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- EMDB-14430: Structure of the Escherichia coli formate hydrogenlyase complex (... -

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Basic information

Entry
Database: EMDB / ID: EMD-14430
TitleStructure of the Escherichia coli formate hydrogenlyase complex (aerobic preparation, composite structure)
Map data
Sample
  • Complex: Escherichia coli formate hydrogenlyase complex
    • Protein or peptide: x 7 types
  • Ligand: x 6 types
KeywordsFHL / group-4 membrane bound hydrogenase / [NiFe] hydrogenase / MEMBRANE PROTEIN
Function / homology
Function and homology information


formate dehydrogenase (hydrogenase) / formate oxidation / oxidoreductase activity, acting on the aldehyde or oxo group of donors / formate dehydrogenase complex / glucose catabolic process / formate dehydrogenase (NAD+) activity / anaerobic electron transport chain / urate catabolic process / molybdopterin cofactor binding / anaerobic respiration ...formate dehydrogenase (hydrogenase) / formate oxidation / oxidoreductase activity, acting on the aldehyde or oxo group of donors / formate dehydrogenase complex / glucose catabolic process / formate dehydrogenase (NAD+) activity / anaerobic electron transport chain / urate catabolic process / molybdopterin cofactor binding / anaerobic respiration / oxidoreductase activity, acting on NAD(P)H / nickel cation binding / NADH dehydrogenase (ubiquinone) activity / quinone binding / ATP synthesis coupled electron transport / aerobic respiration / respiratory electron transport chain / NAD binding / 4 iron, 4 sulfur cluster binding / oxidoreductase activity / metal ion binding / membrane / plasma membrane / cytosol
Similarity search - Function
: / : / : / : / Formate dehydrogenase H, molybdopterin-binding domain / Formate dehydrogenase, alpha subunit / Formate dehydrogenase H, N-terminal / : / Prokaryotic molybdopterin oxidoreductases signature 2. / 4Fe-4S dicluster domain ...: / : / : / : / Formate dehydrogenase H, molybdopterin-binding domain / Formate dehydrogenase, alpha subunit / Formate dehydrogenase H, N-terminal / : / Prokaryotic molybdopterin oxidoreductases signature 2. / 4Fe-4S dicluster domain / Molybdopterin oxidoreductase, molybdopterin cofactor binding site / Prokaryotic molybdopterin oxidoreductases signature 1. / Prokaryotic molybdopterin oxidoreductases signature 3. / Molybdopterin oxidoreductase, prokaryotic, conserved site / Molybdopterin oxidoreductase Fe4S4 domain / Nickel-dependent hydrogenase, large subunit / Nickel-dependent hydrogenase / Molybdopterin oxidoreductase Fe4S4 domain / Molybdopterin dinucleotide-binding domain / Molydopterin dinucleotide binding domain / Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. / NADH-ubiquinone oxidoreductase, 20 Kd subunit / NADH-quinone oxidoreductase, chain I / NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site / Respiratory chain NADH dehydrogenase 49 Kd subunit signature. / NADH-quinone oxidoreductase, subunit D / Respiratory-chain NADH dehydrogenase, 49 Kd subunit / NADH:ubiquinone oxidoreductase / : / NADH:ubiquinone oxidoreductase, 30kDa subunit / NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily / Respiratory-chain NADH dehydrogenase, 30 Kd subunit / NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit / NADH:quinone oxidoreductase/Mrp antiporter, TM / NADH:ubiquinone oxidoreductase, subunit 1, conserved site / Respiratory-chain NADH dehydrogenase subunit 1 signature 1. / Respiratory-chain NADH dehydrogenase subunit 1 signature 2. / NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H / NADH dehydrogenase / Aspartate decarboxylase-like domain superfamily / Molybdopterin oxidoreductase, 4Fe-4S domain / Prokaryotic molybdopterin oxidoreductases 4Fe-4S domain profile. / NADH:ubiquinone oxidoreductase-like, 20kDa subunit / NADH ubiquinone oxidoreductase, 20 Kd subunit / Molybdopterin oxidoreductase / Molybdopterin oxidoreductase / [NiFe]-hydrogenase, large subunit / 4Fe-4S dicluster domain / 4Fe-4S ferredoxin, iron-sulphur binding, conserved site / 4Fe-4S ferredoxin-type iron-sulfur binding region signature. / 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. / 4Fe-4S ferredoxin-type, iron-sulphur binding domain
Similarity search - Domain/homology
Formate dehydrogenase H / Formate hydrogenlyase subunit 2 / Formate hydrogenlyase subunit 3 / Formate hydrogenlyase subunit 4 / Formate hydrogenlyase subunit 5 / Formate hydrogenlyase subunit 6 / Formate hydrogenlyase subunit 7
Similarity search - Component
Biological speciesEscherichia coli (E. coli) / Escherichia coli K-12 (bacteria)
Methodsingle particle reconstruction / cryo EM / Resolution: 3.4 Å
AuthorsSteinhilper R / Murphy BJ
Funding support Germany, 1 items
OrganizationGrant numberCountry
Max Planck Society Germany
CitationJournal: Nat Commun / Year: 2022
Title: Structure of the membrane-bound formate hydrogenlyase complex from Escherichia coli.
Authors: Ralf Steinhilper / Gabriele Höff / Johann Heider / Bonnie J Murphy /
Abstract: The prototypical hydrogen-producing enzyme, the membrane-bound formate hydrogenlyase (FHL) complex from Escherichia coli, links formate oxidation at a molybdopterin-containing formate dehydrogenase ...The prototypical hydrogen-producing enzyme, the membrane-bound formate hydrogenlyase (FHL) complex from Escherichia coli, links formate oxidation at a molybdopterin-containing formate dehydrogenase to proton reduction at a [NiFe] hydrogenase. It is of intense interest due to its ability to efficiently produce H during fermentation, its reversibility, allowing H-dependent CO reduction, and its evolutionary link to respiratory complex I. FHL has been studied for over a century, but its atomic structure remains unknown. Here we report cryo-EM structures of FHL in its aerobically and anaerobically isolated forms at resolutions reaching 2.6 Å. This includes well-resolved density for conserved loops linking the soluble and membrane arms believed to be essential in coupling enzymatic turnover to ion translocation across the membrane in the complex I superfamily. We evaluate possible structural determinants of the bias toward hydrogen production over its oxidation and describe an unpredicted metal-binding site near the interface of FdhF and HycF subunits that may play a role in redox-dependent regulation of FdhF interaction with the complex.
History
DepositionFeb 23, 2022-
Header (metadata) releaseSep 28, 2022-
Map releaseSep 28, 2022-
UpdateJul 17, 2024-
Current statusJul 17, 2024Processing site: PDBe / Status: Released

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Structure visualization

Supplemental images

emd_14430.png

Downloads & links

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Map

FileDownload / File: emd_14430.map.gz / Format: CCP4 / Size: 421.9 MB / Type: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
Projections & slices

Image control

Size
Brightness
Contrast
Others
AxesX (Sec.)Y (Row.)Z (Col.)
0.83 Å/pix.
x 480 pix.
= 397.44 Å		0.83 Å/pix.
x 480 pix.
= 397.44 Å		0.83 Å/pix.
x 480 pix.
= 397.44 Å

Surface

Projections

Slices (1/3)

Slices (1/2)

Slices (2/3)

Images are generated by Spider.

Voxel sizeX=Y=Z: 0.828 Å
Density

Histogram

Histogram (log scale)
Contour LevelBy AUTHOR: 8.0
Minimum - Maximum-27.956227999999999 - 69.051789999999997
Average (Standard dev.)0.0016970271 (±1.1045654)
SymmetrySpace group: 1
Details

EMDB XML:

Map geometry
Axis orderZYX
Origin000
Dimensions480480480
Spacing480480480
CellA=B=C: 397.44 Å
α=β=γ: 90.0 °

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Supplemental data

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Sample components

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Entire : Escherichia coli formate hydrogenlyase complex

EntireName: Escherichia coli formate hydrogenlyase complex
Components
  • Complex: Escherichia coli formate hydrogenlyase complex
    • Protein or peptide: Formate hydrogenlyase subunit 3
    • Protein or peptide: Formate hydrogenlyase subunit 5
    • Protein or peptide: Formate hydrogenlyase subunit 2
    • Protein or peptide: Formate hydrogenlyase subunit 7
    • Protein or peptide: Formate hydrogenlyase subunit 6
    • Protein or peptide: Formate hydrogenlyase subunit 4
    • Protein or peptide: Formate dehydrogenase H
  • Ligand: NICKEL (II) ION
  • Ligand: CARBONMONOXIDE-(DICYANO) IRON
  • Ligand: IRON/SULFUR CLUSTER
  • Ligand: FE (III) ION
  • Ligand: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE
  • Ligand: MOLYBDENUM(VI) ION

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Supramolecule #1: Escherichia coli formate hydrogenlyase complex

SupramoleculeName: Escherichia coli formate hydrogenlyase complex / type: complex / ID: 1 / Parent: 0 / Macromolecule list: #1-#7
Source (natural)Organism: Escherichia coli (E. coli) / Strain: K12

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Macromolecule #1: Formate hydrogenlyase subunit 3

MacromoleculeName: Formate hydrogenlyase subunit 3 / type: protein_or_peptide / ID: 1 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Escherichia coli K-12 (bacteria) / Strain: K12
Molecular weightTheoretical: 64.121742 KDa
SequenceString: MSAISLINSG VAWFVAAAVL AFLFSFQKAL SGWIAGIGGA VGSLYTAAAG FTVLTGAVGV SGALSLVSYD VQISPLNAIW LITLGLCGL FVSLYNIDWH RHAQVKCNGL QINMLMAAAV CAVIASNLGM FVVMAEIMAL CAVFLTSNSK EGKLWFALGR L GTLLLAIA ...String:
MSAISLINSG VAWFVAAAVL AFLFSFQKAL SGWIAGIGGA VGSLYTAAAG FTVLTGAVGV SGALSLVSYD VQISPLNAIW LITLGLCGL FVSLYNIDWH RHAQVKCNGL QINMLMAAAV CAVIASNLGM FVVMAEIMAL CAVFLTSNSK EGKLWFALGR L GTLLLAIA CWLLWQRYGT LDLRLLDMRM QQLPLGSDIW LLGVIGFGLL AGIIPLHGWV PQAHANASAP AAALFSTVVM KI GLLGILT LSLLGGNAPL WWGIALLVLG MITAFVGGLY ALVEHNIQRL LAYHTLENIG IILLGLGAGV TGIALEQPAL IAL GLVGGL YHLLNHSLFK SVLFLGAGSV WFRTGHRDIE KLGGIGKKMP VISIAMLVGL MAMAALPPLN GFAGEWVIYQ SFFK LSNSG AFVARLLGPL LAVGLAITGA LAVMCMAKVY GVTFLGAPRT KEAENATCAP LLMSVSVVAL AICCVIGGVA APWLL PMLS AAVPLPLEPA NTTVSQPMIT LLLIACPLLP FIIMAICKGD RLPSRSRGAA WVCGYDHEKS MVITAHGFAM PVKQAF APV LKLRKWLNPV SLVPGWQCEG SALLFRRMAL VELAVLVVII VSRGA

UniProtKB: Formate hydrogenlyase subunit 3

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Macromolecule #2: Formate hydrogenlyase subunit 5

MacromoleculeName: Formate hydrogenlyase subunit 5 / type: protein_or_peptide / ID: 2 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Escherichia coli K-12 (bacteria) / Strain: K12
Molecular weightTheoretical: 66.589859 KDa
SequenceString: MSEEKLGQHY LAALNEAFPG VVLDHAWQTK DQLTVTVKVN YLPEVVEFLY YKQGGWLSVL FGNDERKLNG HYAVYYVLSM EKGHHHHHH HHHHGSTKCW ITVRVEVDAN KPEYPSVTPR VPAAVWGERE VRDMYGLIPV GLPDERRLVL PDDWPDELYP L RKDSMDYR ...String:
MSEEKLGQHY LAALNEAFPG VVLDHAWQTK DQLTVTVKVN YLPEVVEFLY YKQGGWLSVL FGNDERKLNG HYAVYYVLSM EKGHHHHHH HHHHGSTKCW ITVRVEVDAN KPEYPSVTPR VPAAVWGERE VRDMYGLIPV GLPDERRLVL PDDWPDELYP L RKDSMDYR QRPAPTTDAE TYEFINELGD KKNNVVPIGP LHVTSDEPGH FRLFVDGENI IDADYRLFYV HRGMEKLAET RM GYNEVTF LSDRVCGICG FAHSTAYTTS VENAMGIQVP ERAQMIRAIL LEVERLHSHL LNLGLACHFT GFDSGFMQFF RVR ETSMKM AEILTGARKT YGLNLIGGIR RDLLKDDMIQ TRQLAQQMRR EVQELVDVLL STPNMEQRTV GIGRLDPEIA RDFS NVGPM VRASGHARDT RADHPFVGYG LLPMEVHSEQ GCDVISRLKV RINEVYTALN MIDYGLDNLP GGPLMVEGFT YIPHR FALG FAEAPRGDDI HWSMTGDNQK LYRWRCRAAT YANWPTLRYM LRGNTVSDAP LIIGSLDPCY SCTDRMTVVD VRKKKS KVV PYKELERYSI ERKNSPLK

UniProtKB: Formate hydrogenlyase subunit 5

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Macromolecule #3: Formate hydrogenlyase subunit 2

MacromoleculeName: Formate hydrogenlyase subunit 2 / type: protein_or_peptide / ID: 3 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Escherichia coli K-12 (bacteria) / Strain: K12
Molecular weightTheoretical: 21.899289 KDa
SequenceString: MNRFVIADST LCIGCHTCEA ACSETHRQHG LQSMPRLRVM LNEKESAPQL CHHCEDAPCA VVCPVNAITR VDGAVQLNES LCVSCKLCG IACPFGAIEF SGSRPLDIPA NANTPKAPPA PPAPARVSTL LDWVPGIRAI AVKCDLCSFD EQGPACVRMC P TKALHLVD ...String:
MNRFVIADST LCIGCHTCEA ACSETHRQHG LQSMPRLRVM LNEKESAPQL CHHCEDAPCA VVCPVNAITR VDGAVQLNES LCVSCKLCG IACPFGAIEF SGSRPLDIPA NANTPKAPPA PPAPARVSTL LDWVPGIRAI AVKCDLCSFD EQGPACVRMC P TKALHLVD NTDIARVSKR KRELTFNTDF GDLTLFQQAQ SGEAK

UniProtKB: Formate hydrogenlyase subunit 2

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Macromolecule #4: Formate hydrogenlyase subunit 7

MacromoleculeName: Formate hydrogenlyase subunit 7 / type: protein_or_peptide / ID: 4 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Escherichia coli K-12 (bacteria) / Strain: K12
Molecular weightTheoretical: 28.03317 KDa
SequenceString: MSNLLGPRDA NGIPVPMTVD ESIASMKASL LKKIKRSAYV YRVDCGGCNG CEIEIFATLS PLFDAERFGI KVVPSPRHAD ILLFTGAVT RAMRSPALRA WQSAPDPKIC ISYGACGNSG GIFHDLYCVW GGTDKIVPVD VYIPGCPPTP AATLYGFAMA L GLLEQKIH ...String:
MSNLLGPRDA NGIPVPMTVD ESIASMKASL LKKIKRSAYV YRVDCGGCNG CEIEIFATLS PLFDAERFGI KVVPSPRHAD ILLFTGAVT RAMRSPALRA WQSAPDPKIC ISYGACGNSG GIFHDLYCVW GGTDKIVPVD VYIPGCPPTP AATLYGFAMA L GLLEQKIH ARGPGELDEQ PAEILHGDMV QPLRVKVDRE ARRLAGYRYG RQIADDYLTQ LGQGEEQVAR WLEAENDPRL NE IVSHLNH VVEEARIR

UniProtKB: Formate hydrogenlyase subunit 7

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Macromolecule #5: Formate hydrogenlyase subunit 6

MacromoleculeName: Formate hydrogenlyase subunit 6 / type: protein_or_peptide / ID: 5 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Escherichia coli K-12 (bacteria) / Strain: K12
Molecular weightTheoretical: 20.336395 KDa
SequenceString:
MFTFIKKVIK TGTATSSYPL EPIAVDKNFR GKPEQNPQQC IGCAACVNAC PSNALTVETD LATGELAWEF NLGHCIFCGR CEEVCPTAA IKLSQEYELA VWKKEDFLQQ SRFALCNCRV CNRPFAVQKE IDYAIALLKH NGDSRAENHR ESFETCPECK R QKCLVPSD RIELTRHMKE AI

UniProtKB: Formate hydrogenlyase subunit 6

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Macromolecule #6: Formate hydrogenlyase subunit 4

MacromoleculeName: Formate hydrogenlyase subunit 4 / type: protein_or_peptide / ID: 6 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Escherichia coli K-12 (bacteria) / Strain: K12
Molecular weightTheoretical: 33.049152 KDa
SequenceString: MSVLYPLIQA LVLFAVAPLL SGITRVARAR LHNRRGPGVL QEYRDIIKLL GRQSVGPDAS GWVFRLTPYV MVGVMLTIAT ALPVVTVGS PLPQLGDLIT LLYLFAIARF FFAISGLDTG SPFTAIGASR EAMLGVLVEP MLLLGLWVAA QVAGSTNISN I TDTVYHWP ...String:
MSVLYPLIQA LVLFAVAPLL SGITRVARAR LHNRRGPGVL QEYRDIIKLL GRQSVGPDAS GWVFRLTPYV MVGVMLTIAT ALPVVTVGS PLPQLGDLIT LLYLFAIARF FFAISGLDTG SPFTAIGASR EAMLGVLVEP MLLLGLWVAA QVAGSTNISN I TDTVYHWP LSQSIPLVLA LCACAFATFI EMGKLPFDLA EAEQELQEGP LSEYSGSGFG VMKWGISLKQ LVVLQMFVGV FI PWGQMET FTAGGLLLAL VIAIVKLVVG VLVIALFENS MARLRLDITP RITWAGFGFA FLAFVSLLAA

UniProtKB: Formate hydrogenlyase subunit 4

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Macromolecule #7: Formate dehydrogenase H

MacromoleculeName: Formate dehydrogenase H / type: protein_or_peptide / ID: 7 / Number of copies: 1 / Enantiomer: LEVO / EC number: formate dehydrogenase (hydrogenase)
Source (natural)Organism: Escherichia coli K-12 (bacteria) / Strain: K12
Molecular weightTheoretical: 79.465703 KDa
SequenceString: MKKVVTVCPY CASGCKINLV VDNGKIVRAE AAQGKTNQGT LCLKGYYGWD FINDTQILTP RLKTPMIRRQ RGGKLEPVSW DEALNYVAE RLSAIKEKYG PDAIQTTGSS RGTGNETNYV MQKFARAVIG TNNVDCCARV UHGPSVAGLH QSVGNGAMSN A INEIDNTD ...String:
MKKVVTVCPY CASGCKINLV VDNGKIVRAE AAQGKTNQGT LCLKGYYGWD FINDTQILTP RLKTPMIRRQ RGGKLEPVSW DEALNYVAE RLSAIKEKYG PDAIQTTGSS RGTGNETNYV MQKFARAVIG TNNVDCCARV UHGPSVAGLH QSVGNGAMSN A INEIDNTD LVFVFGYNPA DSHPIVANHV INAKRNGAKI IVCDPRKIET ARIADMHIAL KNGSNIALLN AMGHVIIEEN LY DKAFVAS RTEGFEEYRK IVEGYTPESV EDITGVSASE IRQAARMYAQ AKSAAILWGM GVTQFYQGVE TVRSLTSLAM LTG NLGKPH AGVNPVRGQN NVQGACDMGA LPDTYPGYQY VKDPANREKF AKAWGVESLP AHTGYRISEL PHRAAHGEVR AAYI MGEDP LQTDAELSAV RKAFEDLELV IVQDIFMTKT ASAADVILPS TSWGEHEGVF TAADRGFQRF FKAVEPKWDL KTDWQ IISE IATRMGYPMH YNNTQEIWDE LRHLCPDFYG ATYEKMGELG FIQWPCRDTS DADQGTSYLF KEKFDTPNGL AQFFTC DWV APIDKLTDEY PMVLSTVREV GHYSCRSMTG NCAALAALAD EPGYAQINTE DAKRLGIEDE ALVWVHSRKG KIITRAQ VS DRPNKGAIYM TYQWWIGACN ELVTENLSPI TKTPEYKYCA VRVEPIADQR AAEQYVIDEY NKLKTRLREA ALA

UniProtKB: Formate dehydrogenase H

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Macromolecule #8: NICKEL (II) ION

MacromoleculeName: NICKEL (II) ION / type: ligand / ID: 8 / Number of copies: 1 / Formula: NI
Molecular weightTheoretical: 58.693 Da
Chemical component information

ChemComp-NI:
NICKEL (II) ION

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Macromolecule #9: CARBONMONOXIDE-(DICYANO) IRON

MacromoleculeName: CARBONMONOXIDE-(DICYANO) IRON / type: ligand / ID: 9 / Number of copies: 1 / Formula: FCO
Molecular weightTheoretical: 135.89 Da
Chemical component information

ChemComp-FCO:
CARBONMONOXIDE-(DICYANO) IRON

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Macromolecule #10: IRON/SULFUR CLUSTER

MacromoleculeName: IRON/SULFUR CLUSTER / type: ligand / ID: 10 / Number of copies: 8 / Formula: SF4
Molecular weightTheoretical: 351.64 Da
Chemical component information

ChemComp-FS1:
IRON/SULFUR CLUSTER

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Macromolecule #11: FE (III) ION

MacromoleculeName: FE (III) ION / type: ligand / ID: 11 / Number of copies: 1 / Formula: FE
Molecular weightTheoretical: 55.845 Da

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Macromolecule #12: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,1...

MacromoleculeName: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE
type: ligand / ID: 12 / Number of copies: 2 / Formula: MGD
Molecular weightTheoretical: 740.557 Da
Chemical component information

ChemComp-MGD:
2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE

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Macromolecule #13: MOLYBDENUM(VI) ION

MacromoleculeName: MOLYBDENUM(VI) ION / type: ligand / ID: 13 / Number of copies: 1 / Formula: 6MO
Molecular weightTheoretical: 95.94 Da

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Experimental details

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Structure determination

Methodcryo EM
Processingsingle particle reconstruction
Aggregation stateparticle

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Sample preparation

BufferpH: 7.5
GridModel: C-flat-2/1 / Material: COPPER / Pretreatment - Type: GLOW DISCHARGE
VitrificationCryogen name: ETHANE

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Electron microscopy

MicroscopeFEI TITAN KRIOS
Image recordingFilm or detector model: GATAN K2 SUMMIT (4k x 4k) / Detector mode: COUNTING / Average electron dose: 72.0 e/Å2
Electron beamAcceleration voltage: 300 kV / Electron source: FIELD EMISSION GUN
Electron opticsIllumination mode: FLOOD BEAM / Imaging mode: BRIGHT FIELD / Cs: 2.7 mm / Nominal defocus max: 2.2 µm / Nominal defocus min: 1.6 µm
Sample stageSpecimen holder model: FEI TITAN KRIOS AUTOGRID HOLDER
Experimental equipment
Model: Titan Krios / Image courtesy: FEI Company

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Image processing

Startup modelType of model: INSILICO MODEL
Final reconstructionResolution.type: BY AUTHOR / Resolution: 3.4 Å / Resolution method: OTHER / Software - Name: RELION (ver. 3)
Details: This is a composite map. The maps that constitute this composite map have resolutions between 3.0 and 3.4 A. These have all been determined by FSC 0.143 cut-off.
Number images used: 90459
Initial angle assignmentType: MAXIMUM LIKELIHOOD
Final angle assignmentType: MAXIMUM LIKELIHOOD / Software - Name: RELION (ver. 3)

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