+Open data
-Basic information
Entry | Database: SASBDB / ID: SASDDL6 |
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Sample | Calcium Loaded Calbindin-D28K
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Function / homology | Function and homology information metanephric connecting tubule development / calcium ion binding involved in regulation of presynaptic cytosolic calcium ion concentration / calcium ion binding involved in regulation of postsynaptic cytosolic calcium ion concentration / metanephric distal convoluted tubule development / cuticular plate / metanephric part of ureteric bud development / retina layer formation / regulation of presynaptic cytosolic calcium ion concentration / vitamin D binding / short-term memory ...metanephric connecting tubule development / calcium ion binding involved in regulation of presynaptic cytosolic calcium ion concentration / calcium ion binding involved in regulation of postsynaptic cytosolic calcium ion concentration / metanephric distal convoluted tubule development / cuticular plate / metanephric part of ureteric bud development / retina layer formation / regulation of presynaptic cytosolic calcium ion concentration / vitamin D binding / short-term memory / stereocilium / metanephric collecting duct development / presynaptic cytosol / regulation of long-term synaptic potentiation / postsynaptic cytosol / cellular response to organic substance / cochlea development / calyx of Held / GABA-ergic synapse / long-term memory / hippocampal mossy fiber to CA3 synapse / locomotory behavior / terminal bouton / dendritic spine / Amyloid fiber formation / axon / neuronal cell body / dendrite / synapse / glutamatergic synapse / calcium ion binding / extracellular exosome / zinc ion binding / nucleus / cytosol Similarity search - Function |
Biological species | Homo sapiens (human) |
Citation | Date: 2018 Oct 1 Title: The X-ray structure of human calbindin-D28K: an improved model Authors: Noble J / Almalki R / Roe S / Wagner A / Duman R |
Contact author |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Models
Model #2022 | Type: atomic / Chi-square value: 1.41108463553 Search similar-shape structures of this assembly by Omokage search (details) |
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Model #2023 | Type: atomic / Comment: modle 2 selected / Chi-square value: 3.9916402966 Search similar-shape structures of this assembly by Omokage search (details) |
-Sample
Sample | Name: Calcium Loaded Calbindin-D28K / Specimen concentration: 11.5 mg/ml |
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Buffer | Name: 20 mM Tris, 150 mM NaCl, 3 mM CaCl2 / pH: 7.8 |
Entity #1078 | Name: CALB1 / Type: protein / Description: Calbindin / Formula weight: 30.316 / Num. of mol.: 1 / Source: Homo sapiens / References: UniProt: P05937 Sequence: GPHMAESHLQ SSLITASQFF EIWLHFDADG SGYLEGKELQ NLIQELQQAR KKAGLELSPE MKTFVDQYGQ RDDGKIGIVE LAHVLPTEEN FLLLFRCQQL KSCEEFMKTW RKYDTDHSGF IETEELKNFL KDLLEKANKT VDDTKLAEYT DLMLKLFDSN NDGKLELTEM ...Sequence: GPHMAESHLQ SSLITASQFF EIWLHFDADG SGYLEGKELQ NLIQELQQAR KKAGLELSPE MKTFVDQYGQ RDDGKIGIVE LAHVLPTEEN FLLLFRCQQL KSCEEFMKTW RKYDTDHSGF IETEELKNFL KDLLEKANKT VDDTKLAEYT DLMLKLFDSN NDGKLELTEM ARLLPVQENF LLKFQGIKMC GKEFNKAFEL YDQDGNGYID ENELDALLKD LCEKNKQDLD INNITTYKKN IMALSDGGKL YRTDLALILC AGDN |
-Experimental information
Beam | Instrument name: Diamond Light Source B21 / City: Oxfordshire / 国: UK / Shape: 1 x 5 mm / Type of source: X-ray synchrotronSynchrotron / Wavelength: 0.1 Å / Dist. spec. to detc.: 4 mm | ||||||||||||||||||||||||||||||
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Detector | Name: Pilatus 2M | ||||||||||||||||||||||||||||||
Scan | Title: Calcium Loaded Calbindin-D28K / Measurement date: Feb 28, 2018 / Storage temperature: 4 °C / Cell temperature: 25 °C / Exposure time: 3 sec. / Number of frames: 15 / Unit: 1/A /
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Distance distribution function P(R) | Sofotware P(R): GNOM 4.5a / Number of points: 396 /
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Result | Type of curve: sec /
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