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- ChemComp-ZGL: D-alpha-glutamine -

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Basic information

EntryDatabase: PDB chemical components / ID: ZGL
NameName: D-alpha-glutamine / Synonyms: Iso-D-glutamine

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Chemical information

Composition
Formula: C5H10N2O3 / Number of atoms: 20 / Formula weight: 146.144 / Formal charge: 0
Others

1loc

Type: D-peptide linking / PDB classification: ATOMP / Three letter code: ZGL / Ideal coordinates details: Corina / Model coordinates PDB-ID: 1LOC
History
Create componentOct 27, 2011
Modify synonymsJun 5, 2020
Modify backboneNov 3, 2023
External linksUniChem / ChemSpider / Wikipedia search / Google search

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Details

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SMILES

ACDLabs 12.01O=C(N)C(N)CCC(=O)O
CACTVS 3.370N[CH](CCC(O)=O)C(N)=O
OpenEye OEToolkits 1.7.2C(CC(=O)O)C(C(=O)N)N

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SMILES CANONICAL

CACTVS 3.370N[C@H](CCC(O)=O)C(N)=O
OpenEye OEToolkits 1.7.2C(CC(=O)O)[C@H](C(=O)N)N

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InChI

InChI 1.03InChI=1S/C5H10N2O3/c6-3(5(7)10)1-2-4(8)9/h3H,1-2,6H2,(H2,7,10)(H,8,9)/t3-/m1/s1

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InChIKey

InChI 1.03AEFLONBTGZFSGQ-GSVOUGTGSA-N

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SYSTEMATIC NAME

ACDLabs 12.01D-alpha-glutamine
OpenEye OEToolkits 1.7.2(4R)-4,5-bis(azanyl)-5-oxidanylidene-pentanoic acid

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PDB entries

Showing all 3 items

PDB-2ixu:
Crystal structure of the modular Cpl-1 endolysin complexed with a peptidoglycan analogue (wild-type endolysin)

PDB-4m6g:
Structure of the Mycobacterium tuberculosis peptidoglycan amidase Rv3717 in complex with L-Alanine-iso-D-Glutamine reaction product

PDB-7ago:
crystal structure of the N-acetylmuramyl-L-alanine amidase, Ami1, from Mycobacterium abscessus bound to L-Alanine-D-isoglutamine

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