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- ChemComp-T7X: Phosphatidylinositol -

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Basic information

EntryDatabase: PDB chemical components / ID: T7X
NameName: Phosphatidylinositol
WikipediaWikipedia - Phosphatidylinositol: Phosphatidylinositol consists of a family of lipids as illustrated on the right, where red is x, blue is y, and black is z, in the context of independent variation, a class of the phosphatidylglycerides. In such molecules the isomer of the inositol group is assumed to be the myo- conformer unless otherwise stated...

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Chemical information

Composition
Formula: C47H83O13P / Number of atoms: 144 / Formula weight: 887.128 / Formal charge: 0
Others

5hym

Type: NON-POLYMER / PDB classification: HETAIN / Three letter code: T7X / Ideal coordinates details: Corina / Model coordinates PDB-ID: 5HYM
History
Create componentFeb 2, 2016
Initial releaseFeb 1, 2017
External linksUniChem / ZINC / ChemSpider / Wikipedia search / Google search

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Details

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SMILES

ACDLabs 12.01C1(C(C(C(C(C1O)O)O)O)O)OP(OCC(OC(CCCC=[C@H]CC=[C@H]C[C@H]=CC\C=C\CCCCC)=O)COC(=O)CCCCCCCCCCCCCCCCC)(O)=O
CACTVS 3.385CCCCCCCCCCCCCCCCCC(=O)OC[CH](CO[P](O)(=O)O[CH]1[CH](O)[CH](O)[CH](O)[CH](O)[CH]1O)OC(=O)CCCC=CCC=CCC=CCC=CCCCCC
OpenEye OEToolkits 2.0.4CCCCCCCCCCCCCCCCCC(=O)OCC(COP(=O)(O)OC1C(C(C(C(C1O)O)O)O)O)OC(=O)CCCC=CCC=CCC=CCC=CCCCCC

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SMILES CANONICAL

CACTVS 3.385CCCCCCCCCCCCCCCCCC(=O)OC[C@H](CO[P](O)(=O)O[C@H]1[C@H](O)[C@@H](O)[C@H](O)[C@@H](O)[C@H]1O)OC(=O)CCC\C=C/C/C=C\C/C=C/C/C=C/CCCCC
OpenEye OEToolkits 2.0.4CCCCCCCCCCCCCCCCCC(=O)OC[C@H](COP(=O)(O)OC1[C@@H]([C@H](C([C@H]([C@H]1O)O)O)O)O)OC(=O)CCC/C=C\C/C=C\C/C=C/C/C=C/CCCCC

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InChI

InChI 1.03InChI=1S/C47H83O13P/c1-3-5-7-9-11-13-15-17-19-20-22-24-26-28-30-32-34-36-41(49)59-39(38-58-61(55,56)60-47-45(53)43(51)42(50)44(52)46(47)54)37-57-40(48)35-33-31-29-27-25-23-21-18-16-14-12-10-8-6-4-2/h11,13,17,19,22,24,28,30,39,42-47,50-54H,3-10,12,14-16,18,20-21,23,25-27,29,31-38H2,1-2H3,(H,55,56)/b13-11+,19-17+,24-22-,30-28-/t39-,42-,43-,44+,45-,46-,47-/m1/s1

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InChIKey

InChI 1.03KRTOMQDUKGRFDJ-TWUHCGEESA-N

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SYSTEMATIC NAME

ACDLabs 12.01(2R)-1-{[(R)-hydroxy{[(1S,2R,3R,4S,5S,6R)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}-3-(octadecanoyloxy)propan-2-yl (5Z,8Z,11E,14E)-icosa-5,8,11,14-tetraenoate
OpenEye OEToolkits 2.0.4[(2~{R})-1-octadecanoyloxy-3-[oxidanyl-[(2~{R},3~{S},5~{R},6~{R})-2,3,4,5,6-pentakis(oxidanyl)cyclohexyl]oxy-phosphoryl]oxy-propan-2-yl] (5~{Z},8~{Z},11~{E},14~{E})-icosa-5,8,11,14-tetraenoate

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PDB entries

Showing all 6 items

PDB-5hym:
3-Hydroxybenzoate 6-hydroxylase from Rhodococcus jostii in complex with phosphatidylinositol

PDB-6rfq:
Cryo-EM structure of a respiratory complex I assembly intermediate with NDUFAF2

PDB-6rfr:
Cryo-EM structure of respiratory complex I from Yarrowia lipolytica at 3.2 A resolution

PDB-6y79:
Cryo-EM structure of a respiratory complex I F89A mutant

PDB-7a23:
Plant mitochondrial respiratory complex I

PDB-7a24:
Assembly intermediate of the plant mitochondrial complex I

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