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Yorodumi- SASDFD4: Condensin complex subunit 3-like protein,Ycg1, bound to condensin... -
+Open data
-Basic information
Entry | Database: SASBDB / ID: SASDFD4 |
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Sample | Condensin complex subunit 3-like protein,Ycg1, bound to condensin complex subunit 2, Brn1 (Ycg1-Brn1)
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Function / homology | Function and homology information condensin complex / mitotic chromosome condensation / cell division / cytoplasm Similarity search - Function |
Biological species | Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) (fungus) |
Contact author |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Models
Model #2853 | Type: dummy / Software: (2.8.3) / Radius of dummy atoms: 1.70 A / Symmetry: P1 / Chi-square value: 0.684 / P-value: 0.003314 Search similar-shape structures of this assembly by Omokage search (details) |
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Model #2854 | Type: atomic / Symmetry: P1 / Chi-square value: 0.935 Search similar-shape structures of this assembly by Omokage search (details) |
-Sample
Sample | Name: Condensin complex subunit 3-like protein,Ycg1, bound to condensin complex subunit 2, Brn1 (Ycg1-Brn1) Specimen concentration: 0.50-5.00 / Entity id: 1511 / 1512 |
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Buffer | Name: 25 mM Tris 300 mM NaCl 1mM DTT / pH: 7.5 |
Entity #1511 | Name: Ycg1 / Type: protein / Description: Condensin complex subunit 3-like protein / Formula weight: 108.325 / Num. of mol.: 1 Source: Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) References: UniProt: G0SHK2 Sequence: PDNALRTQVT TVFREAQRTT ASHRKLVVTL RKIQEACCYE PATGQKQSGA AAALSEFDED DFNTEFVRCA LRILPVKKSE GVGEKTVRFV SLFLRHAIEK DNELLGDTQM DEDDADNSTM PETPSTRLTS HLMETILPML MAKDKFVRYR AAQLLAHIVN SLDAIDDDLY ...Sequence: PDNALRTQVT TVFREAQRTT ASHRKLVVTL RKIQEACCYE PATGQKQSGA AAALSEFDED DFNTEFVRCA LRILPVKKSE GVGEKTVRFV SLFLRHAIEK DNELLGDTQM DEDDADNSTM PETPSTRLTS HLMETILPML MAKDKFVRYR AAQLLAHIVN SLDAIDDDLY QKLRAGLLRR IHDKEPMVRA QAVLGLGRLA GNALDEEPGA GDSDLDGDDD GPGGASGVSL MDKLMDVMKN DPSADVRRTL LVNLPITPKT LPSLLERARD QDPATRRAVY SRLLPALGDF RHLSLSMREK LLRWGLRDRD ENVRKAAARL FRERWIEDCA GTPRPEPGQP IELSPPNMDA LLELLERIDV VNSGGENGIA LEAMRGFWEG RPDYRDAMVF DDHFFETLSA ESVFALRTFN DFCRNEAGGK YEALIEEKLP EVTKLAFYLE RYIKVLIDAI KRAEEQGEEE EEDTAEQEFI VEQLLHIALT LDYADEVGRR KMFALLRQTL SIPELPEECT KLTVMVLRDL CAPDAAGEKE FTSVVLEAVA DVHDTIVDED DDDANVPAED DESFVSARSE VSRESTPAPG GGEGGGSNSR KRGRSPTPKM TEEEAAAKAI REIMINMKCL HIVQCMLQNV QGQLQSNDNL ISMLNNLVVP AVRSHEAPVR ERGLVCLGLC ALLDRSLAEE NLTLFIHFFA KGHTALQITA LHILTDILVV HGAQLLSANP TLLKVYVKAL RSGAKHPELQ AVAVVAASKL LLGRVVSDRD VAAELLKTLV VAYFEPASAG NQSVRQALNY FLPVFCYSRA ENQDLMRRVA LDALHTLYNV REGFDDDDAD IDDEMVSLAT IGACLVDWTD PRKVYTPDAG GLQAEKHVNA DVHLDFAKAI LERLEGNVPR EEKKVLASLL SKLYISPASS PDKTRETYRV VSAAVDTNLL PDTTSRNALY KIHVSLGKIV NALDGAVPSV ETASVAGSTG TGIGTTTTAA TGR |
Entity #1512 | Name: Brn1 / Type: protein / Description: Condensin complex subunit 2 / Formula weight: 17 / Num. of mol.: 1 Source: Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) References: UniProt: G0SBJ6 Sequence: KIHEDILSYF DQALQKNWTS AEHWRIRKIK DVNKPNEPTR QRKEKQPFEI DFVSPLDKAL AEIIYTKASS NATISMPKKD WKSKTKNLLP DDKHFSSKQL LSLFLKPKAR MGRRRVLKTS |
-Experimental information
Beam | Instrument name: PETRA III EMBL P12 / City: Hamburg / 国: Germany / Type of source: X-ray synchrotronSynchrotron / Wavelength: 0.124 Å / Dist. spec. to detc.: 4 mm | |||||||||||||||||||||||||||||||||
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Detector | Name: Pilatus 2M | |||||||||||||||||||||||||||||||||
Scan | Title: Condensin complex subunit 3-like protein,Ycg1, bound to condensin complex subunit 2, Brn1 (Ycg1-Brn1) Measurement date: Oct 20, 2016 / Storage temperature: 13 °C / Cell temperature: 10 °C / Exposure time: 0.05 sec. / Number of frames: 20 / Unit: 1/nm /
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Distance distribution function P(R) | Sofotware P(R): GNOM 5.0 / Number of points: 886 /
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Result | Type of curve: merged
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