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- PDB-4bcl: FMO protein from Prosthecochloris aestuarii 2K at Room Temperature -
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Open data
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Basic information
Entry | Database: PDB / ID: 4bcl | |||||||||
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Title | FMO protein from Prosthecochloris aestuarii 2K at Room Temperature | |||||||||
![]() | BACTERIOCHLOROPHYLL A PROTEIN | |||||||||
![]() | ELECTRON TRANSPORT / EXCITATION ENERGY TRANSFER / REACTION CENTER | |||||||||
Function / homology | ![]() | |||||||||
Biological species | ![]() | |||||||||
Method | ![]() ![]() | |||||||||
![]() | Tronrud, D.E. / Matthews, B.W. | |||||||||
![]() | Journal: Photosynthetic Reaction Center / Year: 1993 Title: Refinement of the Structure of a Water-Soluble Antenna Complex from Green Photosynthetic Bacteria by Incorporation of the Chemically Determined Amino Acid Sequence Authors: Tronrud, D.E. / Matthews, B.W. #1: ![]() Title: Structure and X-Ray Amino Acid Sequence of a Bacteriochlorophyll a Protein from Prosthecochloris Aestuarii Refined at 1.9 A Resolution Authors: Tronrud, D.E. / Schmid, M.F. / Matthews, B.W. #2: ![]() Title: Structural Studies of a Bacteriochlorophyll-Containing Protein Authors: Schmid, M.F. / Tronrud, D.E. / Matthews, B.W. #3: ![]() Title: Lipid-Protein Interactions in a Bacteriochlorophyll-Containing Protein Authors: Matthews, B.W. #4: ![]() Title: Structure of a Green Bacteriochlorophyll Protein Authors: Matthews, B.W. / Fenna, R.E. #5: ![]() Title: Structure of a Bacteriochlorophyll A-Protein from the Green Photosynthetic Bacterium Prosthecochloris Aestuarii Authors: Matthews, B.W. / Fenna, R.E. / Bolognesi, M.C. / Schmid, M.F. / Olson, J.M. #6: ![]() Title: Bacteriochlorophyll A-Protein from Green Bacteria Authors: Olson, J.M. #7: ![]() Title: Atomic Coordinates for the Chlorophyll Core of a Bacteriochlorophyll A-Protein from Green Photosynthetic Bacteria Authors: Fenna, R.E. / Ten Eyck, L.F. / Matthews, B.W. #8: ![]() Title: An Evaluation of Electron Micrographs of Bacteriochlorophyll A-Protein Crystals in Terms of the Structure Determined by X-Ray Crystallography Authors: Matthews, B.W. / Fenna, R.E. / Remington, S.J. #9: ![]() Title: Structure of a Bacteriochlorophyll A-Protein from Prosthecochloris Aestuarii Authors: Fenna, R.E. / Matthews, B.W. #10: ![]() Title: Chlorophyll Arrangement in a Bacteriochlorophyll Protein from Chlorobium Limicola Authors: Fenna, R.E. / Matthews, B.W. | |||||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 97 KB | Display | ![]() |
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PDB format | ![]() | 75.7 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 2.2 MB | Display | ![]() |
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Full document | ![]() | 2.2 MB | Display | |
Data in XML | ![]() | 22.7 KB | Display | |
Data in CIF | ![]() | 30.2 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Related structure data | |
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Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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1 | ![]()
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Unit cell |
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Components on special symmetry positions |
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Components
#1: Protein | Mass: 40282.168 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) ![]() | ||
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#2: Chemical | ChemComp-BCL / #3: Water | ChemComp-HOH / | |
-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 3.2 Å3/Da / Density % sol: 70 % |
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Crystal grow | pH: 7.8 Details: PROTEIN CRYSTALLIZES FROM SOLUTION OF 14MG/ML OF PROTEIN IN 10MM TRIS.HCL BUFFER, PH 7.8, AND 1M NACL AND 5% (W/V) NH4 SO4 |
-Data collection
Diffraction | Mean temperature: 290 K |
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Diffraction source | Source: ![]() |
Detector | Type: KODAK FILM / Detector: FILM / Details: ADJUSTABLE COLLIMATOR |
Radiation | Monochromator: GRAPHITE(002) / Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Wavelength: 1.5418 Å / Relative weight: 1 |
Reflection | Resolution: 1.84→22.2 Å / Num. obs: 46456 / % possible obs: 73 % / Redundancy: 2.7 % / Biso Wilson estimate: 16.9 Å2 / Rmerge(I) obs: 0.116 / Rsym value: 0.046 |
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Processing
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Refinement | Method to determine structure: ![]()
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Solvent computation | Solvent model: BABINET SCALING / Bsol: 212.3 Å2 / ksol: 0.826 e/Å3 | ||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement step | Cycle: LAST / Resolution: 1.9→20 Å
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Refine LS restraints |
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