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- EMDB-23082: Outer dynein arm bound to doublet microtubules from C. reinhardtii -

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IDまたはキーワード:

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基本情報

登録情報
データベース: EMDB / ID: EMD-23082
タイトルOuter dynein arm bound to doublet microtubules from C. reinhardtii
マップデータComposite map of the complete ODA complex bound to doublet microtubules
試料
  • 複合体: ODA complex
    • タンパク質・ペプチド: x 20種
  • リガンド: x 3種
キーワードdynein / microtubule / cilia / MOTOR PROTEIN
機能・相同性
機能・相同性情報


outer dynein arm / outer dynein arm assembly / cilium movement involved in cell motility / 9+2 motile cilium / dynein light chain binding / cilium movement / motile cilium assembly / dynein heavy chain binding / axonemal dynein complex / dynein complex ...outer dynein arm / outer dynein arm assembly / cilium movement involved in cell motility / 9+2 motile cilium / dynein light chain binding / cilium movement / motile cilium assembly / dynein heavy chain binding / axonemal dynein complex / dynein complex / cell projection organization / minus-end-directed microtubule motor activity / dynein light intermediate chain binding / cytoplasmic dynein complex / ciliary plasm / motile cilium / dynein intermediate chain binding / microtubule-based movement / axoneme / microtubule-based process / enzyme regulator activity / 加水分解酵素; 酸無水物に作用; GTPに作用・細胞または細胞小器官の運動に関与 / structural constituent of cytoskeleton / microtubule cytoskeleton organization / mitotic cell cycle / microtubule / hydrolase activity / GTPase activity / calcium ion binding / GTP binding / ATP hydrolysis activity / ATP binding / metal ion binding / cytoplasm
類似検索 - 分子機能
: / ODAD1 central coiled coil region / Kelch repeat type 2 / Kelch motif / Dynein light chain roadblock-type 1/2 / Galactose oxidase, central domain / Dynein light chain Tctex-1 like / Tctex-1-like superfamily / Tctex-1 family / Phospholipase D/Transphosphatidylase ...: / ODAD1 central coiled coil region / Kelch repeat type 2 / Kelch motif / Dynein light chain roadblock-type 1/2 / Galactose oxidase, central domain / Dynein light chain Tctex-1 like / Tctex-1-like superfamily / Tctex-1 family / Phospholipase D/Transphosphatidylase / Phospholipase D phosphodiesterase active site profile. / Dynein light chain, type 1/2, conserved site / Dynein light chain type 1 signature. / Dynein light chain type 1 / Dynein light chain, type 1/2 / Dynein light chain superfamily / Dynein light chain type 1 / Dynein heavy chain, AAA 5 extension domain / Dynein heavy chain AAA lid domain / Roadblock/LAMTOR2 domain / Roadblock/LC7 domain / Roadblock/LC7 domain / Dynein heavy chain 3, AAA+ lid domain / AAA+ lid domain / Filamin/ABP280 repeat / Filamin-type immunoglobulin domains / Dynein heavy chain, C-terminal domain / Dynein heavy chain, C-terminal domain, barrel region / Dynein heavy chain C-terminal domain / Galactose oxidase/kelch, beta-propeller / Filamin/ABP280 repeat / Filamin/ABP280 repeat profile. / Filamin/ABP280 repeat-like / P-loop containing dynein motor region / Dynein heavy chain, tail / Dynein heavy chain, N-terminal region 1 / Dynein heavy chain / Dynein heavy chain region D6 P-loop domain / Dynein heavy chain, linker / Dynein heavy chain, AAA module D4 / Dynein heavy chain, coiled coil stalk / Dynein heavy chain, hydrolytic ATP-binding dynein motor region / Dynein heavy chain, ATP-binding dynein motor region / Dynein heavy chain AAA lid domain / Dynein heavy chain AAA lid domain superfamily / Dynein heavy chain, domain 2, N-terminal / Dynein heavy chain, linker, subdomain 3 / Dynein heavy chain, AAA1 domain, small subdomain / Dynein heavy chain region D6 P-loop domain / Dynein heavy chain, N-terminal region 2 / Hydrolytic ATP binding site of dynein motor region / Microtubule-binding stalk of dynein motor / P-loop containing dynein motor region D4 / ATP-binding dynein motor region / Dynein heavy chain AAA lid domain / IPT/TIG domain / Kelch-type beta propeller / IPT domain / Tubulin-beta mRNA autoregulation signal. / Alpha tubulin / Beta tubulin, autoregulation binding site / Beta tubulin / Tubulin / Tubulin, C-terminal / Tubulin C-terminal domain / Tubulin, conserved site / Tubulin subunits alpha, beta, and gamma signature. / Tubulin/FtsZ family, C-terminal domain / Tubulin/FtsZ-like, C-terminal domain / Tubulin/FtsZ, C-terminal / Tubulin/FtsZ, 2-layer sandwich domain / Tubulin/FtsZ family, GTPase domain / Tubulin/FtsZ family, GTPase domain / Tubulin/FtsZ, GTPase domain / Tubulin/FtsZ, GTPase domain superfamily / EF-hand domain pair / EF-hand, calcium binding motif / EF-Hand 1, calcium-binding site / EF-hand calcium-binding domain. / EF-hand calcium-binding domain profile. / EF-hand domain / EF-hand domain pair / Immunoglobulin E-set / Trp-Asp (WD) repeats circular profile. / WD domain, G-beta repeat / WD40 repeats / WD40 repeat / WD40-repeat-containing domain superfamily / WD40/YVTN repeat-like-containing domain superfamily / ATPases associated with a variety of cellular activities / AAA+ ATPase domain / Immunoglobulin-like fold / P-loop containing nucleoside triphosphate hydrolase
類似検索 - ドメイン・相同性
PLD phosphodiesterase domain-containing protein / Uncharacterized protein / Dynein light chain roadblock / Uncharacterized protein / Dynein light chain / Outer dynein arm protein 1 / Mr19,000 outer arm dynein light chain / Tubulin beta-1/beta-2 chain / Tubulin alpha-1 chain / Dynein, 70 kDa intermediate chain, flagellar outer arm ...PLD phosphodiesterase domain-containing protein / Uncharacterized protein / Dynein light chain roadblock / Uncharacterized protein / Dynein light chain / Outer dynein arm protein 1 / Mr19,000 outer arm dynein light chain / Tubulin beta-1/beta-2 chain / Tubulin alpha-1 chain / Dynein, 70 kDa intermediate chain, flagellar outer arm / Dynein light chain 9 / Dynein gamma chain, flagellar outer arm / Dynein, 78 kDa intermediate chain, flagellar outer arm / Dynein 11 kDa light chain, flagellar outer arm / Dynein 8 kDa light chain, flagellar outer arm / Dynein 18 kDa light chain, flagellar outer arm / Outer dynein arm-docking complex protein DC3 / Dynein light chain roadblock
類似検索 - 構成要素
生物種Chlamydomonas reinhardtii (クラミドモナス)
手法らせん対称体再構成法 / クライオ電子顕微鏡法 / 解像度: 7.5 Å
データ登録者Walton T / Wu H
引用ジャーナル: Nat Commun / 年: 2021
タイトル: Structure of a microtubule-bound axonemal dynein.
著者: Travis Walton / Hao Wu / Alan Brown /
要旨: Axonemal dyneins are tethered to doublet microtubules inside cilia to drive ciliary beating, a process critical for cellular motility and extracellular fluid flow. Axonemal dyneins are evolutionarily ...Axonemal dyneins are tethered to doublet microtubules inside cilia to drive ciliary beating, a process critical for cellular motility and extracellular fluid flow. Axonemal dyneins are evolutionarily and biochemically distinct from cytoplasmic dyneins that transport cargo, and the mechanisms regulating their localization and function are poorly understood. Here, we report a single-particle cryo-EM reconstruction of a three-headed axonemal dynein natively bound to doublet microtubules isolated from cilia. The slanted conformation of the axonemal dynein causes interaction of its motor domains with the neighboring dynein complex. Our structure shows how a heterotrimeric docking complex specifically localizes the linear array of axonemal dyneins to the doublet microtubule by directly interacting with the heavy chains. Our structural analysis establishes the arrangement of conserved heavy, intermediate and light chain subunits, and provides a framework to understand the roles of individual subunits and the interactions between dyneins during ciliary waveform generation.
履歴
登録2020年12月10日-
ヘッダ(付随情報) 公開2021年1月20日-
マップ公開2021年1月20日-
更新2024年3月6日-
現状2024年3月6日処理サイト: RCSB / 状態: 公開

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構造の表示

ムービー
  • 表面図（断面を密度値に従い着色）
  • 表面レベル: 0.01
  • UCSF Chimeraによる作画
  • ダウンロード
  • 表面図（円筒半径に従い着色）
  • 表面レベル: 0.01
  • UCSF Chimeraによる作画
  • ダウンロード
  • あてはめたモデルとの重ね合わせ
  • 原子モデル: PDB-7kzm
  • 表面レベル: 0.01
  • UCSF Chimeraによる作画
  • ダウンロード
  • 単純化した表面モデル + あてはめた原子モデル
  • 原子モデルPDB-7kzm
  • Jmolによる作画
  • ダウンロード
ムービービューア
構造ビューアEMマップ:
SurfViewMolmilJmol/JSmol
添付画像

emd_23082.png

ダウンロードとリンク

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マップ

ファイルダウンロード / ファイル: emd_23082.map.gz / 形式: CCP4 / 大きさ: 1.3 GB / タイプ: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
注釈Composite map of the complete ODA complex bound to doublet microtubules
ボクセルのサイズX=Y=Z: 1.36 Å
密度
表面レベル登録者による: 0.01 / ムービー #1: 0.01
最小 - 最大0.0 - 0.0934868
平均 (標準偏差)0.000059890812 (±0.0008412539)
対称性空間群: 1
詳細

EMDB XML:

マップ形状
Axis orderXYZ
Origin000
サイズ700700700
Spacing700700700
セルA=B=C: 952.0 Å
α=β=γ: 90.0 °

CCP4マップ ヘッダ情報:

modeImage stored as Reals
Å/pix. X/Y/Z1.361.361.36
M x/y/z700700700
origin x/y/z0.0000.0000.000
length x/y/z952.000952.000952.000
α/β/γ90.00090.00090.000
start NX/NY/NZ000
NX/NY/NZ180180180
MAP C/R/S123
start NC/NR/NS000
NC/NR/NS700700700
D min/max/mean0.0000.0930.000

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添付データ

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追加マップ: Half map 2 for full ODA map containing two adjacent complexes.

ファイルemd_23082_additional_1.map
注釈Half map 2 for full ODA map containing two adjacent complexes.
投影像・断面図
軸ZYX

投影像

断面 (1/2)
密度ヒストグラム

ヒストグラム

ヒストグラム (対数)

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追加マップ: Half map 1 for full ODA map containing two adjacent complexes.

ファイルemd_23082_additional_2.map
注釈Half map 1 for full ODA map containing two adjacent complexes.
投影像・断面図
軸ZYX

投影像

断面 (1/2)
密度ヒストグラム

ヒストグラム

ヒストグラム (対数)

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追加マップ: Full ODA map containing two adjacent complexes.

ファイルemd_23082_additional_3.map
注釈Full ODA map containing two adjacent complexes.
投影像・断面図
軸ZYX

投影像

断面 (1/2)
密度ヒストグラム

ヒストグラム

ヒストグラム (対数)

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追加マップ: Map of heavy chain beta AAA motor domain, class 1.

ファイルemd_23082_additional_4.map
注釈Map of heavy chain beta AAA motor domain, class 1.
投影像・断面図
軸ZYX

投影像

断面 (1/2)
密度ヒストグラム

ヒストグラム

ヒストグラム (対数)

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追加マップ: Map of heavy chain gamma AAA motor domain.

ファイルemd_23082_additional_5.map
注釈Map of heavy chain gamma AAA motor domain.
投影像・断面図
軸ZYX

投影像

断面 (1/2)
密度ヒストグラム

ヒストグラム

ヒストグラム (対数)

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追加マップ: Map of heavy chain alpha tail region.

ファイルemd_23082_additional_6.map
注釈Map of heavy chain alpha tail region.
投影像・断面図
軸ZYX

投影像

断面 (1/2)
密度ヒストグラム

ヒストグラム

ヒストグラム (対数)

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追加マップ: Map of heavy chain alpha AAA motor domain.

ファイルemd_23082_additional_7.map
注釈Map of heavy chain alpha AAA motor domain.
投影像・断面図
軸ZYX

投影像

断面 (1/2)
密度ヒストグラム

ヒストグラム

ヒストグラム (対数)

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追加マップ: Map of heavy chain beta AAA motor domain, class 2.

ファイルemd_23082_additional_8.map
注釈Map of heavy chain beta AAA motor domain, class 2.
投影像・断面図
軸ZYX

投影像

断面 (1/2)
密度ヒストグラム

ヒストグラム

ヒストグラム (対数)

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試料の構成要素

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全体 : ODA complex

全体名称: ODA complex
要素
  • 複合体: ODA complex
    • タンパク質・ペプチド: Tubulin beta
    • タンパク質・ペプチド: Tubulin alpha
    • タンパク質・ペプチド: Heavy chain alpha
    • タンパク質・ペプチド: Flagellar outer dynein arm heavy chain beta
    • タンパク質・ペプチド: Dynein gamma chain, flagellar outer arm
    • タンパク質・ペプチド: Dynein, 78 kDa intermediate chain, flagellar outer arm
    • タンパク質・ペプチド: Dynein, 70 kDa intermediate chain, flagellar outer arm
    • タンパク質・ペプチド: Flagellar outer dynein arm light chain 2
    • タンパク質・ペプチド: Dynein 18 kDa light chain, flagellar outer arm
    • タンパク質・ペプチド: Dynein 11 kDa light chain, flagellar outer arm
    • タンパク質・ペプチド: Dynein light chain roadblock LC7a
    • タンパク質・ペプチド: Dynein light chain roadblock LC7b
    • タンパク質・ペプチド: Dynein 8 kDa light chain, flagellar outer arm
    • タンパク質・ペプチド: Dynein light chain 9
    • タンパク質・ペプチド: Dynein light chain 10
    • タンパク質・ペプチド: Outer dynein arm-docking complex subunit 1
    • タンパク質・ペプチド: DC1
    • タンパク質・ペプチド: Outer dynein arm protein 1
    • タンパク質・ペプチド: DC2
    • タンパク質・ペプチド: Outer dynein arm-docking complex protein DC3
  • リガンド: GUANOSINE-5'-TRIPHOSPHATE
  • リガンド: MAGNESIUM ION
  • リガンド: GUANOSINE-5'-DIPHOSPHATE

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超分子 #1: ODA complex

超分子名称: ODA complex / タイプ: complex / ID: 1 / 親要素: 0 / 含まれる分子: #1-#20
詳細: ODA complex natively bound to doublet microtubules from C. reinhardtii
由来(天然)生物種: Chlamydomonas reinhardtii (クラミドモナス)

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分子 #1: Tubulin beta

分子名称: Tubulin beta / タイプ: protein_or_peptide / ID: 1 / コピー数: 8 / 光学異性体: LEVO
由来(天然)生物種: Chlamydomonas reinhardtii (クラミドモナス)
分子量理論値: 49.665809 KDa
配列文字列: MREIVHIQGG QCGNQIGAKF WEVVSDEHGI DPTGTYHGDS DLQLERINVY FNEATGGRYV PRAILMDLEP GTMDSVRSGP YGQIFRPDN FVFGQTGAGN NWAKGHYTEG AELIDSVLDV VRKEAESCDC LQGFQVCHSL GGGTGSGMGT LLISKIREEY P DRMMLTFS ...文字列:
MREIVHIQGG QCGNQIGAKF WEVVSDEHGI DPTGTYHGDS DLQLERINVY FNEATGGRYV PRAILMDLEP GTMDSVRSGP YGQIFRPDN FVFGQTGAGN NWAKGHYTEG AELIDSVLDV VRKEAESCDC LQGFQVCHSL GGGTGSGMGT LLISKIREEY P DRMMLTFS VVPSPKVSDT VVEPYNATLS VHQLVENADE CMVLDNEALY DICFRTLKLT TPTFGDLNHL ISAVMSGITC CL RFPGQLN ADLRKLAVNL IPFPRLHFFM VGFTPLTSRG SQQYRALTVP ELTQQMWDAK NMMCAADPRH GRYLTASALF RGR MSTKEV DEQMLNVQNK NSSYFVEWIP NNVKSSVCDI PPKGLKMSAT FIGNSTAIQE MFKRVSEQFT AMFRRKAFLH WYTG EGMDE MEFTEAESNM NDLVSEYQQY QDASAEEEGE FEGEEEEA

UniProtKB: Tubulin beta-1/beta-2 chain

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分子 #2: Tubulin alpha

分子名称: Tubulin alpha / タイプ: protein_or_peptide / ID: 2 / コピー数: 6 / 光学異性体: LEVO
由来(天然)生物種: Chlamydomonas reinhardtii (クラミドモナス)
分子量理論値: 49.638008 KDa
配列文字列: MREVISIHIG QAGIQVGNAC WELYCLEHGI QPDGQMPSDK TIGGGDDAFN TFFSETGAGK HVPRCIFLDL EPTVVDEVRT GTYRQLFHP EQLISGKEDA ANNFARGHYT IGKEIVDLAL DRIRKLADNC TGLQGFLVFN AVGGGTGSGL GSLLLERLSV D YGKKSKLG ...文字列:
MREVISIHIG QAGIQVGNAC WELYCLEHGI QPDGQMPSDK TIGGGDDAFN TFFSETGAGK HVPRCIFLDL EPTVVDEVRT GTYRQLFHP EQLISGKEDA ANNFARGHYT IGKEIVDLAL DRIRKLADNC TGLQGFLVFN AVGGGTGSGL GSLLLERLSV D YGKKSKLG FTVYPSPQVS TAVVEPYNSV LSTHSLLEHT DVAVMLDNEA IYDICRRSLD IERPTYTNLN RLIAQVISSL TA SLRFDGA LNVDITEFQT NLVPYPRIHF MLSSYAPIIS AEKAYHEQLS VAEITNAAFE PASMMVKCDP RHGKYMACCL MYR GDVVPK DVNASVATIK TKRTIQFVDW CPTGFKCGIN YQPPTVVPGG DLAKVQRAVC MISNSTAIGE IFSRLDHKFD LMYA KRAFV HWYVGEGMEE GEFSEAREDL AALEKDFEEV GAESAEGAGE GEGEEY

UniProtKB: Tubulin alpha-1 chain

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分子 #3: Heavy chain alpha

分子名称: Heavy chain alpha / タイプ: protein_or_peptide / ID: 3 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chlamydomonas reinhardtii (クラミドモナス)
分子量理論値: 504.949312 KDa
配列文字列: MSIFWEVPNA QGEAPCPRSG HSFTVLGERF VLFGGCGRKD GKAAAFNDLY ELDTSDPDEY KWKELVVANA PPPRARHAAI ALDDKRLLV FGGLNKRIRY NDVWLFNYDD KSWTCMEVEG AAPEPRAHFT ATRFGSRVFI FGGYGGSGQV YNEMWVLHFG E DGFRWQNI ...文字列:
MSIFWEVPNA QGEAPCPRSG HSFTVLGERF VLFGGCGRKD GKAAAFNDLY ELDTSDPDEY KWKELVVANA PPPRARHAAI ALDDKRLLV FGGLNKRIRY NDVWLFNYDD KSWTCMEVEG AAPEPRAHFT ATRFGSRVFI FGGYGGSGQV YNEMWVLHFG E DGFRWQNI TESIEGTGPA PRFDHSAFIY PVTPNSDTYD KLLIMGGRDL SQMYQDSHML DLNKMAWENE TQPPTLPYEI CN NVCDGIE SVPYHKVFSF GGRKGMMQYL NTVEVMDCGS QMWSTPPVDH GVAPVGREDT AWVFDVKTCS LLIFGGWANR WLG DLHKLN VSPIIGPPYA CTAIQPEMGP VFGSTELVIR GLRFRDGKVQ VKFGLSEKNE VVVEGTYVDQ ETIRVQTPNY EQFG ALTVD VRVSINGEGW TVNKIKYAYF ANTAARNCIA YGPGLLAETI SGVEVPFIIQ AKDTLNDKRT SGGDVFKVTV VSADG KNEG VSRVRDLQNG QYEVQYAAPT AGPYLIHVAF NELGTSDFVP IRGSPFTVKC TDSWTKHRVM GAAPAKRKGA TICTMG NEL VLYGGDKSGV TVLNTEGAEW RWSPATVSGS TPPDRTAHST VVLSDGELVV FGGINLADQN DLNDIYYLRK QGEGWVW SC PSESRPYIRH PKGAAAVSAE PSAEPAAEPA AEPAAEPDAD APAAEPAAEG EEGAVPAEGE EGAEGASGSR PVSAKPAP A AAAPAAEALP ELPVSARNSH VAVAIDKDLY VMMGDHDGDL MTELAMVDTS DRTCAHWLEP ILKGDVPVPR KACAAAATG NTIVLFGGQT QNADGEATVT GDLVIMEVTG PNSIQCAVNP AAPGASGSPA ARYGAVMQEF SNGKLFLHGG MDAASKPLND GWLFDVPSK TWQCVYVGSS DVVLPTGSLA TLWRNRIVLV SAAVGSPKLD SVQSLDFQEL RDSVAFTPKM RASTETLLKG L EDWVDTQA HGMELARSPE KLSKDFENGL RKVMDALFQV KSQRSQTDLL IDQLHEAFAQ LAEEKVPGIN KMEKRLEAAA HK WDEIKKA QPQVKTDVEP IQAAKGEDIK KEIETFAAKV RNYRADFRRR GFFKYATGFD GAYPLLDAAA HELAELKKEC DRL SELASV FEFPQAIEPV TVAIKETVED LVMVKDVWDT AVLCELQFQD WRQTLWSDIR TDIMEEGAKQ FVKEVKSLHK KVRD EDVFR GVDQVVKNFL VSVPLVADLR SPAMRDRHWE QLMATTKMTF NVKDPNFKLD DLLALELHKF EEEVGEIVDR AQKEE KMEI AIRKLNDTWT RVEFQFHRHK DYDVHTVKMA EEDFEALEDN QVQVQGMIAN RYMATFKDEI LGWQKKLNDV ADVNQI MAE IQRTWAYLES LFIHSEEVKK ELPQATERFA AIDTEVKKVL REFQQLKNCV SCCNREGLYA NLETQERELE ICKKALN DY MESKRRAFPR FYFVSSADLL DILSNGNNPM RVQIHMNKCF QAIDKLRLDS EEVVPGRRPK ALGMESCVGI EYVPFSSP L PLENKVEQYM NDIIAKMRNE LRMVLKASVE DYPSKPRDKW LFDWPSQIIL VVNQIYWCLE VEQAFTEMAR GDKGAMSKY NEFQVKQLTK LIEVTRTDLS KPDRQKIMNM ITIDAHSRDM VLAVIEAGAD QPDSFQWVSQ LRSYWDRDIS DCRIRICDAS FPYGYEYLG NGPRLVITPL TDRIYITATQ ACWLSLGTAP AGPAGTGKTE TTKDLSAQLG KSVYVFNCSP EMDYRTMGDI F KGLAASGS WGCFDEFNRL VPEVLSVCSV QYKCVTDSQK KKTMLPGRGL EYIKDGVKHP AVEHWSFIAA DGVEMPLEEG TS AFITMNP GYIGRAELPE SLKALFRPIT VMVPDRQLIM ENMLMAEGFV EAKMLAKKFA SLYYLLEDLL SPQKHYDWGL RAI KSVLVV AGSLLRAEAG QVEADVLFRA LRDFNIPKIL AQDMVIFMGL LNDLFPGIDP PRKRDMEFED VIVSTIKDLG LTPE DDFVL RVVQFSELLA IRHCVFLMGP TGTGRTECYR VLAKAITKGC NNPVNDYLKM TNKKKVVIRD INPKSISTYE LYGQV NQAT REWKDGLLSY YMRELANMPG DDPKWLLLDG DLDANWIESM NSVMDDNRLL TLPSNERIRV LPHMKLIFEI RDLKFA TPA TATRAGILYI SEGQQWHNMA MSWINRVVKP YAERAKWKDP QLPCTWLREM FDKYIPPTLL EMKKSYSHIT PLAQMNF IS TLVNIMEGVL KPENLSNKAD QAMFEMYFVF AMIWAFGGGL VEKDGIPYRR NFDKWFKQTW TTVKIPGKGT VYDYFVNP K TQKFQPWAEL VTDIDYDGSR PMSTVFVPTA ETSSLRFFLD MMVDLRKPIM FVGGAGVGKT QLVKGKLGSL NEEQISLSI SFNYFTDVVS FQKVLESPLE KKAGINYGPP GTKQLIYFVD DLNMPKLDLY ETAMPISLIR QHLGWGHWFD RAKLTPKNIN NTQYVACMN PTAGSFIINP RLQRLFMTLA VDFPGQDSLM KIYGTFLQGH LKKFSESIQD MGTKILQAAL ALHDRVSQTF R KTAINFHY EFTVRHLANV FQGLLMSTPE AFNSPTKWGK LWLHESERVY ADRLVSLYDL DAYNKAATAI AKKYFSVADI DD YYKKKDP KPLIFCHFAR GLADKAYDEV ADYTSLYKTL TEALNEYNET NAAMDLVLFE DAMKHVCRIS RIVSNPSGHA LLV GVGGSG KQSLARLAAH ICGYATQMIV ISGSYSMNNF KEDIQKMYKR TGVKGEGVMF LFTDSQIVDE RMLVYINDLL SSGE IPDLF PQEDRDEIVN ALRSETKSLG LLDTAENCWA TFIQKVKTNL HMVFTASPVG ENFRVRSQRF LATVTSTVID WFQPW PESS LFSVAKRFLD EVDLGEDAVR NAVVEFMPYS FQLVNKVSIK FREQERRYNY TTPKTFLELI KLYKNVLAAK RKANQD NTE RLENGLHKLH KVQADVDILV EEAKVKAVEV EHKVASANIF AEQVGVEKEK VNAENAAAQV EAEKCAVIAK EVSEKQA SC EKDLAAAEPL VAEAMAALET VTKKDLGEAK SLKKPPPGVD DITAVVIILL ENNPKDKSWQ AAQKLMNNVD KFLERVKS F KSVIDAGQVA RKTVDACRPY LALEWFNREA IGKKSAAAAG LCEWAVNIIK YYDVVQEVEP KRQELAAANA KLEEANVTL AAVEEKVALL NAKVQELEQQ YKEANDDKEA AIRESERCQR KLELANRLIN ALASEGERWA LTVEQLRKSY EVLTGDMLLA AAFVSYAGP FTAKFRAQLI DDWILFLRER HMPMTEGITD PLKVLVDDAL VAGWIREGLP SDPTSVQNGT ILTNSERWSL M MDPQLQGI LWIKERESKN NLQVTRMGAS NMLQVMERAI EAGHSVLVEN MGETIDAVLN PIITRSTFKK GRSLYVKLGD KE CEYNKNF RLFLHTKLSN PHYPPEIQAE TTLINFTVTE AGLEDQLLAL VVNKERPDLE ETKTQLIIQN TEFTIKLKEL EDG LLLKLS TAEGDITEDV ALIESLEDAK RVSTEISEKV KESRETEAAI NENRNKYRTV AARGAMLFFL LNSLNKIHAF YQFS LNAFV TVFSRGLDLA PGGRKKGKGL KKTPSLRDQP MDHQSLMEKA RRSSGVGDRR PSQEGLPGPE ASQASLAESQ GGRGS QVGD AEDEDDESFA MAPEALEQRL VNLLETCTFT VYNYTRRGLF DRDKLIVLSL LTFTILLRSQ AVDASEYEAL CRGMRN PTP PPITDDLSRW MAESQWAALD VLTTLPCFAH LAKDMEKNSD DWFNWCNNEA AERAPMPGEW GKLTEFRQLL IIRALRP DR ITNALQNFCE HMMGSDYVNQ DAFSPAAMMD ESSSATPIFF ILFPGYSPSK EIEVYANKCG YSVANGRLCL ISMGQGQE A PAEAVLDKYT REGGWVFLDN VHLMQGWIPK LERKLEIAAE SAHPDFRCFF SAEPINGAPH ANIIPESILQ TCIKISNEP PSDMKSNMRR AFAAFTPEQC DRPSTPAKRV AFRAILFGLC FYHSLLLGRK KFGVGIGTGS GSGLGFCRGY SFNIGDLTTC GDVLYNYLE AYEQIPWRDL QYMFGEVFYG GHITDSMDRR CCTTYLEVLI RNEILPKGNP DEVEAWEAPT LELAPGFFAP K PVDYPTLK EYIETSLPAE SPVVYGMHPN AELSLLTSLG ETLFKTVVEV AGGGGGGGGG GGGGENAVRQ ALETFKERLP EP FNMVEVE LRVKEKTPFV VVALQEATRM NALLSEMKRS MEELQLGLDG ALNMSDNMEK LAKGIASNTV PELWMSCMST RVQ EVYTLT AWYQDVVKRH DQLSAWTAGD IITPHSVWLP GLFNPKAFLT AVMQTFARAN KLPLDVMKFM TEVTRMTSPE QVTE AAPLG VYVHGLVLEG ARWDREDGCL RDSKPNELHP AMPVLQVKPV TADQFNLEGY YECPVYTNMQ RANVYSPVVS TFTLR TQDM PAKWVLASVA LLLQDDLAG

UniProtKB: PLD phosphodiesterase domain-containing protein

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分子 #4: Flagellar outer dynein arm heavy chain beta

分子名称: Flagellar outer dynein arm heavy chain beta / タイプ: protein_or_peptide / ID: 4 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chlamydomonas reinhardtii (クラミドモナス)
分子量理論値: 520.510906 KDa
配列文字列: MAEDEGMTAA APSSSVKDIR FDYIRDRVCS CLKVPDSAYD KLVSGDGRTS LVQFMEEAHT KRLLIMLDGK DLSATVKPPP KFKKKTVYF LKLQETKLDN DNIKKLVIHG EISENPLETL AAISQDVFMP VLTAPANQQG WPDVVAKEVT ENLHKFVSNV F VTIGQMKG ...文字列:
MAEDEGMTAA APSSSVKDIR FDYIRDRVCS CLKVPDSAYD KLVSGDGRTS LVQFMEEAHT KRLLIMLDGK DLSATVKPPP KFKKKTVYF LKLQETKLDN DNIKKLVIHG EISENPLETL AAISQDVFMP VLTAPANQQG WPDVVAKEVT ENLHKFVSNV F VTIGQMKG QTLLPLPPQN TVPTLQPEQS MHSLKDQDKI HILESAIVTW TKQIKNVLKA DPDAPLKEPG AYPGPLTELN FW SERAANL NSIHEQLTSE KTQKVVKVLE LAKSTYYPAF QRLFREVEAA QQEANDNVKF LKPLRKYLDK LNMMDDFPML VDL FKPIMH TLMLIWKHSK SYNSSTRFVT LMQEICNDLI MQACKYVPGS DLIQMEPSEA VDKLRMTLRV LGTFKNYYFE YRAL SMQDT PENPWKFQNN SLFARLDSFL ERCHDMMDLM STCMQFNRLE RVEIGGTKGK VLTNGVKAIH QDFTSAVEKF QQVTY DVMD VDAKQFDEDF FGFRVVIKEL ERRLAAIIIQ AFDDCTTIGT TFKLLDSFEG LLDREVIAHD LEKKHTDLLH SYARDL KDV ADLFHQYKDR PIVAKNSAPY SGAAYWVRGL MERIKDPMDR LLTMNKMVLE SELFREIQRT YDHLWEEMTE YRTRAVD AW CAQVAATSDE KLNLPLLSLI EETADGIRVL GVNFDPALVR LLRETKYFLL LETSTQDKNA DRNAEKAAEG GEVEVVKK A PKLSVPDSAK DLFASADTFR QQISALDLIC SIYNKVQRTI LAVEKPLVQQ KLDAVEQALN RGLAELNWKC AEIDTYIKE CMELVKDVDL VLNTIKDNVK ATQGILAMWE KNLMFERKDG KTYTFDELND AFNQLIQQRH SEIRDAGKEI TKLLSSSNRV LKVSKGAAS WRAYVDYFSN IVIDGFSAAI ISTVRYLLSQ IDPDILAKTE SSPLLEIQVE LVAPDIVWKP DLGEGGAKPG L RDMIKKWL QSFLEIGQLM KRLDVGEGNY AKELEEDFEV YDALNQVMMV TLANESRCED FKNQFAKFDY LWKQDLQATL QQ FITDNGV TLPDGTRDDP PLAKFEEQIV KYKNVASEIA SFKDTMTMGY VKVNAKPLRQ ALSTWASKWV YLFTHYLQEK VVN SITELY TFMDTSNSTL DLKVMGEGVE EEPEYHPDQD PEEAAAKKAA EEEEKRKALY AIMACMRDIR RRTERGTDTM FEPL KETVT ALHTFGIQLS DTVLHQLDNA EFNWRTLKKK MLNRREQLAP LQQAEAVEIR RKSDAFNERV EDFRTFFQRK APFAV SGGE LKLEQVKPAY KLLDEFRSGS LEGYPSVLGI IAESKQLQEA QDLFELYQPG YLQLQRCSEE LGHLKSLWDT VGTVMF TFR DWYKTPWDKI DVDFLVEETK KLSKDIKMLN KAVRNYDVYR MLEEAIKAVL TSLPLVQDLH HPAMRERHWK LLMQTTG KH FVMDDKFCLG DLLALELHNY VDACSEIVDR AQKELNIEKQ LKKIEDTWAG LSLAFSTYQD SDVMALLVDD AVNEALEA D NLQLQNLSGQ KYVQSNPMFL ETVSKWQNNM GRVSAVLETW QNVQKKWQNL ESIFIGSADI RVQLPEDSKR FDAVNADFQ ELMRTAPDIT NVVEACTLDG RQERLENMQS MLEQCEKALQ EYLETKRVAF PRFYFVSPAD LLDILSKGSN PQLILRHLQK CFDNIDNLS FRKDERGDPT KIATHMHSKE GEVVEFVEDC SCDGPVEVWL QNVVDSMKLA LQVEFRKAIP TYDELPRTKW I YVYSAQNT VVVSRTFFTQ EINEAFDDLE EGNEEALKVE LDRQVQQLAD LIDEINKEQT SLDRKKLITL CTIDVHSRDL VQ KLIDERV EDQMCFQWQS QLRYIQSEKT KTCQVNICDA EIAYSYEYIG NCGCLCITPL TDRCFITLTQ AQRLVLGGAP AGP AGTGKT ETTKDLARAL GIQCYVFNCS DQMDYKAMGH TYKGLAQTGA WGCFDEFNRI PVAVLSVCST QYKTVLDAIR AKKE RFTFE DADISLKSTV MAFITMNPGY PGRAELPESL KALFRPVSMV VPDLALICEI MLMAEGFQMS KILSRKFVIL YKLCE DLLS KSRHYDWKLR AIKTTLYVAG GMKRAAPELS EDKVLLRALR DFNLGKLTAD DTSIFMGLLN DLFPKTLELV PRALDK AFD EAAHKAATEL GYQPDDQFLL KISQLRELFV VRWSVFLLGA AGCGKTAVWR TLLRAQNSSG EKTIYQAVNP KAVTRNE LY GYLHPATREW KEGLMSVTFR NMANNKTNKH QWIVLDGDID AEWIESMNTV MDDNKMLTLA SNERIPLTPS MRLLLEIN H MVHCSPATVS RGGVIFINAD DVGWQPVVAS WIDKLEAAEY RPLLTALFTK YVDPCLEHCR RNFKTVVPLP AVNQAMTIC KILEGILPKE TVRGAPPPDK KLLHYHFVFA CVWAFGGCML VDKVTDYRTQ FSKWWVSEWK DVQFPEKGLV YDYYVDEQNC IMVPWEDRV TKFQYIPGDF TSLFVPTVET TRLTYFLDSL VSNKHYAMFV GNTGTGKSAI MVNKLRNMDT ETMSFYTINM N SLSEAPAL QVILEQPLEK KSGVRYGPPG SRRMVYFVDD MNMPLVDKYD TQSSIELLRQ MVDYHGWYDK VKIQLKEIIN CQ MAACMNP TAGSFNITPR MQRHFVTFAV QMPNAEITRA MYYQIIDGHF SSFDVDVAKM SNKLVDATCE LHRNVMHNFL PSA VKFHYQ FNLRDLSNIT QGLTRAIKEY YREPVKVARL WVHECERVFR DRMINEADMA KFDEFRVAVT KKFFDDCGGM VAIE ERPLI YASHASMTYT PEDVPVYNAL SSYDVLRKTL EDKLREYNES NAVMDLVLFQ QAMEHVTRIA RIIDLPRGNA MLVGV GGSG KQSLARLASY ICGYEVYQIS VSSTYGINDF KENLLGLYRK AGTKGTPITF LMTDNQIVKE GFLVYINDLL STGYIA DLF TPEDKEAFTN AVRNEVKAAG ILDSAENCWD FFIDKVRKFL HIVLCFSPVG DKFRIRARQF PALVNCTMFD WFHGWPG EA LVSVAQRFLV DVPNMEEVVR ENIAYHMAYA HQCVSEASER FKEAFRRYNY TTPKSYLELI SLYKMLLQLK RDDLRRSK E RLENGIDKIA QAAAQVTDLQ RVLKEEQIVV DEKKAQTDEL IVSIGKEKAI VDQAVEAGRE DEEAATALQT EVSAFQAEC ERDLLEAEPI IAQAEAALNS LNKKELSELK SFGSPAAEIV QVAAACLVLT CGGKIPKDRD WNAGKKMMAD VNSFLSSLMN FDKDNVPVV CVEVVEKDYI SNPGFTPDNI KGKSAACAGL CSWVINICKY FRIYQVVAPK RAALAEANKK LDTANKKLKV I RDEVKRLQ DRVALLEQSL MKATEDKNAA IAQADRTARK AQMAERLING LSGENTRWGA EIKRLESLEG RLVGDVLIAS AF VSYAGPF NMQFRKSLVD EKWLPDIIER QIPMTQGIRP LDLLTDDATK AKWANEGLPT DPLSVENGAI MSNASRWALM IDP QLQGIK WIINKETNNG LVIIQQSQPK YIDQVINCIE NGWPLLIENL PVDIDAVLDP VIGKMTIKKG RNIIMKIGDA EVQY DSRFR LYLQTKLSNP HFKPEVAAQT TLVNFCVTEK GLEDQLLALV VDHERPDLQE QAAGLVRSLN EYNITLVELE NNLLF NLAN ATGNILENIE LIEGLEETKR TAVEIEEKVK LAKQTEIQIA KAREVYRPVA TRGSLTYFLI DNLNALDRVY HYSMAN FVF VLKKGMDMTP GGKDESKVPL AERLNQEVDL DKRVELLVET TCFVLIGYVA QGLFERHKLI VATQLCMQIL RSRGELH YA KFEYLLRGPK VMGADNPLHD WVSDSVWGSV QALKELDDYQ GLPEDLIGSS KRWREWMELE RPEDEPLPGD WKRMQEFD K LLLFRALRPD RLTSAMGRFV TNMLGAKYVT SQPYDLERSY QDASPGTPIF VFLSPGVDVA GSVEALGKKL GFTLDNGKY ASVSLGQGQE PIAMDRLSAA HKNGGWVLLQ NIHLTIDWTT NQLDKKVDKL VEGAHPDFRL FLSAEPPPSL ERGLPISLLQ NSIKLTNEP PEGLKANLRR AWNNFNEEIL ESCAKQAEFR AIVFALCYFH AALLERKKFG VGNLPGARSG IGWNMNYPFN T GDLLCCGQ TANNYLENNV KVPWEDLRYN FGEIMYGGHI VEDYDRRLAM CYLRKYVNEG LLDNMEFFPG FAMPPNTANH RQ VLEFIDE VMPPETPLAF GLHPNAEIGF KLREAESFCN SLVQLQPRES SGEGGMSAEE RAKLVLDEVV DKLPDIFDME DVR SKINPD DPNMPFVMVA IQESERMNML LAEMKRSLLE LDLGLKGDLT MTEPMERLLK ALATDAVPGS WRNLAYPSLR PLGS WLGNL LARHAQLVDW TAELSTPKAV WLSGLFNPQS FLTAVMQATA RRNDWPLDKT VIITEVTKKQ PDQIEANSRD GAFIH GLTL EGARWDDKIG ALDDSKPKEL FCPMPVILVR AVTQDKAEMK DVYKCPVYTT EARFREEVFE AQLKSKHTEI KWVLAG VCL FLDVV

UniProtKB: Uncharacterized protein

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分子 #5: Dynein gamma chain, flagellar outer arm

分子名称: Dynein gamma chain, flagellar outer arm / タイプ: protein_or_peptide / ID: 5 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chlamydomonas reinhardtii (クラミドモナス)
分子量理論値: 513.491406 KDa
配列文字列: MALDNRHRLI VGKLAEAFGL PENVIEKTLT QDKQAVNSFF TPAGPPSLVF VYQVKEDKLK DGSVGPVDNK PTLHRIGPHE RIHNSVYFT RLNPKGINEK TLEADMGSGE LSVLWALENF KAIVSDLYLP IMQEQQQWGK MSTEYLEDFL SSTAKFGSML T EAVATVSG ...文字列:
MALDNRHRLI VGKLAEAFGL PENVIEKTLT QDKQAVNSFF TPAGPPSLVF VYQVKEDKLK DGSVGPVDNK PTLHRIGPHE RIHNSVYFT RLNPKGINEK TLEADMGSGE LSVLWALENF KAIVSDLYLP IMQEQQQWGK MSTEYLEDFL SSTAKFGSML T EAVATVSG GVEPMPDPRY IDQYGDLRPA GITQAAGDDD TLQEMEECLT EWCREAELLL NQTNKIKDGE ERGPDTELEY WR TRMSNFN SITEHLKTKE CKLVLGICSH AKTKAYLRWR GLDVQITDAA NESKDNVKYL ATLEKSMEPM YQGRVTDITE SLP ALMTNV RMMYTIARFY STAEHMTRLF TKITNQLVRR CKEQIMENGK IWDQDKVTLI GNMKVSVELA NVYRQQYRLA KETL AAQPK SKQFDFDEQA IFLKFDLSSK ALHKLIDMFT TIHQFSSLEQ HTHIEGLDTM LKSLNNIIDD VKRKPYDLLD YSRNA FDTD FLEFNVQIND LELQLQGFVN ASFEHITSTE HALSLLAQFQ AIMQRETLQQ DLENKYMVIF QNYAKDLDAV QKLYEK NKY EPPVPRNAPP VAGNIMWARQ LLRRIEAPMQ LAQNKNLLAA KESKKNIKTY NKVAKALIEF ETLWHQAWIK SIEQCKA GL AAPLLVQHPD TGKILVNFDK EIMQLVREAK YMQRFNIRCS SPSQMVLLQE EKFKFYHNQL THLVREYEHV LGRGATIK P LLRPHLDDME RKIAPGFAVL TWTSLNIDGY LHRFKQGLAR LEELVRKVVD LTENRVDSNL GAISSTLLVE LPTDRSFTY EGFVEQNRFQ KKQAELLAIR NEEVRRAIED LYTLVRNYPR ENTEDVLDEK EVSLLVRHYS KNMYNAIMQC TLNSLQAMKR RLGSKTTTG IFFMERPFFD VDVELKVPSV CMNPTLEEIQ AAINQCAKKV LTISKQLPAW GMDNVATYHE MMRGDRRWVK A VLRLTGSV EGIKTQVGEY IRTFDKYDFL WKEDLQAAYD HFMRSNPTLE AFEAELKKYM AIETEVTMIN GVNNIGALSL ET HPLKNSL KAEAVSWKTQ FAQNLHKQCS DDLKLDNYIR DTNSKFHRKI EDLEDVRNVM AVLKEVREKE SEIDNLIGPI EEM YGLLMR YEVRVPKEET TMVSDLRYGW KKLKKVATEV SDNLTRLQVG FKRELIKEVK TFVVDAQMFR KDWEANAMVP GLDP QEAVD RLRKFQQMFE VRKRKWENYS SGEELFGLPV TQYPELEQTE KEIQMLDRLY SLYVAVITTI KGYGDYFWVD VVEKI DEMG EQVQQYQNQS KKLPKLRDWP AYNACRKTID DFLEMLPLFQ ALTHKSMRER HWKEVMRVTG HELNLAEDHF KLQHLL DCN VLRYREDIED LTGAAVKEEI IEVKLNQLKA DWATANLALA EYKNRGPVIL KPSDTSELME KLEESQMTLG SMATNRY SA PFRDEVQAWS IKLSTVSEII EQWLMVQSMW QYMEAVFSGG DIVKQLPQEA KRFLNIDKNF MKIVSNALET QNVINTCF G NELMKNMLPH LHEQLEMCQK SLSAYLEQKR AEFPRFTCVG PHLLEICRWA HDPPSVVPHF QSGLFDSLSN VTFDRIDKT RMTEMFSQQN EKVEFERPVD AKGNIEVWLQ RLVDGMEDTV KQIIKRAVRN VAEMPLEDFV FGHPAQVSLL GIQFQWTAET QMALSSAKV DKTIMNKNMK KVDALLRDMV NITVRLDLTK NQRTNLETCI TVHMHQKEST EDLVKKKIKD PTDFEWLKQV R FYWRDDKD TVIISICDVD FEYSFEYLGV KERLVITPLT DICYITLSQA LGMFLGGAPA GPAGTGKTET TKDLGNTLGK YV VVFNCSD QFDYTYMGKI YKGLAQSGLW GCFDEFNRIN LDVLSVCAQQ VYCICRTRER KKSFQFTDGT TVSLDPRVGF FIT MNPGYA GAQELPENLK ALFRGVTMMV PNRQIIMKVK LAAAGYQEND ILSKKFFVLY GLCEQQLSKQ AHYDFGLRNI LSVL RTAGA SKRQSPDKSE VFLMMRTVRD MNMSKFVAED VPLFLSLIDD LFPGLKADAT RPDVNKDAEK VVLERGLQVH PTWMN KCIQ LYETYLVRHG IMLVGPSGSG KSAICECLAA ALTELGTKHV IWRMNPKAIT APQMFGRRDD TTGDWTDGIF AVLWRR AAK NKNQNTWIVL DGPVDAIWIE NLNTVLDDNK VLTLANGDRI LMSAAMKAMF EPENLNNASP ATVSRAGIIY VSDVELG WE PPVKSWLQKR DPTEACWARL FSKYIDRMLE FVRISLKPVM YNEQVSIVGT VMTLLNGYLK SMKEAGTAMN DAKYERVF L YCMTWSLGGL LEMKERPLFD QELRTFAHNM PPKEEDSDTI FEFLVNTTDA EWLHWRHCVP VWTYPKNEEK PQYAQLVIP TLDSVRYGAL LNLSYNVDKA TLLVGGPGTA KTNTINQFIS KFNAETTANK TITFSSLTTP GIFQMSIEGA VEKRQGRTFG PPGGKQMCI FVDDISMPYI NEWGHQVTNE IVRQLLEQGG MYSLEKPIGD MKFITDVRYV AAMNTPGGGK NDIPNRLKRQ F AIFNVPLP SVAAINGIFG KLVEGRFSRD VFCEEVVYVA SKLVPLTITL WNRIQTKMLP TPAKFHYLFN MRELSKVFQG VI LATRDRF NLAAGDSAVF GGNVASPEGY LLGLWIHECR RVFSDKLISY EDKNWVDKAV FDLCRDNFSS DLVKQVEEPI YFV DFLREP AVMMRPVEIV TPHPSFYYSV PGGLPEVRAR VEGLQRKFNE ESKVMKLELV LFTDCVTHLM RITRLLAWPG LGLL VGVGG SGKQSLSRLS AYIAGPTFYI TKTYNVSNLF EHIKGLYKIA GFKGQPVYFI FTDAEVKDEG FLEYINQILM TGEVA GLLT KEDQDMIVND IRPVMKHQAP GILDTYDNLY NFFLNRVRDN LHVVLCFSPV GAKFARRAQQ FPGLINGCTI DWFCPG PKK RLTSVSGKFI DKFTMACPKE VKNQLELLMG HAHVFVTAAC KEYFEKYRRY VYVTPKSYLS FLQGYKELYA KKWSFTK EL AYQIEVACQK MFEPKADVNK MKAELAVKNQ TAVSAKEAEA LLKQISESTA IAEKEKQKVA VIVDAVTKKA SEIATVKD D AERDLAAAKP ALDAALEALN SIKDGDIKNL KALKKPPQII TRIFDCVLVL RMLPVTKAEY TDEKGRMVQV GNYPEAQKM MNQMSFLQDL KDFAKEQIND ETVELLEPYF MSEDFTFENA QKGSGNVAGL CNWAESMAKY HNVAKVVEPK IAKLREAEAE LKLATKEKN AAEERMAKVQ AKLDEMQAQF DAAMAHKQAL EDDAAATQRK MDSANALIGA LAGEEARWTA QSKEFDVQIQ R LTGDCALA SAFVSYLGPF NKEFRELLLN RDFYGDCMKL NVPVTPHLQI TKFLVDDSEV GEWNLQGLPT DELSIQNGIM VT RASRYPV LVDPQGQGRE WIKNREEANQ LKTTQLNDKL FRNHLEECLA FGRPLLIENI EEELDPLLDP VLERRLVKKG KTW VVPLAD KEVDFTETFR LFCTTRLPNP HFTPELSAKV TVVDFTVTMA GLEDQLLGKL ISKEKKELED QRQQLLEEVQ SYKK RIKQL EDDLLCRLSN SQGNLLDEHQ ELIDVLAVTK QTAQDVSEKL ANASETNKRI NEACEEYRPV AHRATLLYFL IAEFS VVNC MYQTSLAQFN QLYELAIDRS EKANMPSKRI HNIIEYMTYE IYLYVQRGLF ERHKIIFALM LTNKVLTSAG KVKATD LDV FLKGGAALDI NSVRKKPKDW IPDLVWLNII ALSAMDAFRD IPDSVFRNDG LWRQWYDQEA PEMAKVPDYE DRLNKFE RM CVVKTFREDR TLIAAADYIA EALGQRFVES VPLNMEKRPG RRAMAKCPLI CLLSPGPDPT KLIEDLAKKK KIKTLGVS M GQGQEVIARK HMAAASLEGH WVLLQNTHLG LGYLTEVETF LVKEENVHED FRLWITAEPH PQFPIGLLQM GIKITNEAP VGIKAGLRAS YQWVNQDMLD MVSRQEWRQL LFVMCFLHSV VQEPQFGPIG WNVPYEFNQS DLSACVQFLQ NHLSEMDAKK APQPTWETV RYMISAIQYG SRITDDFDKL LMDTFAEKYF LQPVLQPSYE LFKDTRSSDG FSYRVPDSTD IETFGSYIET L PGTESPEI FGLHPNADIT FRTLQVQESI VTILDTMPKG AGSGSGLSRE DVVDKICEDL LSKAPPLFDK EETKEKLKKL PG GPTLPLT VHLRQEIDRL NIVTRLTTTT LKNLALAIAG TIAAERGLID ALDALFNARI PQQWLSKSWE ASTLGNWFTG LLQ RYDQLN KWLNLGRPKA YWMTGFFNPQ GFLTAMKQEV NRKHRDKWAL DDVVMSSEVT HRPKDFESLK EGAPEGVYVY GLYL DLRLD GRENRLMDSD PKKLFNPLPV LHVDGVLAKD KKRSGLYEAP KPYRVKARKG LNFITTFSVR TEDDKSKWIL PGVGI LCSI D

UniProtKB: Dynein gamma chain, flagellar outer arm

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分子 #6: Dynein, 78 kDa intermediate chain, flagellar outer arm

分子名称: Dynein, 78 kDa intermediate chain, flagellar outer arm
タイプ: protein_or_peptide / ID: 6 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chlamydomonas reinhardtii (クラミドモナス)
分子量理論値: 76.62868 KDa
配列文字列: MPALSPAKKG TDKGKTGKKT GKQEQNAQDY IPPPPPMPGD EAFAMPIREI VKPDNQLWLS EADLNEEVAK MLTANNPAAP KNIVRFNMK DKVFKLEPMV EQTVVHYATD GWLLHKSSDE AKRQMDMEKM EQEASARFQA DIDRASHEHK DHGDVEPPDD S RQLRNQFN ...文字列:
MPALSPAKKG TDKGKTGKKT GKQEQNAQDY IPPPPPMPGD EAFAMPIREI VKPDNQLWLS EADLNEEVAK MLTANNPAAP KNIVRFNMK DKVFKLEPMV EQTVVHYATD GWLLHKSSDE AKRQMDMEKM EQEASARFQA DIDRASHEHK DHGDVEPPDD S RQLRNQFN FSERAAQTLN YPLRDRETFT EPPPTATVSG ACTQWEIYDE YIKDLERQRI DEAMKSKGGK KAAAAARAAG AA HRQRNEH VPTLQSPTLM HSLGTLDRMV NQNMYEEVAM DFKYWDDASD AFRPGEGSLL PLWRFVSDKS KRRQVTSVCW NPL YDDMFA VGYGSYEFLK QASGLINIYS LKNPSHPEYT FHTESGVMCV HFHPEFANLL AVGCYDGSVL VYDVRLKKDE PIYQ ASVRT GKLNDPVWQI YWQPDDAQKS LQFVSISSDG AVNLWTLTKS ELIPECLMKL RVVRAGETRE EEDPNASGAA GGCCM DFCK MPGQESIYLV GTEEGAIHRC SKAYSSQYLS TYVSHHLAVY AVHWNNIHPS MFLSASCRLD HQAVGLCHDP KRAVMN FDL NDSIGDVSWA ALQPTVFAAV TDDGRVHVFD LAQNKLLPLC SQKVVKKAKL TKLVFNPKHP IVLVGDDKGC VTSLKLS PN LRITSKPEKG QKFEDLEVAK LDGVVEIARK SDADLAKNAA H

UniProtKB: Dynein, 78 kDa intermediate chain, flagellar outer arm

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分子 #7: Dynein, 70 kDa intermediate chain, flagellar outer arm

分子名称: Dynein, 70 kDa intermediate chain, flagellar outer arm
タイプ: protein_or_peptide / ID: 7 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chlamydomonas reinhardtii (クラミドモナス)
分子量理論値: 63.594062 KDa
配列文字列: MEIYHQYIKL RKQFGRFPKF GDEGSEMLAD IRPNEDHGKE YIPRNPVTTV TQCVPEMSEH EANTNAVILV NKAMSHVEGG WPKDVDYTE AEHTIRYRKK VEKDEDYIRT VVQLGSSVED LIKQNNAVDI YQEYFTNVTM DHTSEAPHVK TVTVFKDPNN I KRSASYVN ...文字列:
MEIYHQYIKL RKQFGRFPKF GDEGSEMLAD IRPNEDHGKE YIPRNPVTTV TQCVPEMSEH EANTNAVILV NKAMSHVEGG WPKDVDYTE AEHTIRYRKK VEKDEDYIRT VVQLGSSVED LIKQNNAVDI YQEYFTNVTM DHTSEAPHVK TVTVFKDPNN I KRSASYVN WHPDGSVPKV VVAYSILQFQ QQPAGMPLSS YIWDVNNPNT PEYEMVPTSQ ICCAKFNLKD NNLVGAGQYN GQ LAYFDVR KGNGPVEATP IDISHRDPIY DFAWLQSKTG TECMTVSTDG NVLWWDLRKM NECVENMPLK EKNSETTVGG VCL EYDTNA GPTNFMVGTE QGQIFSCNRK AKNPVDRVKY VLSGHHGPIY GLRRNPFNSK YFLSIGDWTA RVWVEDTAVK TPIL TTKYH PTYLTGGTWS PSRPGVFFTI KMDGAMDVWD LYYKHNEPTL TVQVSDLALT AFAVQESGGT VAVGTSDGCT SVLQL STGL SEASPAEKAN INAMFERETT REKNLEKAIK EAKVKARKEQ GRRDEVKDNV TEEQLKALED EFFKTTDPAV GGGYGA GEG AAAE

UniProtKB: Dynein, 70 kDa intermediate chain, flagellar outer arm

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分子 #8: Flagellar outer dynein arm light chain 2

分子名称: Flagellar outer dynein arm light chain 2 / タイプ: protein_or_peptide / ID: 8 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chlamydomonas reinhardtii (クラミドモナス)
分子量理論値: 15.903028 KDa
配列文字列:
MDDMPFQSGG IKEVVYENTF ITDPEGYGPN TKFERHKVQA VLKQVLKERI EKQKYDPVKG AQISKQLADD LREKVKALGY DRYKLVIQV TVGQKQGQAM RIISRCLWDQ TNDNFASEYY ENESMYCVCQ VYGLYYE

UniProtKB: Mr19,000 outer arm dynein light chain

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分子 #9: Dynein 18 kDa light chain, flagellar outer arm

分子名称: Dynein 18 kDa light chain, flagellar outer arm / タイプ: protein_or_peptide / ID: 9 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chlamydomonas reinhardtii (クラミドモナス)
分子量理論値: 17.807119 KDa
配列文字列:
MAAKVDIFAA NLPNLTDEEM DMCRKAFAMF DKDGSGTIDT KELRTALSAL GQNPTEEDMF VMISQVDQDG SRCIEFKEFV RVIQINKQM SAKDADEADT LDAFVALGGN LDKTGRILVD KLRSICEEFE LTVNVDRLVK DADRDLNGFL SYDEFRALLS

UniProtKB: Dynein 18 kDa light chain, flagellar outer arm

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分子 #10: Dynein 11 kDa light chain, flagellar outer arm

分子名称: Dynein 11 kDa light chain, flagellar outer arm / タイプ: protein_or_peptide / ID: 10 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chlamydomonas reinhardtii (クラミドモナス)
分子量理論値: 13.876627 KDa
配列文字列:
MADEKEQQGE QGYQLQSQHF YKIITSYMPE SFEQDAVQIA LIAVDKYRQL KDIAFYIKHE YDKKYPGSGK ATEGVYHCIV GKSFASAVS HETRQFIHMK VDTYHVILWK SKDTPFTPGG E

UniProtKB: Dynein 11 kDa light chain, flagellar outer arm

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分子 #11: Dynein light chain roadblock LC7a

分子名称: Dynein light chain roadblock LC7a / タイプ: protein_or_peptide / ID: 11 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chlamydomonas reinhardtii (クラミドモナス)
分子量理論値: 11.946708 KDa
配列文字列:
MVDIAAVDET FKRLQSHKGV LGIIVINAEG IAIRTTFDND LTVQYAALVS HFTVKARSAV RKLDGDNDLK FLRIRSKKHE IMIAPEFER SHEYYLVVVQ DPSREA

UniProtKB: Dynein light chain roadblock

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分子 #12: Dynein light chain roadblock LC7b

分子名称: Dynein light chain roadblock LC7b / タイプ: protein_or_peptide / ID: 12 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chlamydomonas reinhardtii (クラミドモナス)
分子量理論値: 11.132679 KDa
配列文字列:
MSDIESTLTR IQGHKGVIGV IIVNNQGVPL RSTFEHDAMT KQYADLVPGL ADLARNLVRD LDPQNDLEFL RIRSHKHEIM VAAKDDFVL LVIQDPNAAS T

UniProtKB: Dynein light chain roadblock

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分子 #13: Dynein 8 kDa light chain, flagellar outer arm

分子名称: Dynein 8 kDa light chain, flagellar outer arm / タイプ: protein_or_peptide / ID: 13 / コピー数: 4 / 光学異性体: LEVO
由来(天然)生物種: Chlamydomonas reinhardtii (クラミドモナス)
分子量理論値: 10.336775 KDa
配列文字列:
MASGSSKAVI KNADMSEEMQ ADAVDCATQA LEKYNIEKDI AAYIKKEFDR KHNPTWHCIV GRNFGSYVTH ETKHFIYFYL GQVAILLFK SG

UniProtKB: Dynein 8 kDa light chain, flagellar outer arm

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分子 #14: Dynein light chain 9

分子名称: Dynein light chain 9 / タイプ: protein_or_peptide / ID: 14 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chlamydomonas reinhardtii (クラミドモナス)
分子量理論値: 12.993606 KDa
配列文字列:
MEDDTAFDGL AEDDLMDDAE VDTMVRESIV AAIGDNQFAH NKIDSWSNNI VEGCLKRLAA MNKPFKYIVT TNLTQKAGAG LHAASCARW NEKTDGKLTV QWENNTMIVL VSVYWLAV

UniProtKB: Dynein light chain 9

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分子 #15: Dynein light chain 10

分子名称: Dynein light chain 10 / タイプ: protein_or_peptide / ID: 15 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chlamydomonas reinhardtii (クラミドモナス)
分子量理論値: 12.101117 KDa
配列文字列:
MAEQQFEDME AFLRVAKYTL VKFTDMHVEM KEEAMDICIT AVEKYPNDAE KCTQMIKDQM DKKFGAPWHV VVGKGFSYEI TYEVRNLLY IYVGGRTAVL LWKM

UniProtKB: Dynein light chain

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分子 #16: Outer dynein arm-docking complex subunit 1

分子名称: Outer dynein arm-docking complex subunit 1 / タイプ: protein_or_peptide / ID: 16 / コピー数: 2 / 光学異性体: LEVO
EC番号: 転移酵素; リンを含む基を移すもの; キナーゼ（アルコールにつなげるもの）
由来(天然)生物種: Chlamydomonas reinhardtii (クラミドモナス)
分子量理論値: 83.51818 KDa
配列文字列: MAQKSTLKLP RLRTKEELLK TSPELCKLLG EDSDDGRSMS PFTAPPPAGT VKPPSRGLPA VSTKATKGPG MDTPRGLGEE ELTEEELLR LELEKIKNER QVLLDSIKLV KAQAGTAGGE AQQNDIKALR RELELKKAKL NELHEDVRRK ENVLNKQRDD T TDASRLTP ...文字列:
MAQKSTLKLP RLRTKEELLK TSPELCKLLG EDSDDGRSMS PFTAPPPAGT VKPPSRGLPA VSTKATKGPG MDTPRGLGEE ELTEEELLR LELEKIKNER QVLLDSIKLV KAQAGTAGGE AQQNDIKALR RELELKKAKL NELHEDVRRK ENVLNKQRDD T TDASRLTP GELSEEQAYI QQLQDEMKQI DEELVEAEAK NRLYYLLGER TRREHLAMDM KVRASQQLKK DSADDLYTLT AH FNEMRAA KEQAERELAR MKRMLEETRV DWQKKLRERR REVRELKKRQ QKQLERERKM REKQLERERQ ERELQAKLKM EQD SYEMRV AALAPKVEAM EHSWNRIRTI SGADTPEEVL AYWEGLKAKE EQMRSLVSLA EQRESSAKSE IAALLENRSG MYEK GSAAA ADVGEGSEER ATLITEVERN MEGAKGKFNK LRSVCIGAEQ GLRSLQERLM IALEEIHPDQ LRASHMKGGH DAKAR GKGA ASAGARRGSA HAHTPDRNKR GPATGSRSQS PALVPHSPAG DKPSSPLHGT SPEHGHEPIP EGAEELAGEA EMVSPL GAD GNTIDDEHFF PELPELLTSV TDRLNRVLVL AAELDAQEPA GAGEDGLPLS GEPGADGAEG AAPASPSRGA PEGLSES ER TLVKGMNRRT WTGAPLLETI NASPSEAALT LNIKRKKGKK KEQQVQPDLN RILGYTGSDV EEEEPESEEE TEEEANKD D GVVDRDYIKL RALKMSQRLA NQQRAIKV

UniProtKB: Uncharacterized protein

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分子 #17: DC1

分子名称: DC1 / タイプ: protein_or_peptide / ID: 17 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chlamydomonas reinhardtii (クラミドモナス)
分子量理論値: 13.805006 KDa
配列文字列: (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK) ...文字列:
(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)

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分子 #18: Outer dynein arm protein 1

分子名称: Outer dynein arm protein 1 / タイプ: protein_or_peptide / ID: 18 / コピー数: 2 / 光学異性体: LEVO
由来(天然)生物種: Chlamydomonas reinhardtii (クラミドモナス)
分子量理論値: 62.292305 KDa
配列文字列: MPSADATRGG GSAGSMGKGT LGAGDTLGHK SVLDKQRAAI EKLRAQNEQL KTELLLENKF SVRPGDPFAQ ALINRLQDEG DMLARKIVL EMRKTKMLDQ QLSEMGSTLT TTRNNMGGIF SAKEQSTAVQ KRIKLLENRL EKAYVKYNQS ITHNKQLRES I NNLRRERI ...文字列:
MPSADATRGG GSAGSMGKGT LGAGDTLGHK SVLDKQRAAI EKLRAQNEQL KTELLLENKF SVRPGDPFAQ ALINRLQDEG DMLARKIVL EMRKTKMLDQ QLSEMGSTLT TTRNNMGGIF SAKEQSTAVQ KRIKLLENRL EKAYVKYNQS ITHNKQLRES I NNLRRERI MFESIQSNLE RELAKLKRDM ADMIQQANGA FEAREKAIGE MNALKAQADK EQQGFEEEWR QLTTIIEEDK KE RERARAQ ELAMRERETQ ELLKMGTLSS AEKKKRITKG SWNVGYNKAM AQNVAAEKVE MYGQAFKRIQ DATGIEDIDQ LVN TFLAAE DQNYTLFNYV NEVNQEIEKL EDQINIMRGE INKYRETGRE LDMTKSRELT EEEARLAASE AQSQLYEKRT DSAL SMTTA LKAGINDLFE RIGCNTPAVR DLLGEEGVTE ANLTAYLGII EQRTNEILQI YAKRKAQQGT DGLAEALLAQ PLTQP GNRI IIEPPSTTQE EEVEGLEPEP VEEDRPLTRE HLESKVQRTL PRKLETAIKV RPAGADATGG KRGSPTRR

UniProtKB: Outer dynein arm protein 1

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分子 #19: DC2

分子名称: DC2 / タイプ: protein_or_peptide / ID: 19 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chlamydomonas reinhardtii (クラミドモナス)
分子量理論値: 14.31563 KDa
配列文字列: (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK) ...文字列:
(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)

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分子 #20: Outer dynein arm-docking complex protein DC3

分子名称: Outer dynein arm-docking complex protein DC3 / タイプ: protein_or_peptide / ID: 20 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chlamydomonas reinhardtii (クラミドモナス)
分子量理論値: 21.371311 KDa
配列文字列:
MASAAARERY ARKNEQNELE RAFNTIDSKG DKKIDAEELT ELFLRLGHKP KRGEVEDMIW EVDEDCDGCI SLLEFQTLYT RCRDDKTGY EPRGLFNVVE FVMNDKNNQG FITLEEAMQI MYLRYGRAEL DMQLEQVFGT ADLNSGKILT LTEFLHCLHT N QVKQLLNR VTAKTYKAPP PPQKRK

UniProtKB: Outer dynein arm-docking complex protein DC3

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分子 #21: GUANOSINE-5'-TRIPHOSPHATE

分子名称: GUANOSINE-5'-TRIPHOSPHATE / タイプ: ligand / ID: 21 / コピー数: 7 / 式: GTP
分子量理論値: 523.18 Da
Chemical component information

ChemComp-GTP:
GUANOSINE-5'-TRIPHOSPHATE / GTP / GTP, エネルギー貯蔵分子*YM

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分子 #22: MAGNESIUM ION

分子名称: MAGNESIUM ION / タイプ: ligand / ID: 22 / コピー数: 7 / 式: MG
分子量理論値: 24.305 Da

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分子 #23: GUANOSINE-5'-DIPHOSPHATE

分子名称: GUANOSINE-5'-DIPHOSPHATE / タイプ: ligand / ID: 23 / コピー数: 8 / 式: GDP
分子量理論値: 443.201 Da
Chemical component information

ChemComp-GDP:
GUANOSINE-5'-DIPHOSPHATE / GDP / GDP, エネルギー貯蔵分子*YM

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実験情報

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構造解析

手法クライオ電子顕微鏡法
解析らせん対称体再構成法
試料の集合状態filament

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試料調製

濃度20 mg/mL
緩衝液pH: 7.4
構成要素:
濃度名称式
30.0 mMHEPES
25.0 mMKCl
5.0 mMMgSO4
0.5 mMEGTA
10.0 mMATP
0.75 mMCaCl2

詳細: Buffer also contained 1x Protease Arrest (G-Biosciences)
グリッド前処理 - タイプ: GLOW DISCHARGE / 前処理 - 時間: 30 sec. / 詳細: 15 mA
凍結凍結剤: ETHANE / チャンバー内湿度: 100 % / チャンバー内温度: 298 K / 装置: FEI VITROBOT MARK IV
詳細: 2.5 ul of splayed axoneme solution was then dispensed onto glow-discharged C-Flat 1.2/1.3-4Cu grids inside a Vitrobot Mark IV under 100% humidity. After a 10 s delay time, cryo-EM samples ...詳細: 2.5 ul of splayed axoneme solution was then dispensed onto glow-discharged C-Flat 1.2/1.3-4Cu grids inside a Vitrobot Mark IV under 100% humidity. After a 10 s delay time, cryo-EM samples were prepared by first blotting for 10 s with blot force set to 16 and immediately plunged into liquid ethane..
詳細Splayed axonemes isolated from Chlamydomonas reinhardtii flagella.

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電子顕微鏡法

顕微鏡TFS KRIOS
特殊光学系エネルギーフィルター - 名称: GIF Bioquantum / エネルギーフィルター - スリット幅: 25 eV
撮影フィルム・検出器のモデル: GATAN K3 BIOQUANTUM (6k x 4k)
撮影したグリッド数: 2 / 実像数: 20524 / 平均露光時間: 3.7 sec. / 平均電子線量: 61.48 e/Å2
電子線加速電圧: 300 kV / 電子線源: FIELD EMISSION GUN
電子光学系C2レンズ絞り径: 50.0 µm / 照射モード: FLOOD BEAM / 撮影モード: BRIGHT FIELD / Cs: 2.7 mm
試料ステージ試料ホルダーモデル: FEI TITAN KRIOS AUTOGRID HOLDER
ホルダー冷却材: NITROGEN
実験機器
モデル: Titan Krios / 画像提供: FEI Company

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画像解析

最終 再構成想定した対称性 - らせんパラメータ - Δz: 82.0 Å
想定した対称性 - らせんパラメータ - ΔΦ: 0 °
想定した対称性 - らせんパラメータ - 軸対称性: C1 (非対称)
解像度のタイプ: BY AUTHOR / 解像度: 7.5 Å / 解像度の算出法: FSC 0.143 CUT-OFF / ソフトウェア - 名称: RELION (ver. 3.1)
詳細: The composite map varies in resolution from 3.5 to 12 A. The reference map is 7.5 A.
使用した粒子像数: 485694
Segment selection選択した数: 5584147 / ソフトウェア - 名称: RELION (ver. 3.1)
初期モデルモデルのタイプ: PDB ENTRY
PDBモデル - PDB ID:

6u42

最終 角度割当タイプ: NOT APPLICABLE / ソフトウェア - 名称: RELION (ver. 3.1)

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原子モデル構築 1

精密化空間: REAL / プロトコル: OTHER / 当てはまり具合の基準: Correlation coefficient
得られたモデル

PDB-7kzm:
Outer dynein arm bound to doublet microtubules from C. reinhardtii

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万見について

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お知らせ

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2022年2月9日: EMDBエントリの付随情報ファイルのフォーマットが新しくなりました

EMDBエントリの付随情報ファイルのフォーマットが新しくなりました

  • EMDBのヘッダファイルのバージョン3が、公式のフォーマットとなりました。
  • これまでは公式だったバージョン1.9は、アーカイブから削除されます。

関連情報:EMDBヘッダ

外部リンク:wwPDBはEMDBデータモデルのバージョン3へ移行します

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2020年8月12日: 新型コロナ情報

新型コロナ情報

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

新ページ: EM Navigatorに新型コロナウイルスの特設ページを開設しました。

関連情報:Covid-19情報 / 2020年3月5日: 新型コロナウイルスの構造データ

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2020年3月5日: 新型コロナウイルスの構造データ

新型コロナウイルスの構造データ

関連情報:万見生物種 / 2020年8月12日: 新型コロナ情報

外部リンク:COVID-19特集ページ - PDBj / 今月の分子2020年2月：コロナウイルスプロテーアーゼ

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2019年1月31日: EMDBのIDの桁数の変更

EMDBのIDの桁数の変更

  • EMDBエントリに付与されているアクセスコード(EMDB-ID)は4桁の数字(例、EMD-1234)でしたが、間もなく枯渇します。これまでの4桁のID番号は4桁のまま変更されませんが、4桁の数字を使い切った後に発行されるIDは5桁以上の数字(例、EMD-12345)になります。5桁のIDは2019年の春頃から発行される見通しです。
  • EM Navigator/万見では、接頭語「EMD-」は省略されています。

関連情報:Q: 「EMD」とは何ですか？ / 万見/EM NavigatorにおけるID/アクセスコードの表記

外部リンク:EMDB Accession Codes are Changing Soon! / PDBjへお問い合わせ

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2017年7月12日: PDB大規模アップデート

PDB大規模アップデート

  • 新バージョンのPDBx/mmCIF辞書形式に基づくデータがリリースされました。
  • 今回の更新はバージョン番号が4から5になる大規模なもので、全エントリデータの書き換えが行われる「Remediation」というアップデートに該当します。
  • このバージョンアップで、電子顕微鏡の実験手法に関する多くの項目の書式が改定されました(例：em_softwareなど)。
  • EM NavigatorとYorodumiでも、この改定に基づいた表示内容になります。

外部リンク:wwPDB Remediation / OneDepデータ基準に準拠した、より強化された内容のモデル構造ファイルが、PDBアーカイブで公開されました。

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万見 (Yorodumi)

幾万の構造データを、幾万の視点から

  • 万見(Yorodumi)は、EMDB/PDB/SASBDBなどの構造データを閲覧するためのページです。
  • EM Navigatorの詳細ページの後継、Omokage検索のフロントエンドも兼ねています。

関連情報:EMDB / PDB / SASBDB / 3つのデータバンクの比較 / 万見検索 / 2016年8月31日: 新しいEM Navigatorと万見 / 万見文献 / Jmol/JSmol / 機能・相同性情報 / 新しいEM Navigatorと万見の変更点

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