Database of articles cited by EMDB/PDB/SASBDB data

Keywords
Structure methods	All X-ray diffraction NMR electron microscopy small angle scattering neutron diffraction fiber diffraction powder diffraction infrared spectroscopy EPR fluorescence transfer theoretical model Hybrid
Author
Journal
IF	>30 >20 >10 >5 all

Title	Structure of the SARS-CoV-2 main protease
Journal, issue, pages	To Be Published
Publish date	May 10, 2024 (structure data deposition date)
Authors	Blankenship, L.R. / Liu, W.R.
External links	Search PubMed
Methods	X-ray diffraction
Resolution	1.6 - 2.5 Å
Structure data	PDB-9bql: Structure of the SARS-CoV-2 main protease in complex with inhibitor VB-A-32 Method: X-RAY DIFFRACTION / Resolution: 1.8 Å PDB-9bqm: Structure of the SARS-CoV-2 main protease in complex with inhibitor VB-A-26 Method: X-RAY DIFFRACTION / Resolution: 2.1 Å PDB-9bqo: Structure of the SARS-CoV-2 main protease in complex with inhibitor k88 Method: X-RAY DIFFRACTION / Resolution: 2.5 Å PDB-9bqp: Structure of the SARS-CoV-2 main protease in complex with inhibitor R79 Method: X-RAY DIFFRACTION / Resolution: 2 Å PDB-9bqq: Structure of the SARS-CoV-2 main protease in complex with inhibitor R81 Method: X-RAY DIFFRACTION / Resolution: 2 Å PDB-9bqt: Structure of the SARS-CoV-2 main protease in complex with inhibitor R80 Method: X-RAY DIFFRACTION / Resolution: 2.1 Å PDB-9bqy: Structure of the SARS-CoV-2 main protease in complex with inhibitor R70 Method: X-RAY DIFFRACTION / Resolution: 2.5 Å PDB-9bqz: Structure of the SARS-CoV-2 main protease in complex with inhibitor x11 Method: X-RAY DIFFRACTION / Resolution: 1.7 Å PDB-9br0: Structure of the SARS-CoV-2 main protease in complex with inhibitor YR-B-84 Method: X-RAY DIFFRACTION / Resolution: 2.5 Å PDB-9br1: Structure of the SARS-CoV-2 main protease in complex with inhibitor VB-A-70 Method: X-RAY DIFFRACTION / Resolution: 1.9 Å PDB-9bs7: Structure of the SARS-CoV-2 main protease in complex with inhibitor Vinylpyridine Method: X-RAY DIFFRACTION / Resolution: 1.85 Å PDB-9bs8: Structure of the SARS-CoV-2 main protease in complex with inhibitor YR-B-107 Method: X-RAY DIFFRACTION / Resolution: 1.7 Å PDB-9bsa: Structure of the SARS-CoV-2 main protease in complex with inhibitor VB-B-112 Method: X-RAY DIFFRACTION / Resolution: 1.7 Å PDB-9bse: Structure of the SARS-CoV-2 main protease in complex with inhibitor YR-B-165 Method: X-RAY DIFFRACTION / Resolution: 1.85 Å PDB-9bsf: Structure of the SARS-CoV-2 main protease in complex with inhibitor SR-A-171 Method: X-RAY DIFFRACTION / Resolution: 1.75 Å PDB-9bsg: Structure of the SARS-CoV-2 main protease in complex with inhibitor VB-C-20 Method: X-RAY DIFFRACTION / Resolution: 1.75 Å PDB-9bsi: Structure of the SARS-CoV-2 main protease in complex with inhibitor SR-B-7 Method: X-RAY DIFFRACTION / Resolution: 1.7 Å PDB-9bso: Structure of the SARS-CoV-2 main protease in complex with inhibitor SR-B-13 Method: X-RAY DIFFRACTION / Resolution: 1.7 Å PDB-9bsp: Structure of the SARS-CoV-2 main protease in complex with inhibitor VB-C-68 Method: X-RAY DIFFRACTION / Resolution: 1.6 Å PDB-9bsq: Structure of the SARS-CoV-2 main protease in complex with inhibitor VB-C-70 Method: X-RAY DIFFRACTION / Resolution: 1.8 Å PDB-9bsr: Structure of the SARS-CoV-2 main protease in complex with inhibitor YR-B-136B Method: X-RAY DIFFRACTION / Resolution: 1.9 Å PDB-9bst: Structure of the SARS-CoV-2 main protease in complex with inhibitor CID8009_5647 Method: X-RAY DIFFRACTION / Resolution: 1.6 Å PDB-9bte: Structure of the SARS-CoV-2 main protease in complex with inhibitor CID5573_0017 Method: X-RAY DIFFRACTION / Resolution: 1.6 Å PDB-9btf: Structure of the SARS-CoV-2 main protease in complex with inhibitor SR-B-77 Method: X-RAY DIFFRACTION / Resolution: 1.8 Å PDB-9btk: Structure of the SARS-CoV-2 main protease in complex with inhibitor YR-C-108T Method: X-RAY DIFFRACTION / Resolution: 1.79 Å PDB-9btr: Structure of the SARS-CoV-2 main protease in complex with inhibitor YR-C-163 Method: X-RAY DIFFRACTION / Resolution: 1.9 Å PDB-9btt: Structure of the SARS-CoV-2 main protease in complex with inhibitor SR-B-51T Method: X-RAY DIFFRACTION / Resolution: 1.8 Å
Chemicals	PDB-1arg: Aspartate aminotransferase, phospho-5'-pyridoxyl aspartate complex ChemComp-HOH: WATER PDB-1ari: Aspartate aminotransferase, W140H mutant, maleate complex PDB-1arm: CARBOXYPEPTIDASE A WITH ZN REPLACED BY HG PDB Unreleased entry PDB-1arn: Unknown entry PDB-1arh: ASPARTATE AMINOTRANSFERASE, Y225R/R386A MUTANT PDB-1ars: X-RAY CRYSTALLOGRAPHIC STUDY OF PYRIDOXAL 5'-PHOSPHATE-TYPE ASPARTATE AMINOTRANSFERASES FROM ESCHERICHIA COLI IN OPEN AND CLOSED FORM PDB-1art: X-RAY CRYSTALLOGRAPHIC STUDY OF PYRIDOXAL 5'-PHOSPHATE-TYPE ASPARTATE AMINOTRANSFERASES FROM ESCHERICHIA COLI IN OPEN AND CLOSED FORM PDB-1arv: CRYSTAL STRUCTURES OF CYANIDE-AND TRIIODIDE-BOUND FORMS OF ARTHROMYCES RAMOSUS PEROXIDASE AT DIFFERENT PH VALUES. PERTURBATIONS OF ACTIVE SITE RESIDUES AND THEIR IMPLICATION IN ENZYME CATALYSIS PDB-1aru: CRYSTAL STRUCTURES OF CYANIDE-AND TRIIODIDE-BOUND FORMS OF ARTHROMYCES RAMOSUS PEROXIDASE AT DIFFERENT PH VALUES. PERTURBATIONS OF ACTIVE SITE RESIDUES AND THEIR IMPLICATION IN ENZYME CATALYSIS PDB-1arr: RELAXATION MATRIX REFINEMENT OF THE SOLUTION STRUCTURE OF THE ARC REPRESSOR PDB Unreleased entry PDB-1ar3: Unknown entry PDB-1ar4: X-RAY STRUCTURE ANALYSIS OF THE CAMBIALISTIC SUPEROXIDE DISMUTASE FROM PROPIONIBACTERIUM SHERMANII ACTIVE WITH FE OR MN PDB-1ar5: X-RAY STRUCTURE OF THE CAMBIALISTIC SUPEROXIDE DISMUTASE FROM PROPIONIBACTERIUM SHERMANII ACTIVE WITH FE OR MN PDB-1ar6: P1/MAHONEY POLIOVIRUS, DOUBLE MUTANT V1160I +P1095S PDB-1ar7: P1/MAHONEY POLIOVIRUS, DOUBLE MUTANT P1095S + H2142Y PDB-1ar8: P1/MAHONEY POLIOVIRUS, MUTANT P1095S PDB-1ar9: P1/MAHONEY POLIOVIRUS, SINGLE SITE MUTANT H2142Y PDB-1arw: CRYSTAL STRUCTURES OF CYANIDE-AND TRIIODIDE-BOUND FORMS OF ARTHROMYCES RAMOSUS PEROXIDASE AT DIFFERENT PH VALUES. PERTURBATIONS OF ACTIVE SITE RESIDUES AND THEIR IMPLICATION IN ENZYME CATALYSIS PDB-1arx: CRYSTAL STRUCTURES OF CYANIDE-AND TRIIODIDE-BOUND FORMS OF ARTHROMYCES RAMOSUS PEROXIDASE AT DIFFERENT PH VALUES. PERTURBATIONS OF ACTIVE SITE RESIDUES AND THEIR IMPLICATION IN ENZYME CATALYSIS PDB-1ary: CRYSTAL STRUCTURES OF CYANIDE-AND TRIIODIDE-BOUND FORMS OF ARTHROMYCES RAMOSUS PEROXIDASE AT DIFFERENT PH VALUES. PERTURBATIONS OF ACTIVE SITE RESIDUES AND THEIR IMPLICATION IN ENZYME CATALYSIS PDB-1asa: THE STRUCTURAL BASIS FOR THE REDUCED ACTIVITY OF THE Y226F(Y225F) ACTIVE SITE MUTANT OF E. COLI ASPARTATE AMINOTRANSFERASE ChemComp-A5Z: [3-[2,6-bis(chloranyl)phenyl]-5-methyl-1,2-oxazol-4-yl]methanol PDB-1asf: THE STRUCTURAL BASIS FOR THE REDUCED ACTIVITY OF THE Y226F(Y225F) ACTIVE SITE MUTANT OF E. COLI ASPARTATE AMINOTRANSFERASE PDB-1ash: THE STRUCTURE OF ASCARIS HEMOGLOBIN DOMAIN I AT 2.2 ANGSTROMS RESOLUTION: MOLECULAR FEATURES OF OXYGEN AVIDITY PDB-1asg: THE STRUCTURAL BASIS FOR THE REDUCED ACTIVITY OF THE Y226F(Y225F) ACTIVE SITE MUTANT OF E. COLI ASPARTATE AMINOTRANSFERASE PDB Unreleased entry PDB-1asi: Unknown entry PDB-1asj: P1/MAHONEY POLIOVIRUS, AT CRYOGENIC TEMPERATURE
Source	severe acute respiratory syndrome coronavirus 2
Keywords	VIRAL PROTEIN / Hydrolase / main protease