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TitleInsight into binding of endogenous neurosteroid ligands to the sigma-1 receptor.
Journal, issue, pagesNat Commun, Vol. 15, Page 5619-5619, Year 2024
Publish dateAug 23, 2023 (structure data deposition date)
AuthorsFu, C. / Xiao, Y. / Zhou, X. / Sun, Z.
External linksNat Commun / PubMed:38965213
MethodsX-ray diffraction
Resolution2.152 - 3.12 Å
Structure data

PDB-8w4b:
The sigma-1 receptor from Xenopus laevis in complex with progesterone by co-crystallization
Method: X-RAY DIFFRACTION / Resolution: 2.152 Å

PDB-8w4c:
The sigma-1 receptor from Xenopus laevis in complex with progesterone by soaking
Method: X-RAY DIFFRACTION / Resolution: 2.676 Å

PDB-8w4d:
Crystal structure of the sigma-1 receptor from Xenopus laevis in the absence of known ligands
Method: X-RAY DIFFRACTION / Resolution: 2.173 Å

PDB-8w4e:
Crystal structure of the sigma-1 receptor from Xenopus laevis in the absence of known ligands (C2 form)
Method: X-RAY DIFFRACTION / Resolution: 2.805 Å

PDB-8wue:
The sigma-1 receptor from Xenopus laevis in complex with dehydroepiandrosterone sulfate by soaking (C2 form)
Method: X-RAY DIFFRACTION / Resolution: 3.089 Å

PDB-8wwb:
The sigma-1 receptor from Xenopus laevis in complex with dehydroepiandrosterone sulfate by soaking (I432 form)
Method: X-RAY DIFFRACTION / Resolution: 2.503 Å

PDB-8ybb:
Crystal structure of the sigma-1 receptor from Xenopus laevis with side opening
Method: X-RAY DIFFRACTION / Resolution: 3.12 Å

Chemicals

ChemComp-STR:
PROGESTERONE / hormone*YM

ChemComp-HOH:
WATER

ChemComp-ZWY:
17-oxoandrost-5-en-3beta-yl hydrogen sulfate

Source
  • xenopus laevis (African clawed frog)
KeywordsMEMBRANE PROTEIN / sigma receptor / S1R / endogenous ligand / neurosteroid / P4 / DHEAS

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