National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)
R01GM118396
米国
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)
T32GM008268
米国
引用
ジャーナル: J Comput Chem / 年: 2004 タイトル: UCSF Chimera--a visualization system for exploratory research and analysis. 著者: Eric F Pettersen / Thomas D Goddard / Conrad C Huang / Gregory S Couch / Daniel M Greenblatt / Elaine C Meng / Thomas E Ferrin / 要旨: The design, implementation, and capabilities of an extensible visualization system, UCSF Chimera, are discussed. Chimera is segmented into a core that provides basic services and visualization, and ...The design, implementation, and capabilities of an extensible visualization system, UCSF Chimera, are discussed. Chimera is segmented into a core that provides basic services and visualization, and extensions that provide most higher level functionality. This architecture ensures that the extension mechanism satisfies the demands of outside developers who wish to incorporate new features. Two unusual extensions are presented: Multiscale, which adds the ability to visualize large-scale molecular assemblies such as viral coats, and Collaboratory, which allows researchers to share a Chimera session interactively despite being at separate locales. Other extensions include Multalign Viewer, for showing multiple sequence alignments and associated structures; ViewDock, for screening docked ligand orientations; Movie, for replaying molecular dynamics trajectories; and Volume Viewer, for display and analysis of volumetric data. A discussion of the usage of Chimera in real-world situations is given, along with anticipated future directions. Chimera includes full user documentation, is free to academic and nonprofit users, and is available for Microsoft Windows, Linux, Apple Mac OS X, SGI IRIX, and HP Tru64 Unix from http://www.cgl.ucsf.edu/chimera/.
超分子 #1: Filament of Inosine-5'-monophosphate dehydrogenase 2 - L245P muta...
超分子
名称: Filament of Inosine-5'-monophosphate dehydrogenase 2 - L245P mutant, bound to GTP, ATP, IMP, and NAD+ タイプ: complex / ID: 1 / 親要素: 0 / 含まれる分子: #1 詳細: 5 uM enzyme was mixed with 20 mM GTP, 1 mM ATP, 1 mM MgCl2, 3 mM IMP, and 5 mM NAD+.