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- ChemComp-ONH: N~5~-hydroxy-L-ornithine -

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Basic information

EntryDatabase: PDB chemical components / ID: ONH
NameName: N~5~-hydroxy-L-ornithine

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Chemical information

Composition
Formula: C5H12N2O3 / Number of atoms: 22 / Formula weight: 148.16 / Formal charge: 0
Others

3s5w

ALA

Type: L-peptide linking / PDB classification: ATOMP / One letter code: A / Three letter code: ONH / Ideal coordinates details: Corina / Model coordinates PDB-ID: 3S5W / Parent comp.: ALA
History
Create componentJun 2, 2011
Modify descriptorJun 4, 2011
External linksUniChem / ChemSpider / Wikipedia search / Google search

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Details

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SMILES

ACDLabs 12.01O=C(O)C(N)CCCNO
CACTVS 3.370N[CH](CCCNO)C(O)=O
OpenEye OEToolkits 1.7.2C(CC(C(=O)O)N)CNO

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SMILES CANONICAL

CACTVS 3.370N[C@@H](CCCNO)C(O)=O
OpenEye OEToolkits 1.7.2C(C[C@@H](C(=O)O)N)CNO

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InChI

InChI 1.03InChI=1S/C5H12N2O3/c6-4(5(8)9)2-1-3-7-10/h4,7,10H,1-3,6H2,(H,8,9)/t4-/m0/s1

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InChIKey

InChI 1.03OZMJDTPATROLQC-BYPYZUCNSA-N

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SYSTEMATIC NAME

ACDLabs 12.01N~5~-hydroxy-L-ornithine
OpenEye OEToolkits 1.7.2(2S)-2-azanyl-5-(oxidanylamino)pentanoic acid

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PDB entries

Showing all 6 items

PDB-3s5w:
Ornithine Hydroxylase (PvdA) from Pseudomonas aeruginosa

PDB-9ebm:
Piperazate synthase (PipS) in complex with haem and N5-OH-L-ornithine

PDB-9jn5:
Crystal structure of KtzT-C197A in complex with HEME and substrate

PDB-9oqt:
N-hydroxylamine dehydratase (NohD) T98A/K167A mutant crystal structure with heme and N-hydroxylated ornithine (2.5h soak)

PDB-9oqu:
N-hydroxylamine dehydratase (NohD) T98A/K167A mutant crystal structure with heme and N-hydroxylated ornithine (5h soak)

PDB-9or1:
N-hydroxylamine dehydratase (NohD) H2F/F4P/P5S/R6Y/A59N/R144Y/V96A/D172E/L172Q/D173P/R176V (P1/P2/A1/A2/A3) mutant crystal structure with heme and N-hydroxylated ornithine

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