIIQE GSFGGPILYE NKRFISPNKI RAELRKAKAA RHHARMEQQR DLLARKRQLG LDESTPKKKD DLDTRELFA

UniProtKB: Brix domain-containing protein

+
Macromolecule #4: Ribosome biogenesis protein C8F11.04

MacromoleculeName: Ribosome biogenesis protein C8F11.04 / type: protein_or_peptide / ID: 4 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 43.700527 KDa
SequenceString: MAPSTAVAKK ETDAVIPVDP DQTLKACKAL LAHIKKAAAA PRPDGKQNLL ADEESTVAET PIWLTLTTKK HIHDSHRLQP GKIILPHPL NTSEEISVCL ITADPQRFYK NAVADEFPED LRAKIGRVID ISHLKAKFKA YEAQRKLFSE HDVFLADTRI I NRLPKALG ...String:
MAPSTAVAKK ETDAVIPVDP DQTLKACKAL LAHIKKAAAA PRPDGKQNLL ADEESTVAET PIWLTLTTKK HIHDSHRLQP GKIILPHPL NTSEEISVCL ITADPQRFYK NAVADEFPED LRAKIGRVID ISHLKAKFKA YEAQRKLFSE HDVFLADTRI I NRLPKALG KTFYKTTTKR PIPVVLMAQR EKVNGKRVPA PKGKKEKRDP LENANARPIP EIVAEIRKAI GAALVHLSPS TN TAIKVGY ANWEPEKLAA NIETVIRELV ERFVPQKWQN VRNFYVKGPE TAALPIYQTD ELWLDESKVV PDGQEPARAL PGK REKANI GKKRKPLEDA SQPALEETGK DERPKKKAKK TLPESNDDKL DKAIAERKEQ LKKQKAAAKK VAADI

UniProtKB: Uncharacterized protein

+
Macromolecule #5: Ribosome biogenesis protein ERB1

MacromoleculeName: Ribosome biogenesis protein ERB1 / type: protein_or_peptide / ID: 5 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 90.997984 KDa
SequenceString: MGSKIVEKKR KSRDSDSESD NELGDGLFDG VLSQSEDEED YIPSSEVDED DDDDADESAS EDSDDSNDSE DDEVEEDDEA LLSDEIPSE GESEKDQDLA ESKESKQDQD KEPSEPEILE PFVDPPRKED EELEDRNYRI EKDANGGIRY VYDEIDPVYD (SEP)DD(TPO) ...String:
MGSKIVEKKR KSRDSDSESD NELGDGLFDG VLSQSEDEED YIPSSEVDED DDDDADESAS EDSDDSNDSE DDEVEEDDEA LLSDEIPSE GESEKDQDLA ESKESKQDQD KEPSEPEILE PFVDPPRKED EELEDRNYRI EKDANGGIRY VYDEIDPVYD (SEP)DD(TPO)DYNVP VNTIGNIPLS FYDSYPHIGY DINGKKIMRP ATGDALQNLL DSIEVPEGWT GLTDPNTGKP LNL SRDELE LIRKVQQGLI PDDVEDPYPD TVEWFTSVEE KMPLSAAPEP KRRFIPSKNE AKQIMKLVRA IREGRILPYK PPEE REREE LEKEEEFYDL WQNEEPQPPN PMHIPAPKLP PPGYDLSYNP PPEYLPTKEE REEWEKMDPE DREKDYLPTK YDSLR KVPA WGNFVKERFE RCMDLYLAPR VRKNRLNIDP NSLLPKLPSP DELKPFPTVQ QTIFRGHEGR VRSVAIDPTG VALATG GDD GTVRVWELLT GRQVWSVKLN GDEAVNTVRW RPTKDTFILA AAAGEDIFLM IPTHPSVTPA LDQASRDILN AGFGHAT NG KQQANLPPGK EPPGKWARPG TRLEDEGVLL RITVRSTIKA ISWHRRGDHF ATVSPSGQRS SVAIHTLSKH LTQIPFRK L NGLAQTASFH PLRPLFFVAT QRSIRCYDLQ KLELVKIVQP GAKWISSFDV HPGGDNLVVG SYDKRLLWHD LDLSNRPYK TMRFHTEAIR AVRFHKGGLP LFADASDDGS LQIFHGKVPN DQLENPTIVP VKMLKGHKVV NKLGVLDIDW HPREPWCVSA GADGTARLW M

UniProtKB: Ribosome biogenesis protein ERB1

+
Macromolecule #6: RNA helicase

MacromoleculeName: RNA helicase / type: protein_or_peptide / ID: 6 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 66.830867 KDa
SequenceString: MASESSKKRK FKDSKGPKPD EAVAKPSKFK KLKRDPTPEE RETSDSESGN SDGQHEPDQV DSDGEDAVSD DGSFDEKVAH QDEDGSRPE NGTDLEDVPK NDNLLPPPTN AQEFSELNLS EKTTKAIAEM GFTKMTEIQR RAIPPALAGK DVLGAAKTGS G KTLAFLIP ...String:
MASESSKKRK FKDSKGPKPD EAVAKPSKFK KLKRDPTPEE RETSDSESGN SDGQHEPDQV DSDGEDAVSD DGSFDEKVAH QDEDGSRPE NGTDLEDVPK NDNLLPPPTN AQEFSELNLS EKTTKAIAEM GFTKMTEIQR RAIPPALAGK DVLGAAKTGS G KTLAFLIP AVEMLSSLRF KPRNGTGAIV VTPTRELALQ IFGVARELMK YHSQTYGVVI GGANRRAEAE KLGKGVNLLI AT PGRLLDH LQNTPFVFKN LKSLIIDEAD RILEIGFEDE MRQIVKILPK EDRQTMLFSA TQTTKVEDLA RISLRPGPLY INV DEEKKY STVEGLEQGY VVVEADKRFL LLFSFLKKMA KKKIIVFFSS CNSVKYYSEL LQYIDLPVLD LHGKQKQQKR TNTF FEFCN AKSGTLICTD VAARGLDIPQ VDWIVQFDPP DDPRDYIHRV GRTARGNNGK GRSLLFLQPC ELGFLAHLKA AKVPV VEYD FPKNKILNVQ SQLEKLISTN YYLNQSAKEG YRSYIHAYAS HSLRSVFDVH KLDLVKVAKS FGFSTPPRVD ITLSAS LSR DKKPQGRRAY GSQPRQGGRY KKVGDIPDPQ PNTFG

UniProtKB: ATP-dependent RNA helicase

+
Macromolecule #7: Ribosome assembly factor mrt4

MacromoleculeName: Ribosome assembly factor mrt4 / type: protein_or_peptide / ID: 7 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 30.551549 KDa
SequenceString: MPKSKRARVY HLIQVNKKGR EAKERLFSNI RETIPKYQHC FVFSVDNMRN NYLKDVRHEL NDCRIFFGKT KLMARALGTT PEEEQADGL HRLTRYLTGT VGLLFTNRDP ADIESYFSNL SQVDFARAGT VAPRTVTVPT GIVYSTGGEV PPEHDVPVSH T LEPELRRL ...String:
MPKSKRARVY HLIQVNKKGR EAKERLFSNI RETIPKYQHC FVFSVDNMRN NYLKDVRHEL NDCRIFFGKT KLMARALGTT PEEEQADGL HRLTRYLTGT VGLLFTNRDP ADIESYFSNL SQVDFARAGT VAPRTVTVPT GIVYSTGGEV PPEHDVPVSH T LEPELRRL GMPVRMIKGK VCLGDEKGEA SEGYTICKEG EVLDSRQTRL LKLFSICLSE FKVSLLGYWN SASGEVTELE AG KTRPKRE GNRRQAMNGD EIDEDQSSDE DSD

UniProtKB: Large ribosomal subunit protein uL10

+
Macromolecule #8: 60S ribosome subunit biogenesis protein NIP7

MacromoleculeName: 60S ribosome subunit biogenesis protein NIP7 / type: protein_or_peptide / ID: 8 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 20.685982 KDa
SequenceString:
MRPLTDQEMK IVLDKLANYM TDLKSLIAPL EDGDRYVFRM QKDRVYYVKL SIANIATCVA RDKLLSLGTC LGKMTKSGKF RLHITALPI LAQNARYKIW VKDNGAQPFL YGSNIVKAHV GRWTEDCPEH SGCVVYNMAD IPLGFGVTAR STAEARRLDP T GIVCFRQA DCGEYLRDED TLFTGA

UniProtKB: 60S ribosome subunit biogenesis protein NIP7

+
Macromolecule #9: Nucleolar GTP-binding protein 1

MacromoleculeName: Nucleolar GTP-binding protein 1 / type: protein_or_peptide / ID: 9 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 75.621508 KDa
SequenceString: MTGWKDIPPV PTAQEFIDIV LSRTQRRLPT QIRPGFKISR IRAFYTRKVK FTQETCSEKF GAIISSFPVL SDQHPFHRDL MNILYDADH FKVALGQIST AKNLIETISR DYVRLLKYAQ SLYQCKQLKR AALGRMATLI KRLKDPLIYL DQVRQHLARL P DINPTTRT ...String:
MTGWKDIPPV PTAQEFIDIV LSRTQRRLPT QIRPGFKISR IRAFYTRKVK FTQETCSEKF GAIISSFPVL SDQHPFHRDL MNILYDADH FKVALGQIST AKNLIETISR DYVRLLKYAQ SLYQCKQLKR AALGRMATLI KRLKDPLIYL DQVRQHLARL P DINPTTRT LLVAGFPNVG KSSFVRSVTR ADTPVEPYAF TTKSLFVGHL DYKYLRYQVI DTPGILDHPL EEMNTIEMQS VT ALAHLRA AVLYFMDISE QCGFSLKAQI NLFKSIKPLF ANKMVFIVLN KMDIKKFEEL DPEMQQEIND LTKSGEVEIL RAS CATQEG VQEVKNHVCE RLLVERVSQK LKAGTHSNGN IGTRLQEVMA RIHVATPMDG TTRETFIPEA VKNLKKYDKN DPNR RVLAR DIEEANGGAG VFNVDLRKDW ILENPEWKYD KIPEIFDGKN VYDYIDPDID AKLQALEEEE ERLEKEGFYD EDDDL PDEE EEEILQKAEY IREQHALIRN EAKMRKSLKN RAIIPRKAVK KPLSQLEDHL DQLGVDTEAI GLRARAQTAQ SSRGRS LVR SRGTTADPDA MDIDDGAASA KERLARSRSR ARSVAATNRL QDGVQGTTLR SKAERQAKLA QRKMNRMARQ GEADRHI HA SMPKHLFSGK RTIGKTDRR

UniProtKB: Nucleolar GTP-binding protein 1

+
Macromolecule #10: Putative RNA-binding protein

MacromoleculeName: Putative RNA-binding protein / type: protein_or_peptide / ID: 10 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 45.884414 KDa
SequenceString: MAAELRKKKS KSAVADADAA ISKKEKATKV TKATPKAEKR KAPEEASPVA IKKQKADKDA VVKKAAVAAE DKIAEKPVKS VLKKETSAK AKEAAKPKKK QEKVEEEEEE ALENADAAFG SDEESELDEQ TKALMDTLDD GEESDEDESK QVSTFKKGQD V GKIPTPKK ...String:
MAAELRKKKS KSAVADADAA ISKKEKATKV TKATPKAEKR KAPEEASPVA IKKQKADKDA VVKKAAVAAE DKIAEKPVKS VLKKETSAK AKEAAKPKKK QEKVEEEEEE ALENADAAFG SDEESELDEQ TKALMDTLDD GEESDEDESK QVSTFKKGQD V GKIPTPKK APQKQTNGDS KPAGDSQPGV MYIARLPHGF YEHELRGYFS QFGEITRLRV VRNKKTGASR HRAFIEFADA EV ADIAART MDKYLLFGHI LTCKIVPPAQ VHPDLFKGAN RRFKVVPWNK MAGRQLERPL SESQWQVKVA KEEQRRAARA EKL KEMGYE FEAPALKVPK AKPVLENGEE EKKAIETAPA PAVEEKESKE VAKRQAEEEV EEKAPAPKTK KVKEDKPAKE AATI SAPKK GKKSKKTKS

UniProtKB: Putative RNA-binding protein

+
Macromolecule #11: Pescadillo homolog

MacromoleculeName: Pescadillo homolog / type: protein_or_peptide / ID: 11 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 77.16725 KDa
SequenceString: MGKAKKKGKS GAARNYMTRT QAVKKLQLSL PDFRKLCIWK GIYPREPRDR RKVNKSATAS TTFYYTKDIQ YLLHEPLLQK FREQKALEK KISRALGRGD VSNAARLERN ANLPEKTGKP RYTLNHIIRE RYPTFQDALR DLDDCLSMLF LFANLPSTTA V PAKMIARC ...String:
MGKAKKKGKS GAARNYMTRT QAVKKLQLSL PDFRKLCIWK GIYPREPRDR RKVNKSATAS TTFYYTKDIQ YLLHEPLLQK FREQKALEK KISRALGRGD VSNAARLERN ANLPEKTGKP RYTLNHIIRE RYPTFQDALR DLDDCLSMLF LFANLPSTTA V PAKMIARC ERLCHEFQHY LIVTHSLRKS FLSIKGIYYQ ANIQGEDILW LVPYKFNQRI VGDVDFRIMG TFVEFYMTLL GF VNYRLYT SIGLKYPPKF DQVKDDQGAE LAAFSLEGLN LASQNGEQKA ITNGEEHGPD PKVQAEVDKL VAKLREEEQQ ANG DKTDEK GEENEGDDKP SDAIDKFEPV APGGDVLPQP SYSSSDPSQL FANFTFFLSR ETPRQPLEFI LRAFGCKRIG WDAV LGEGA FTTDESDPRI THQIIDRPVI RAAVSEDGDG EDNQTSQKLA PNGRYPGRIY VQPQWVWDSI NDEELKPPEL YAPGA QLPP HLSPFVKPTQ GQYDPTKPLE EQQTEAEALE AELEDAQAQQ EGSDEESGSE VENDMSVASD EEDEQEDDFG GFSDED EEQ SDEGSEEGDE EEDDDEEEEA TLERQRELEA ELAGKAVSKG KPLDPKVKAK LEAKKALERK KKQEAEELER AKGMLSK KK RKLFEQMQYS NAKKNAEDAK LRAKRRRIEK EMAAKKA

UniProtKB: Pescadillo homolog

+
Macromolecule #12: Ribosome biogenesis protein NSA2 homolog

MacromoleculeName: Ribosome biogenesis protein NSA2 homolog / type: protein_or_peptide / ID: 12 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 29.72458 KDa
SequenceString: MPQNEYIERH RKLHGRRLDA EERARKKAAR EGHKNSENAQ NLRGLRAKLY AKQRHAQKIQ MRKAIKQHEE RNVKGRPAEK EPSDPIPSY LLDRANPTTA KALSSQIKNK RAEKAARFSV PIPKVRGISE EEMFKVVKTG KKTHKKGWKR IVTKPTFVGP D FTRRPVKY ...String:
MPQNEYIERH RKLHGRRLDA EERARKKAAR EGHKNSENAQ NLRGLRAKLY AKQRHAQKIQ MRKAIKQHEE RNVKGRPAEK EPSDPIPSY LLDRANPTTA KALSSQIKNK RAEKAARFSV PIPKVRGISE EEMFKVVKTG KKTHKKGWKR IVTKPTFVGP D FTRRPVKY ERFIRPMGLR YKKANVTHPT LNVTVQLPIL SVKKNPSNPL YTQLGVLTKG TIIEVNVSDL GIVTASGKIA WG RYAQITN NPENDGCVNA VLLV

UniProtKB: Ribosome biogenesis protein NSA2 homolog

+
Macromolecule #13: Putative GTP binding protein

MacromoleculeName: Putative GTP binding protein / type: protein_or_peptide / ID: 13 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 61.523926 KDa
SequenceString: MAGTINKPKK PTSKRKTTRL RAKISKRAAE KKRKERKLAR KNPEWRSKLK KDPGIPNLFP YKERLLQQRE EERIRRKEEL LRKKELAKA AKTGADGDNK DDEQMQEDDE HMIREEELDL DDAMDEDGSD VDESNPLAAL VRSARKAAEE YEKELQSGSE M DEDDEDDS ...String:
MAGTINKPKK PTSKRKTTRL RAKISKRAAE KKRKERKLAR KNPEWRSKLK KDPGIPNLFP YKERLLQQRE EERIRRKEEL LRKKELAKA AKTGADGDNK DDEQMQEDDE HMIREEELDL DDAMDEDGSD VDESNPLAAL VRSARKAAEE YEKELQSGSE M DEDDEDDS DDASDAGSDA GVITEVHGGA TSRKAYDKVF KQVVEQADVI LYVLDARDPE GTRSHDVEQA VMAAAGGGKR LM LILNKVD LVPPPVLKGW LTYLRRFFPT LPLRASNPAP NARTFSHRDI TVQSTSAALF RALKAYAAAR NLKRAIAVGV IGY PNVGKS SVINALLSRL PGSARGGRTP CPAGAEAGVT TAIRAVKIDS KLTLLDSPGI VFPSTASSQT FIPKNPVEAH AHLV LLNAI PPKQIEDPVP AVTLLLKRLS ATPELMDRLM QVYDIPPLLK DPSQGGDATM DFLVQVARKR GRLGRGGVPN IQAAA MTVV TDWRDGRIQG WTEPPKIAVE GVKEGNEGKV VRKIADQEVA PDQKIIVTEW AKEFKLAGLW GDEEQTEEGD KMEA

UniProtKB: Putative GTP binding protein

+
Macromolecule #14: 60S ribosomal protein l7-like protein

MacromoleculeName: 60S ribosomal protein l7-like protein / type: protein_or_peptide / ID: 14 / Number of copies: 2 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 28.821816 KDa
SequenceString: MSSTTVPTQN DILVPETLLK KRKSQEKARA ERAAALEKRK QANKEKRQVI FKRAEKYVKE YREQEREKIR LARIAKQQGS FHIPAEAKL VFVIRIKGIN KIPPKPRKIL QLLRLRQINN GVFVKVTKAT AEMIKIVEPW VAYGYPNLKS VRELIYKRGY G KVNGQRIP ...String:
MSSTTVPTQN DILVPETLLK KRKSQEKARA ERAAALEKRK QANKEKRQVI FKRAEKYVKE YREQEREKIR LARIAKQQGS FHIPAEAKL VFVIRIKGIN KIPPKPRKIL QLLRLRQINN GVFVKVTKAT AEMIKIVEPW VAYGYPNLKS VRELIYKRGY G KVNGQRIP LTDNAIIEEN LGKYGIICIE DLIHEIFTVG PNFKQAANFL WPFKLSNPNG GFRPRKFKHF IEGGDLGNRE EH INALIRA MN

UniProtKB: 60S ribosomal protein l7-like protein

+
Macromolecule #15: Eukaryotic translation initiation factor 6

MacromoleculeName: Eukaryotic translation initiation factor 6 / type: protein_or_peptide / ID: 15 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 26.46884 KDa
SequenceString: MAVRAQFENS NEVGVFATLT NSYCLVALGA SENFYSVFEA ELQDVIPICR TTIAGTRIIG RLTAGNRKGL LVPTTTTDQE LQHLRNSLP DDIRIQRIEE RLSALGNVIV CNDHTALIHP DLERETEEII ADVLGVEVFR QTIADHVLVG SYMALSNQGG L VHPKTSIQ ...String:
MAVRAQFENS NEVGVFATLT NSYCLVALGA SENFYSVFEA ELQDVIPICR TTIAGTRIIG RLTAGNRKGL LVPTTTTDQE LQHLRNSLP DDIRIQRIEE RLSALGNVIV CNDHTALIHP DLERETEEII ADVLGVEVFR QTIADHVLVG SYMALSNQGG L VHPKTSIQ DQDELSSLLG VPLVAGSVNR GSNVIGGGMV VNDWLAVTGL DTTAPELSVI ESVFRLGEGA GPGAINTSMK NT IVESFY

UniProtKB: Eukaryotic translation initiation factor 6

+
Macromolecule #16: DUF2423 domain-containing protein

MacromoleculeName: DUF2423 domain-containing protein / type: protein_or_peptide / ID: 16 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 13.262389 KDa
SequenceString:
MAKSARASRI KENHQRFKKN IAGPVEAARL ERLSAKLMAI AQAPKPDIEM KEESEATAEQ PKESTQTKDD TAMDVDGAKP TLSGVKSGK SIGRKDSRKR RGKKSSIVFP MKGPKRNNLK K

UniProtKB: DUF2423 domain-containing protein

+
Macromolecule #17: RNA methyltransferase nop2-like protein

MacromoleculeName: RNA methyltransferase nop2-like protein / type: protein_or_peptide / ID: 17 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 83.658305 KDa
SequenceString: MGTKRRLKHQ GPPEPLPEEH FLKLKRKKGL PVEDTTPAEA PSAKKRRTST KEKETKPHKA TTKQTNGTKK APGAPSNGEK ASKPKPKKL PESEPESDVE MDDEFGGSDL DDVSISGSDT SEPKLGSDFM ASDDDSVYDS EQDEGPGKKT KFVFSDDEDE D EDEIEQKL ...String:
MGTKRRLKHQ GPPEPLPEEH FLKLKRKKGL PVEDTTPAEA PSAKKRRTST KEKETKPHKA TTKQTNGTKK APGAPSNGEK ASKPKPKKL PESEPESDVE MDDEFGGSDL DDVSISGSDT SEPKLGSDFM ASDDDSVYDS EQDEGPGKKT KFVFSDDEDE D EDEIEQKL TAANIEGLSR KLDEQLAREA EENEEEIRNQ ALQTNIDGDK PKILEGNEED ELAAKTNGLL APDLQMLRTR IT DTIRVLE DFQNLAEEGR SRAEYTNQLL KDICAYYGYN EYLAEKLLNL FPPREAFAFF EANETPRPVV IRTNTLRTHR RDL AQALIN RGVTLEPVGK WSKVGLQVFD SKVPLGATPE YLAGHYILQA ASSFLPVMAL CPQENERCLD MAAAPGGKTT HMAA LMKNT GVIFANDPSK SRAKGLIGNI HRLGVRNTIV CNYDAREFPR VIGGFDRVLL DAPCSGTGVI CKDPSVKTNR DAKDF MQLP HTQKQLLLAA IDSCNHASKT GGYIVYSTCS VCVEENEEVV NYALSRRPNV KLVETGLPFG KEGFTSYMGK TFHPSL KLT RRFYPHLYNV DGFFVAKFKK IGPTPPNAVL ANGKKDQPKP ANATGEEEII DKTPIGAEEQ KKEDDFGGWD DEEDKVY ME RAKRNAMRRR GLDPRALKKP QGKKDDKDGE ASKEGANGET KKAATEQKKT EEKKTEEKKA EEKKAEKAKE EKPKAKAE K TTEKAKEGAK EKVKEQNKAN DKKEKAKGKK

UniProtKB: Nucleolar protein 2

+
Macromolecule #18: Ribosome biogenesis protein RLP24

MacromoleculeName: Ribosome biogenesis protein RLP24 / type: protein_or_peptide / ID: 18 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 26.434312 KDa
SequenceString: MRIENCFFCG RPAWPSKGIT FMRNDGKAFR FCRSKCHKNF KMKRNPRKLK WTKAYRKNAG KEMVVDSTLQ FAARRNVPVR YNRELWQKT LKAMERISEI RARRERVFYK KRMAGKRARE VAAARKLVAE NEHLLPRLRG SEKRRLAELA AERGVDVEEL E REELAKLA ...String:
MRIENCFFCG RPAWPSKGIT FMRNDGKAFR FCRSKCHKNF KMKRNPRKLK WTKAYRKNAG KEMVVDSTLQ FAARRNVPVR YNRELWQKT LKAMERISEI RARRERVFYK KRMAGKRARE VAAARKLVAE NEHLLPRLRG SEKRRLAELA AERGVDVEEL E REELAKLA SKKKSKAFGG EVRRVRVRTD GGVEEITESF GGKNVDEEMD DDDHDDSDRD DDDMDTD

UniProtKB: Ribosome biogenesis protein RLP24

+
Macromolecule #19: Nucleolar protein 16

MacromoleculeName: Nucleolar protein 16 / type: protein_or_peptide / ID: 19 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 26.960477 KDa
SequenceString: MGRELQKRKR RSSRPTIRMP NRRKKALNPA GNNIIAKSWN KKETLSQNYT RFGLVAKLGK ATGGTAPGNK ALLKDLNDPL AIKSGDQGL IKVSEVKVER DEQGRIKRVV RDNNPLNDPL NDLDSDSESD AVPQQQQQEQ PVLNNHIRQH DLELENVAAD V DDESKPEV ...String:
MGRELQKRKR RSSRPTIRMP NRRKKALNPA GNNIIAKSWN KKETLSQNYT RFGLVAKLGK ATGGTAPGNK ALLKDLNDPL AIKSGDQGL IKVSEVKVER DEQGRIKRVV RDNNPLNDPL NDLDSDSESD AVPQQQQQEQ PVLNNHIRQH DLELENVAAD V DDESKPEV LRALEREATR PVEKTVRHQS EREREWLQRL VDKHGDDVAA MARDRKLNPY QQTASDIKRR LKKAGLLSA

UniProtKB: Nucleolar protein 16

+
Macromolecule #20: AdoMet-dependent rRNA methyltransferase SPB1

MacromoleculeName: AdoMet-dependent rRNA methyltransferase SPB1 / type: protein_or_peptide / ID: 20 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 95.510961 KDa
SequenceString: MAKTQKKHGK GRLDKWYKLA KEKGYRARAA FKLIQLNKKY GFLEKAKVVL DLCAAPGSWC QVCAETMPKD SLIIGVDLAP IKPIPKVIT FQSDITTEKC RATIRSHLKT WKADVVLHDG APNVGTAWVQ DSYNQAELAL HSLKLATEFL IEGGTFVTKV F RSKDYNKL ...String:
MAKTQKKHGK GRLDKWYKLA KEKGYRARAA FKLIQLNKKY GFLEKAKVVL DLCAAPGSWC QVCAETMPKD SLIIGVDLAP IKPIPKVIT FQSDITTEKC RATIRSHLKT WKADVVLHDG APNVGTAWVQ DSYNQAELAL HSLKLATEFL IEGGTFVTKV F RSKDYNKL LWVCNQLFTK VEATKPPSSR NVSAEIFVVC RGFKAPKRID PRLLDPRSIF EDLADPAPNN EARVYNPEQK KR KREGYEE GDYTQYKETS AIEFINTTDP IAILANYNKL SFEQPPNGDV ALAALEKLPE TTKEIRACCD DLKVLGKKDF RLL LKWRLR VREIFGLPSK KTAKQQPLVE EEAKVEPMDE ELKIQEELER IKEKERAKKK RERRKENERK HKEIVRMQMH MTTP MDIGM EQEGPRGDGA FFRLKEIDQT DALRRIAKGK MAMLTEAEQA DRDSGIGLSP DTDDDSDEDG DQLERELDAM YEHYK ERKA SQDAKYRAKR ARQEVDDEEW EGLSADEKGS DVDMDDDDSE RLEEDSSDEE AWSDDEELDT SKPLIKDLSG APQDGS GLS KRARGFFSQD VFQKIPGLLD TVSESEEEQD SDDNDGIPSI QEQKRMQKEK KEKEAKKQDD DDFEVVKEHD SDDDWEE KE KKSKDGRPNI DIITAEAMTL AHQLATGEKT KADLIDEGYN KYAFKQKEGL PDWFLEDEAK HDKPIKPITK EAAQAIKE K LRALNARPIK KVAEARARRK LRQAKKLEKL KKKADLLVDE EGMSEKEKAT TIAKMLSAAA RKKRRPQVKV VKATGANRG IKGRPKGVKG RYKMVDGRMK KEMRALKRLA KKKR

UniProtKB: Uncharacterized protein

+
Macromolecule #21: Nucleolar complex-associated protein 3

MacromoleculeName: Nucleolar complex-associated protein 3 / type: protein_or_peptide / ID: 21 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 77.953883 KDa
SequenceString: MATRPLKRRK VTPPRDDGQD AAEREAKIQK AFLKNAASWD LEEAWESRPR KGKKKDKKKD EERPGRLPIR TEQGTWQVQD DVESIPSDA EWLDSDGELA VEQQLEPVAP APAPEPPKIS EKEQIRQAQE ELAKIATQLN ENPEEYPGHF KALARIGETP I LAIQKLCI ...String:
MATRPLKRRK VTPPRDDGQD AAEREAKIQK AFLKNAASWD LEEAWESRPR KGKKKDKKKD EERPGRLPIR TEQGTWQVQD DVESIPSDA EWLDSDGELA VEQQLEPVAP APAPEPPKIS EKEQIRQAQE ELAKIATQLN ENPEEYPGHF KALARIGETP I LAIQKLCI VTQMAVYKDV IPGYRIRPLG EDAVNEKVSK EVKRLRTYEQ ALVAGYHGYL KTLATYAASS IPEDRKGEPI SS IAFTCAC ELVNAVPHFN FRGDLLRILV KKLSTRKIDR DFVKCREALE KLFQDDEEGN ASQEAVSLLS KMMKAREYRV DES VLNLFL HLRLLSEFVG KGSRDTVIRP GDDRPIGKKP KKKWEFRTKK QRKLLKAEKE AQKVMEQADA TVSHEERERI QSEI LKMVF ATYFRILKAR VPHLMGAVLE GLAKYAHLIN QDFFGDLLEA LKDLIRDTDR LEEEDGPDSS QDDDQGVSVV RDTSR ESLL CTVTAFALLE GQDAHNARSD LHLDLSFFIT NLYRSLLSLS LNPDLELGAQ SLHLSDPNDT SSGSTENSRR NNKINL QTT TVLLLRCLTS VLLPPWNIRS VPPIRLAAFC KQLMTLALQV PEKSSQAILG LLQDVVHTHG RKVAALWNTE ERKGDGT YK PLSETVEGSN PFTTTIWEGE LLRKHYCPKV REGLKAMEKE LRSIPS

UniProtKB: Nucleolar complex-associated protein 3

+
Macromolecule #22: rRNA-processing protein EBP2

MacromoleculeName: rRNA-processing protein EBP2 / type: protein_or_peptide / ID: 22 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 50.255562 KDa
SequenceString: MAKKGATQSP KAGSKPNSQT GDAQSKNQKA DRRKSNEPVV EKVAEKEEQR EEETEESEED ESEDEQLQIR ANGNNESDSE EDSDENSED EDESDDDSGD EHPTHHIDFE AIDDSDSESE LDSDEENDKK QDSNKAQNGM SEDKMDVDKD GEDKSGDEED E EEEIDVEE ...String:
MAKKGATQSP KAGSKPNSQT GDAQSKNQKA DRRKSNEPVV EKVAEKEEQR EEETEESEED ESEDEQLQIR ANGNNESDSE EDSDENSED EDESDDDSGD EHPTHHIDFE AIDDSDSESE LDSDEENDKK QDSNKAQNGM SEDKMDVDKD GEDKSGDEED E EEEIDVEE LEPEDEEDEE QIAAGTRTRQ TINNKEGLLT ALRRIQLDIN PKTTPFSFHQ SVVASKRTED SIPQIEDDLQ RE LAFMNQA LEAARLGRSL LRKEGVPFTR PTDYFAEMVR TDATMEKVKQ KLIEEATAKK AAAEARKQRD LKKFGKAVQV QKQ LERAKQ KREALDKINQ LKRKRAEGGS AALGATEADD PFDVAVDNEL SRDSKPKKRR ADGDHPVPNP KRQKKNAKYG FGGK KRGSK SGDAISSGDL SGFSVKRMKY GGGAGGGKKK ANRPGKARRK AAAAKR

UniProtKB: rRNA processing protein

+
Macromolecule #23: Putative 60S ribosomal protein

MacromoleculeName: Putative 60S ribosomal protein / type: protein_or_peptide / ID: 23 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 15.960451 KDa
SequenceString:
MSNVSADLIW EVSRNYNSFL VKQRTGTFSR DALNLTNQHS RKHAGFVNDK ALGIVPAEKG VKVIAKKVKA ANKPASSLYT VTYKSTARK AYKAIASQAA KHGYRADLRQ AAVARASAIL RSQRPVKPEP PKKLRGAAAR RAAAAGKQ

UniProtKB: Putative 60S ribosomal protein

+
Macromolecule #24: 60S ribosomal subunit-like protein

MacromoleculeName: 60S ribosomal subunit-like protein / type: protein_or_peptide / ID: 24 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 22.678574 KDa
SequenceString: MGKTRTIKNK HAEPSKKKAK KAGDGGVKKT KDRAGSKSKA KVPAIEVKGK PNLGQDKKKQ KRVYSEKELG IPQLNTVTPV GVTKPKGKK KGKVFVDDRE SMNTILAMVE AEKQGQIESK IMRARQLEEI REARRIEAEK KEAERKALLE NTKEQLRKKR K KNKKGGDQ ...String:
MGKTRTIKNK HAEPSKKKAK KAGDGGVKKT KDRAGSKSKA KVPAIEVKGK PNLGQDKKKQ KRVYSEKELG IPQLNTVTPV GVTKPKGKK KGKVFVDDRE SMNTILAMVE AEKQGQIESK IMRARQLEEI REARRIEAEK KEAERKALLE NTKEQLRKKR K KNKKGGDQ KSSEDEGPSL KELTSTGSKA VKSKKKKKVS FATPE

UniProtKB: 60S ribosomal subunit-like protein

+
Macromolecule #25: Putative NOC2 family protein

MacromoleculeName: Putative NOC2 family protein / type: protein_or_peptide / ID: 25 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 89.766227 KDa
SequenceString: MGTAKKNLKA TKKFEKKHLK GVLERRNKVK KIKQRQQLKE KEKAKRALDD EFYKGPNGDA DKKKPGPNKA AEMSVDDFFK GGFEILSES KKKEKPAKLG KRKRDPEAEA EEQEEKSEFS ENESDVSESD ITDNDPISES ESESEGEESE DEDLGMSKSA M DALAEKDP ...String:
MGTAKKNLKA TKKFEKKHLK GVLERRNKVK KIKQRQQLKE KEKAKRALDD EFYKGPNGDA DKKKPGPNKA AEMSVDDFFK GGFEILSES KKKEKPAKLG KRKRDPEAEA EEQEEKSEFS ENESDVSESD ITDNDPISES ESESEGEESE DEDLGMSKSA M DALAEKDP DFYKFLKEHD PEALDFDENA DLAEIDELSG SEDEEQPKKK QKTEEGGEGE EKKKKKKKKG KEGKDDRELT RE MVAKWKK SMEETHSLRA ARQVVIAFRC AATLHEIDED NPPRYSITSP EVFHDIVVTA LKHIPEVLQH HVPVKESSSG KTY VQTEGK KFKTLSMLIK NFTAAIIRLL STLSDDGTLK LTLSALHPLL PYLLSFRKLL KMLIKTVVAF WSQSASTDST RITA FLVIR RLVVIGDKAV RETVLKASYQ GLVQGCRVTN ANTLSGINLM KNSAAELWGL DQNLGYTTAF TSIRQLAIHL RNSII NNKN QAYRNVYNWQ YVHSLDFWSC VLSEHCSPLK EAEAGKESPL RPLIYPLVQV TLGAMRLIPT AIYFPLRFHL IRSLLR LSR ATDTYIPLAS ALLEVLQSAE MKKPPKSSTL KPLDFATAYK TPKSYLRTRV YQDGVGEQVV ELLSEFFVLW SRNIAFP EF ALPTIVALKR WMKEMRKPGK GNKNAKLGSS LVVLVQKLEM NAKFIEERRA KVDFAPKDRA QVDAFLKDLE WEKTPLGA Y VVAQRKLREE RKRLMEEARR EEERKRREEK AAEREEGSEE EEEDEEMEDA EGGEGSDEDE DEKGGGE

UniProtKB: Putative NOC2 family protein

+
Macromolecule #26: ATP-dependent RNA helicase DBP10

MacromoleculeName: ATP-dependent RNA helicase DBP10 / type: protein_or_peptide / ID: 26 / Number of copies: 1 / Enantiomer: LEVO / EC number: RNA helicase
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 102.993891 KDa
SequenceString: MPKRAVSPAP SENEVDIAGS LFANELDSDS DAPKANPGTA TDLDFGDLLN ATHDGGSDDD SGDEAFIDLH QRSSNRKSSN LQGKTVKKG GGFQAMGLDA NLLRAIARKG FSVPTPIQRK TIPLILERRD VVGMARTGSG KTAAFVIPMI ERLKAHSARF G ARALVLSP ...String:
MPKRAVSPAP SENEVDIAGS LFANELDSDS DAPKANPGTA TDLDFGDLLN ATHDGGSDDD SGDEAFIDLH QRSSNRKSSN LQGKTVKKG GGFQAMGLDA NLLRAIARKG FSVPTPIQRK TIPLILERRD VVGMARTGSG KTAAFVIPMI ERLKAHSARF G ARALVLSP SRELALQTLK VVKELGKGTD LKTVLLVGGD SLEEQFGLMA TNPDIIIATP GRFLHLKVEM SLDLSSIKYV VF DEADRLF EMGFAAQLTE ILHALPPSRQ TLLFSATLPS SLVEFTRAGL QDPVLVRLDA ETKVSPDLES AFFSVKSGEK EGA LLHILY DIIKMPLGDP PRSENDEEQP KSKKRKRGSD KPNFKEKPTE HSTIIFTATK HHVEYISNLL RLAGFSVSYV YGSL DQTAR KIQVDNFRRG RTNILVVTDV AARGIDIPVL ANVINYDFPP QPKIFVHRVG RTARAGQRGW AYALVRESDL PYLLD LQLF LGRRLVLGRE EKDPSFARDI VVGSLKRVEL ENNVEWVNKV LHENEDIGAL KRVTAKAEKL YMKTRNPASS QSAKRA REV IVSKGWGQLH AIFGEEAANE EQVRDNLLSK ITGYKPQETI FEIGPKGKVS QNKAAEAVRS FRQRIGPRKL PKQDEDT EM VDAEALPDHV GNAERKGQEE EESVDEDGAT QDSVLWKHDS NSDSNSESEL EVTVTNSAKA KKGQTSFADP EVYMSYTP R TTSLAEEHAY GVHSGGVRSS NFVEAARDAT MDLTNDEGAK GFGLPSRPKY RWDKRHSKYV STANDDDGSK GVKMIRGES GVKIAASFKS GRFEKWRQQH RLGRLPQVGE MEKANLVRNF SLPSGPRFKH KQMKAPKEAD KWRDDYEVRK KRVAEAKEKR IGKFKDGEG NRRELKTESD IRKAKELKER RKEKNARPSK KPKKK

UniProtKB: RNA helicase

+
Macromolecule #27: rRNA-processing protein

MacromoleculeName: rRNA-processing protein / type: protein_or_peptide / ID: 27 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 14.710419 KDa
SequenceString:
MNMSETQVNI TAAPAPATTK KNLGMRKNGQ VWLPAKKAFR PTKGLTSWEL RVKKRQEQAA MKAKEREMKE EKEAERQKRI QAIKERRKK KEEKERYEQL AAKMHKKRLE RLKRKEKRNK LLNS

UniProtKB: rRNA-processing protein

+
Macromolecule #28: 60S ribosomal protein L3-like protein

MacromoleculeName: 60S ribosomal protein L3-like protein / type: protein_or_peptide / ID: 28 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 44.456855 KDa
SequenceString: MSHRKYEAPR HGSLAFLPRK RAARHRGRVK SFPKDDPKKP VHLTAAMGYK AGMTTIVRDL DRPGAKAHKK EVVEAVTIID CPPMVVVGL VGYIETPRGL RSLTTVWAEH LSDEVKRRFY KNWYKSKKKA FTKYAKKYAE NNGASITREL ERIKKYCTVV R VLAHTQIR ...String:
MSHRKYEAPR HGSLAFLPRK RAARHRGRVK SFPKDDPKKP VHLTAAMGYK AGMTTIVRDL DRPGAKAHKK EVVEAVTIID CPPMVVVGL VGYIETPRGL RSLTTVWAEH LSDEVKRRFY KNWYKSKKKA FTKYAKKYAE NNGASITREL ERIKKYCTVV R VLAHTQIR KTPLKQKKAH LMEIQINGGS VADKVEFGRS LFEKPVTIDT IFEKDEMIDV IAVTKGHGFV GVTARWGTKK LP RKTHKGL RKVACIGAWH PSHVQWTVAR AGQMGYHHRT SVNHKIYRIG KGDDEANAST ETDLTKKKIT PMGGFVRYGE VNN DYVMIK GSVPGVKKRI MTLRKSLFTH TSRKALEKVE LKWIDTSSEF GHGAFQTAAE KKQFMGTLKK DLQTSA

UniProtKB: Large ribosomal subunit protein uL3

+
Macromolecule #29: 60S ribosomal protein L4-like protein

MacromoleculeName: 60S ribosomal protein L4-like protein / type: protein_or_peptide / ID: 29 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 39.439938 KDa
SequenceString: MASRPTVTVF GADGKPTGAT EVLPKVFSAP IRPDIVKHVH TGMAKNKRQP YAVSEKAGHQ TSAESWGTGR AVARIPRVSG GGTHRAGQG AFGNMCRSGR MFAPTKIWRK WHVKINQGQK RFATASALAA SAVAPLLMAR GHQVSTVPEV PLVVDSAAVA G DAVAKTAA ...String:
MASRPTVTVF GADGKPTGAT EVLPKVFSAP IRPDIVKHVH TGMAKNKRQP YAVSEKAGHQ TSAESWGTGR AVARIPRVSG GGTHRAGQG AFGNMCRSGR MFAPTKIWRK WHVKINQGQK RFATASALAA SAVAPLLMAR GHQVSTVPEV PLVVDSAAVA G DAVAKTAA AYKLLKAIGA GPDVEKVKKS KKLRAGKGKM RGRRHRQRRG PLIVYSPEHD GKELVKGFRN IPGVETCPVD AL NLLQLAP GGHLGRFIVW TSAAIKQLDA VYESKKGFFL PANIVSQADL SRLINSTEIQ SVLRAPKGEA RTKRACVQKK NPL RNKQIM LRLNPYASTF AKEKLGEVKA EEGKPPKVPA SFKELLHEA

UniProtKB: 60S ribosomal protein L4-like protein

+
Macromolecule #30: 60S ribosomal protein L6

MacromoleculeName: 60S ribosomal protein L6 / type: protein_or_peptide / ID: 30 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 22.132994 KDa
SequenceString: MSAAPTTKTF GKGTRTVPAP SEKAQKWYPA EDEAQPKKVR KAVRPWTPRK SLQPGTVLIL LAGRFRGKRV VLLKCLDQGV LLVTGPFKI NGVPLRRVNA RYVIATSVKV DLTGVDQAKI DEVAQPKYFT AEKAKEKASE EAFFKQGEKP QKKPVSSTRA A DQKAIDKA ...String:
MSAAPTTKTF GKGTRTVPAP SEKAQKWYPA EDEAQPKKVR KAVRPWTPRK SLQPGTVLIL LAGRFRGKRV VLLKCLDQGV LLVTGPFKI NGVPLRRVNA RYVIATSVKV DLTGVDQAKI DEVAQPKYFT AEKAKEKASE EAFFKQGEKP QKKPVSSTRA A DQKAIDKA LIANIKKVDM LASYLASSFS LRKGDKPHLM KF

UniProtKB: 60S ribosomal protein L6

+
Macromolecule #31: 60S ribosomal protein L8

MacromoleculeName: 60S ribosomal protein L8 / type: protein_or_peptide / ID: 31 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 29.74449 KDa
SequenceString: MPPKSGKKVA PAPFPQGKAG AKKAPKNPLL EKRPRNFGIG QDIQPKRNLS RMVKWPEYIR LQRQKKILRM RLKVPPAIAQ FQYTLDKNL AAQAFKLLNK YRPETKQEKK ERLLREATAI KEGKKKEDVS KKPYTVKYGL NHVVGLIENK KASLVLIAND V DPIELVVF ...String:
MPPKSGKKVA PAPFPQGKAG AKKAPKNPLL EKRPRNFGIG QDIQPKRNLS RMVKWPEYIR LQRQKKILRM RLKVPPAIAQ FQYTLDKNL AAQAFKLLNK YRPETKQEKK ERLLREATAI KEGKKKEDVS KKPYTVKYGL NHVVGLIENK KASLVLIAND V DPIELVVF LPALCRKMGI PYAIIKGKAR LGTLVHKKTA AVVAITEVRS EDKNELAKLI SAVKEGYLEK VEDTRKRWGG GI MGFKAQK REEKRKKSLE TAIKV

UniProtKB: 60S ribosomal protein L8

+
Macromolecule #32: 60S ribosomal protein l9-like protein

MacromoleculeName: 60S ribosomal protein l9-like protein / type: protein_or_peptide / ID: 32 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 21.582133 KDa
SequenceString: MRYIHSEETI PVPENLKVSI KSRLVTVEGP RGKLQKDLSH IAVNFSVVKK GVIGLEIHHG SRKDVAALRT VRTIINNMII GVTKGFKYK MRYVYAHFPI NVNVEKNAET GCYEVEIRNF IGEKIVRKVV MAPGVEVEIS KAQKDELILS GNSLEAVSQS A ADIQQICK ...String:
MRYIHSEETI PVPENLKVSI KSRLVTVEGP RGKLQKDLSH IAVNFSVVKK GVIGLEIHHG SRKDVAALRT VRTIINNMII GVTKGFKYK MRYVYAHFPI NVNVEKNAET GCYEVEIRNF IGEKIVRKVV MAPGVEVEIS KAQKDELILS GNSLEAVSQS A ADIQQICK VRNKDIRKFL DGIYVSEKGN IVED

UniProtKB: 60S ribosomal protein l9-like protein

+
Macromolecule #33: 60S ribosomal protein L12-like protein

MacromoleculeName: 60S ribosomal protein L12-like protein / type: protein_or_peptide / ID: 33 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 17.802676 KDa
SequenceString:
MPPKFDPNEI KIIHLRATGG EVGASSALAP KIGPLGLSPK KVGEDIAKAT ADWKGLRVTV RLTIQNRQAQ VSVVPTASAL IIRALKEPP RDRKKEKNIK HNKSVSLDEI IEIARTMRFK SFSKDLKGGV KEILGTAFSV GCQVDGKSPK AISDAIEAGE I DIPDE

UniProtKB: 60S ribosomal protein L12-like protein

+
Macromolecule #34: 60S ribosomal protein L13

MacromoleculeName: 60S ribosomal protein L13 / type: protein_or_peptide / ID: 34 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 24.19118 KDa
SequenceString: MAIKHNQQIP NNHFRKHWQR RVRCHFDQPG KKVTRRLARR AKAAALAPRP VDKLRPIVRC PTVKYNRRTR LGRGFTLEEL KAAGIPRLL APTIGIAVDH RRKNLSEESL AANVQRLKDY KARLILFPRK SNKPKKADTP KDQQTAETTT SLRTSFGVEQ P LAPGFTEI ...String:
MAIKHNQQIP NNHFRKHWQR RVRCHFDQPG KKVTRRLARR AKAAALAPRP VDKLRPIVRC PTVKYNRRTR LGRGFTLEEL KAAGIPRLL APTIGIAVDH RRKNLSEESL AANVQRLKDY KARLILFPRK SNKPKKADTP KDQQTAETTT SLRTSFGVEQ P LAPGFTEI SKSEIPAGIE GGAYRALRKA RSDARLVGVR EKRAKEKAEA EANKK

UniProtKB: 60S ribosomal protein L13

+
Macromolecule #35: 60S ribosomal protein L14-like protein

MacromoleculeName: 60S ribosomal protein L14-like protein / type: protein_or_peptide / ID: 35 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 16.111901 KDa
SequenceString:
MAEINVEATS WRRVEVGRVL KLENGSLAAI VEIIDHKRVL ADGPSSDPKL ATPRGIVPLS RALLTPIVIP KLPRGARTGA VKKAWEAYG VDAKWKETNW AKKQLQQERR QSLTDFDRFK VMRLKKQRRF EERKALAKIK AAA

UniProtKB: 60S ribosomal protein L14-like protein

+
Macromolecule #36: Ribosomal protein L15

MacromoleculeName: Ribosomal protein L15 / type: protein_or_peptide / ID: 36 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 24.307287 KDa
SequenceString: MGALKYLEEL SKKKQSDVVR FLLRVRCWEY RQLNVIHRAS RPSRPDKARR LGYKAKQGYV IYRVRVRRGG RKRPVPKGAT YGKPTNQGV NQLKYQRSLR ATAEERVGRR CSNLRVLNSY WVNQDSTYKY YEVILVDPNH KAIRRDPRIN WICNPVHKHR E CRGLTSTG ...String:
MGALKYLEEL SKKKQSDVVR FLLRVRCWEY RQLNVIHRAS RPSRPDKARR LGYKAKQGYV IYRVRVRRGG RKRPVPKGAT YGKPTNQGV NQLKYQRSLR ATAEERVGRR CSNLRVLNSY WVNQDSTYKY YEVILVDPNH KAIRRDPRIN WICNPVHKHR E CRGLTSTG KKSRGLNKGH RFNKTRAGRR KTWKRHNTLS LWRYR

UniProtKB: Ribosomal protein L15

+
Macromolecule #37: 60S ribosomal protein L16-like protein

MacromoleculeName: 60S ribosomal protein L16-like protein / type: protein_or_peptide / ID: 37 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 22.993195 KDa
SequenceString: MSSFESVVVI DGKGHLLGRL ASIVAKQLLS GQKIVVVRCE ALNISGEFFR AKLKYHAYLR KMTRYNPTRG GPFHFRAPSR IFYKAVRGM IPHKTARGAA ALERLKVFEG VPPPYDKKKK MVVPQALRVL RLQPGRKYCT VGRLSHEVGW KYQDVVARLE E RRKAKGAA ...String:
MSSFESVVVI DGKGHLLGRL ASIVAKQLLS GQKIVVVRCE ALNISGEFFR AKLKYHAYLR KMTRYNPTRG GPFHFRAPSR IFYKAVRGM IPHKTARGAA ALERLKVFEG VPPPYDKKKK MVVPQALRVL RLQPGRKYCT VGRLSHEVGW KYQDVVARLE E RRKAKGAA YYERKKLAAR QLSEAKKAAA AKVDPKVSEA LAAYGY

UniProtKB: 60S ribosomal protein L16-like protein

+
Macromolecule #38: 60S ribosomal protein l17-like protein

MacromoleculeName: 60S ribosomal protein l17-like protein / type: protein_or_peptide / ID: 38 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 21.072207 KDa
SequenceString:
MVRYAATEIA PTKSARARGS YLRVSFKNTR ETAQAINGWK LQRALTFLQN VIDKKEAVPM RRYAGSTGRT AQGKQWGVSR ARWPVKSAQ FLIGLLKNAE ANADAKGLDT GNLIIKHIQV NQAPKQRRRT YRAHGRINPY MSNPCHIELI LTEAEETVQK S EAVVRDVE SHLSSRQRGV RIRRALTAA

UniProtKB: Large ribosomal subunit protein uL22

+
Macromolecule #39: Ribosomal protein L18-like protein

MacromoleculeName: Ribosomal protein L18-like protein / type: protein_or_peptide / ID: 39 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 24.195535 KDa
SequenceString: MDLVCAFIGP LFAPGARRLN LEEIAAESSS GIDLRWKHVR SSHRKAPKSD NVYLKLLVKL YRFLARRTEA PFNKVVLRRL FMSRINRPP VSLSRIARNL KNGNEKKTVV VVATVTDDNR LLQVPKMEVA ALRFTAKARA RIEAAGGRTL TLDQLALEKP T GANTLLLR ...String:
MDLVCAFIGP LFAPGARRLN LEEIAAESSS GIDLRWKHVR SSHRKAPKSD NVYLKLLVKL YRFLARRTEA PFNKVVLRRL FMSRINRPP VSLSRIARNL KNGNEKKTVV VVATVTDDNR LLQVPKMEVA ALRFTAKARA RIEAAGGRTL TLDQLALEKP T GANTLLLR GPKNAREAVK HFGFGPHKHK KPYVRSKGRK FERARGRRRS RGFKV

UniProtKB: Ribosomal protein L18-like protein

+
Macromolecule #40: 60S ribosomal protein L20

MacromoleculeName: 60S ribosomal protein L20 / type: protein_or_peptide / ID: 40 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 20.341893 KDa
SequenceString:
MGRLQEYQVI GRHLPTEANP NPALYRMRIF APNEVVAKSR FWYFLRGLKK VKKATGEIVS VNVISEKHPL KVKNFGIWLR YDSRSGTHN MYKEYRETSR VAAVEAMYAD MAARHRARFR SIHILKVVEL EKTEDVKRPY IKQLVAKNLS FPLPHRVPKI S TKKIFSAK RPSTFS

UniProtKB: 60S ribosomal protein L20

+
Macromolecule #41: 60S ribosomal protein l21-like protein

MacromoleculeName: 60S ribosomal protein l21-like protein / type: protein_or_peptide / ID: 41 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 18.159227 KDa
SequenceString:
MGHAAGLRSG TRYAFSRGFR KHGQIPLSTY LRTYRVGDIV DIKVNGAVQK GMPHKFYHGK TGVVYNVTKS AVGVIVYKRV KHRYIEKRI NVRIEHVKPS RSREDFLRRV KENAELKKKA KAEGVPVQLK RQPAMPREAH TVSIADNKPV TLAPVAYETT I

UniProtKB: 60S ribosomal protein l21-like protein

+
Macromolecule #42: 60S ribosomal protein l23-like protein

MacromoleculeName: 60S ribosomal protein l23-like protein / type: protein_or_peptide / ID: 42 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 14.674428 KDa
SequenceString:
MAKQKRGAPG GKLKMTLGLP VGAIMNCADN SGARNLYIIA VKGAGARLNR LPAGGVGDMV MATVKKGKPE LRKKVHPAVI VRQAKPWKR FDGVFLYFED NAGVIVNPKG EMKGSAITGP VGKEAAELWP RIASNAGVVM

UniProtKB: 60S ribosomal protein l23-like protein

+
Macromolecule #43: 60S ribosomal protein L25-like protein

MacromoleculeName: 60S ribosomal protein L25-like protein / type: protein_or_peptide / ID: 43 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 17.175334 KDa
SequenceString:
MAPKDVKKGG ASKAAKGAQA KKAAQAALKG VHSHKKTKVR KSTTFHRPKT LVLSRAPKYP RKSIPHEPRL DEHKIIIHPL NTEGALKKI EEQNTLVFIV DVKANKAQIK QALKKLYDID TVKINTLIRP DGTKKAFARL TPDVDALDIA ATKLGLV

UniProtKB: 60S ribosomal protein L25-like protein

+
Macromolecule #44: 60S ribosomal protein L26-like protein

MacromoleculeName: 60S ribosomal protein L26-like protein / type: protein_or_peptide / ID: 44 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 15.565322 KDa
SequenceString:
MKVRPTVSSS RRKARKAHFS APSSVRRVIM SAPLSKELRE KYNVRSIPIR KGDEVQIVRG AHKDKEGKVT SVYRLKYVIH VERVTREKA TGQTVPIGIH PSNVVITKLH LDKDRENILA RIKAGREQVA KAKGKKTAA

UniProtKB: 60S ribosomal protein L26-like protein

+
Macromolecule #45: Putative 60S ribosomal protein

MacromoleculeName: Putative 60S ribosomal protein / type: protein_or_peptide / ID: 45 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 13.872177 KDa
SequenceString:
MSSTQKKQRS AIADVVAREY TIHLHKRLHG VTFKKRAPRA IKEIKKFAQK AMGTSDVRLD PQLNKKVWEQ GIKGVPFRIR VRISRRRND EEGAKEKLYS YVQAVNVKNP KGLLTSVVEE E

UniProtKB: Putative 60S ribosomal protein

+
Macromolecule #46: 60S ribosomal protein L32-like protein

MacromoleculeName: 60S ribosomal protein L32-like protein / type: protein_or_peptide / ID: 46 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 15.095985 KDa
SequenceString:
MVAAKKHVPI VKKRTKRFMR HQSDRFKCLD SAWRKPKGID NRVRRRFKGN LAMPSIGYGS NKKTKHMMPS GHKAFLVHNV KDVELLLMH NRTYAAEIAH NVSSRKRIDI ITRAKQLGVK VTNAKAKVTT EV

UniProtKB: 60S ribosomal protein L32-like protein

+
Macromolecule #47: 60S ribosomal protein l33-like protein

MacromoleculeName: 60S ribosomal protein l33-like protein / type: protein_or_peptide / ID: 47 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 12.330337 KDa
SequenceString:
MPSEAGHRLY VKGRHLSYQR GRRNTHPKTS LIKIEGVDDT AAANFYLGKR VAYVYRAQKE VRGTKIRVIW GKITRPHGNS GVVRAKFTH PLPARSFGAS VRIMLYPSSI

UniProtKB: 60S ribosomal protein l33-like protein

+
Macromolecule #48: dolichyl-diphosphooligosaccharide--protein glycotransferase

MacromoleculeName: dolichyl-diphosphooligosaccharide--protein glycotransferase
type: protein_or_peptide / ID: 48 / Number of copies: 1 / Enantiomer: LEVO
EC number: dolichyl-diphosphooligosaccharide-protein glycotransferase
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 105.169227 KDa
SequenceString: MSSNGKVKAG QLWSKNKEEL TKILGELKTE LSQLRIQKIS SSGAKLNKIH DLRKSIARVL TVINAKQRAQ LRLFYKNKKY LPLDLRPKL TRALRRRLSK EDASRVLEKT KKRLTHFPQR KYAVKAATYS EGPALSIYHS HQREARCSLV QCCTFEPELR E SLLLLPVA ...String:
MSSNGKVKAG QLWSKNKEEL TKILGELKTE LSQLRIQKIS SSGAKLNKIH DLRKSIARVL TVINAKQRAQ LRLFYKNKKY LPLDLRPKL TRALRRRLSK EDASRVLEKT KKRLTHFPQR KYAVKAATYS EGPALSIYHS HQREARCSLV QCCTFEPELR E SLLLLPVA ASLKGPNFTR RERQHRNPSE ATMSAAEPLK LLASAGKGKS TRSVLRVAIL VLIAGAAVAS RLFSVIRFES II HEFDPWF NFRATKYLVA NGFYKFWDWF DDRTWHPLGR VTGGTLYPGL MVTSGVIYHL LRFLTVPVDI RNICVLLAPG FSG LTAIAA YLLTNEMTTS PSAGLLAAAF MGIAPGYISR SVAGSYDNEA IAIFLLVFTF FLWIKALKQG SMLWGALCAL FYGY MVASW GGYAFITCLL PLHSFVLICM GRYSTRLYVA YTTWYALGTL ASMQIPFVGF LPVKTSEHMP ALGIFGFLQL LAFLD YVRS TISSRQFQTF LWLFAGGIFG LGLLGLVIAT SAGLIAPWSG RFYSLWDTGY AKIHIPIIAS VSEHQPTAWP AFFFDL NML VWLFPVGVYL CFQQLGDEHV FIIVYALFGS YFAGVMVRLM LTLTPVVCVA AAIAFSSLLD TYLNLKTPNP GQAQATE DA GKKKSGLKAA SKPAVGVYAL WGKTMMISGL TIYLLLFVLH CTWVTSNAYS SPSVVLASRL PDGSQHIIDD YREAYQWL R QNTREDAKIM SWWDYGYQIG GMADRPTLVD NNTWNNTHIA TVGKAMASRE EVSYPIMRQH EVDYVLVVFG GLLGYSGDD INKFLWMVRI AEGIWPDEVS ERAFFTPRGE YRVDAEATDT MKNSLMYKMC YYNYNNLFPP GQAVDRMRGV RLPEVGPTLN TLEEAFTSE NWIIRIYKVK DLDNLGRDHA SAAAFERGHK KKKATKKRGP RVLRVE

UniProtKB: Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3

+
Macromolecule #49: 60S ribosomal protein L36

MacromoleculeName: 60S ribosomal protein L36 / type: protein_or_peptide / ID: 49 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 12.784053 KDa
SequenceString:
MSEDATPKAP VERTGLIRGL NKGHKTTRRV LKERPSRRKG AQSKRTQFVR SLIREVAGLA PYERRVIELL RNGKDKRARK FSKKKLGTF GRAKRKCEEL QRIIAESRRA H

UniProtKB: 60S ribosomal protein L36

+
Macromolecule #50: Ribosomal protein L37

MacromoleculeName: Ribosomal protein L37 / type: protein_or_peptide / ID: 50 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 10.660455 KDa
SequenceString:
MTKGTSSFGK RHNKTHGLCR RCGRRSLHNQ KKVCASCGYP AAKTRKYNWS EKAKRRKVTG TGRMRYLSTV PRRFKNGFRT GVPKGARGP AVSTSS

UniProtKB: Ribosomal protein L37

+
Macromolecule #51: Ribosomal protein

MacromoleculeName: Ribosomal protein / type: protein_or_peptide / ID: 51 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chaetomium thermophilum (fungus) / Strain: DSM 1495 / CBS 144.50 / IMI 039719
Molecular weightTheoretical: 24.055332 KDa
SequenceString: MSKITVAGVR QNVAELLDYS NNVKKRNFLE TVELQIGLKN YDPQRDKRFS GTVKLPTVPR PNMSICILGD QHDIDRAKHG GIDAMSADD LKKLNKNKKL IKKLARKYDA FIASESLIKQ IPRLLGPGLS KAGKFPTPVS HSDDLSAKVN EVKSTVKFQL K KVLCMGVA ...String:
MSKITVAGVR QNVAELLDYS NNVKKRNFLE TVELQIGLKN YDPQRDKRFS GTVKLPTVPR PNMSICILGD QHDIDRAKHG GIDAMSADD LKKLNKNKKL IKKLARKYDA FIASESLIKQ IPRLLGPGLS KAGKFPTPVS HSDDLSAKVN EVKSTVKFQL K KVLCMGVA VGNVGMTQEQ LVANIMLAIN YLVSLLKKGW QNVGSLTIKA TMSPPKRLY

UniProtKB: Ribosomal protein

+
Macromolecule #52: GUANOSINE-5'-TRIPHOSPHATE

MacromoleculeName: GUANOSINE-5'-TRIPHOSPHATE / type: ligand / ID: 52 / Number of copies: 1 / Formula: GTP
Molecular weightTheoretical: 523.18 Da
Chemical component information

ChemComp-GTP:
GUANOSINE-5'-TRIPHOSPHATE / GTP, energy-carrying molecule*YM

+
Macromolecule #53: ZINC ION

MacromoleculeName: ZINC ION / type: ligand / ID: 53 / Number of copies: 2 / Formula: ZN
Molecular weightTheoretical: 65.409 Da

-
Experimental details

-
Structure determination

Methodcryo EM
Processingsingle particle reconstruction
Aggregation stateparticle

-
Sample preparation

BufferpH: 7.4
VitrificationCryogen name: ETHANE

-
Electron microscopy

MicroscopeFEI TITAN KRIOS
Image recordingFilm or detector model: GATAN K2 SUMMIT (4k x 4k) / Detector mode: COUNTING / Average electron dose: 44.0 e/Å2
Electron beamAcceleration voltage: 300 kV / Electron source: FIELD EMISSION GUN
Electron opticsIllumination mode: FLOOD BEAM / Imaging mode: BRIGHT FIELD / Nominal defocus max: 2.5 µm / Nominal defocus min: 0.8 µm
Experimental equipment
Model: Titan Krios / Image courtesy: FEI Company

+
Image processing

Startup modelType of model: EMDB MAP
EMDB ID:

3891

Final reconstructionResolution.type: BY AUTHOR / Resolution: 3.1 Å / Resolution method: FSC 0.143 CUT-OFF / Number images used: 30333
Initial angle assignmentType: OTHER / Details: Relion
Final angle assignmentType: OTHER / Details: Relion
FSC plot (resolution estimation)

+
About Yorodumi

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jan 31, 2019. EMDB accession codes are about to change! (news from PDBe EMDB page)

EMDB accession codes are about to change! (news from PDBe EMDB page)

  • The allocation of 4 digits for EMDB accession codes will soon come to an end. Whilst these codes will remain in use, new EMDB accession codes will include an additional digit and will expand incrementally as the available range of codes is exhausted. The current 4-digit format prefixed with “EMD-” (i.e. EMD-XXXX) will advance to a 5-digit format (i.e. EMD-XXXXX), and so on. It is currently estimated that the 4-digit codes will be depleted around Spring 2019, at which point the 5-digit format will come into force.
  • The EM Navigator/Yorodumi systems omit the EMD- prefix.

Related info.:Q: What is EMD? / ID/Accession-code notation in Yorodumi/EM Navigator

External links:EMDB Accession Codes are Changing Soon! / Contact to PDBj

+
Jul 12, 2017. Major update of PDB

Major update of PDB

  • wwPDB released updated PDB data conforming to the new PDBx/mmCIF dictionary.
  • This is a major update changing the version number from 4 to 5, and with Remediation, in which all the entries are updated.
  • In this update, many items about electron microscopy experimental information are reorganized (e.g. em_software).
  • Now, EM Navigator and Yorodumi are based on the updated data.

External links:wwPDB Remediation / Enriched Model Files Conforming to OneDep Data Standards Now Available in the PDB FTP Archive

-
Yorodumi

Thousand views of thousand structures

  • Yorodumi is a browser for structure data from EMDB, PDB, SASBDB, etc.
  • This page is also the successor to EM Navigator detail page, and also detail information page/front-end page for Omokage search.
  • The word "yorodu" (or yorozu) is an old Japanese word meaning "ten thousand". "mi" (miru) is to see.

Related info.:EMDB / PDB / SASBDB / Comparison of 3 databanks / Yorodumi Search / Aug 31, 2016. New EM Navigator & Yorodumi / Yorodumi Papers / Jmol/JSmol / Function and homology information / Changes in new EM Navigator and Yorodumi

Read more