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Open data
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Basic information
Entry | Database: EMDB / ID: EMD-11659 | |||||||||
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Title | The contracted tail of myophage vb_EcoM_CBA120 (CBA120) | |||||||||
![]() | Contracted tail of bacteriophage CBA120 | |||||||||
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Biological species | ![]() | |||||||||
Method | helical reconstruction / cryo EM / Resolution: 4.9 Å | |||||||||
![]() | Nazarov S / Leiman P | |||||||||
![]() | ![]() Title: Structure of myophage CBA120 from 'Viunalikevirus' genus Authors: Nazarov S / Taylor N / Leiman P | |||||||||
History |
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Structure visualization
Movie |
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Structure viewer | EM map: ![]() ![]() ![]() |
Supplemental images |
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Downloads & links
-EMDB archive
Map data | ![]() | 58.7 MB | ![]() | |
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Header (meta data) | ![]() ![]() | 11.1 KB 11.1 KB | Display Display | ![]() |
FSC (resolution estimation) | ![]() | 9.1 KB | Display | ![]() |
Images | ![]() | 403.7 KB | ||
Others | ![]() ![]() | 48 MB 48 MB | ||
Archive directory | ![]() ![]() | HTTPS FTP |
-Validation report
Summary document | ![]() | 510.8 KB | Display | ![]() |
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Full document | ![]() | 509.9 KB | Display | |
Data in XML | ![]() | 15.8 KB | Display | |
Data in CIF | ![]() | 21 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Similar structure data | |
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EM raw data | ![]() Data size: 674.2 Data #1: Compressed unaligned gain-corrected multi-frame micrographs of bacteriophage CBA120 in "contracted" state [micrographs - multiframe]) |
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Links
EMDB pages | ![]() ![]() |
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Map
File | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Annotation | Contracted tail of bacteriophage CBA120 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Voxel size | X=Y=Z: 2.34 Å | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Density |
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Symmetry | Space group: 1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Details | EMDB XML:
CCP4 map header:
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-Supplemental data
-Half map: #2
File | emd_11659_half_map_1.map | ||||||||||||
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Projections & Slices |
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Density Histograms |
-Half map: #1
File | emd_11659_half_map_2.map | ||||||||||||
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Projections & Slices |
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Density Histograms |
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Sample components
-Entire : Escherichia virus CBA120
Entire | Name: ![]() |
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Components |
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-Supramolecule #1: Escherichia virus CBA120
Supramolecule | Name: Escherichia virus CBA120 / type: virus / ID: 1 / Parent: 0 / NCBI-ID: 1987159 / Sci species name: Escherichia virus CBA120 / Virus type: VIRION / Virus isolate: STRAIN / Virus enveloped: No / Virus empty: No |
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-Experimental details
-Structure determination
Method | cryo EM |
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![]() | helical reconstruction |
Aggregation state | particle |
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Sample preparation
Buffer | pH: 7.5 / Component - Name: SM |
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Vitrification | Cryogen name: ETHANE |
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Electron microscopy
Microscope | FEI TECNAI F20 |
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Image recording | Film or detector model: DIRECT ELECTRON DE-16 (4k x 4k) / Average electron dose: 25.0 e/Å2 |
Electron beam | Acceleration voltage: 200 kV / Electron source: ![]() |
Electron optics | Illumination mode: FLOOD BEAM / Imaging mode: BRIGHT FIELD |
Experimental equipment | ![]() Model: Tecnai F20 / Image courtesy: FEI Company |