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Structure paper

TitleLarge Stokes shift fluorescence activation in an RNA aptamer by intermolecular proton transfer to guanine.
Journal, issue, pagesNat Commun, Vol. 12, Page 3549-3549, Year 2021
Publish dateApr 19, 2021 (structure data deposition date)
AuthorsMieczkowski, M. / Steinmetzger, C. / Bessi, I. / Lenz, A.K. / Schmiedel, A. / Holzapfel, M. / Lambert, C. / Pena, V. / Hobartner, C.
External linksNat Commun / PubMed:34112799
MethodsX-ray diffraction
Resolution2.24 - 2.99 Å
Structure data

PDB-7oa3:
Crystal structure of Chili RNA aptamer in complex with DMHBO+ (Iridium hexammine co-crystallized form)
Method: X-RAY DIFFRACTION / Resolution: 2.8 Å

PDB-7oav:
Crystal structure of Chili RNA aptamer in complex with DMHBO+ (Iridium III hexammine soaking crystal form)
Method: X-RAY DIFFRACTION / Resolution: 2.99 Å

PDB-7oaw:
Crystal structure of the Chili RNA aptamer in complex with DMHBI+
Method: X-RAY DIFFRACTION / Resolution: 2.95 Å

PDB-7oax:
Crystal structure of the Chili RNA aptamer in complex with DMHBO+
Method: X-RAY DIFFRACTION / Resolution: 2.24 Å

Chemicals

ChemComp-V5Z:
DMHBO+

ChemComp-GTP:
GUANOSINE-5'-TRIPHOSPHATE / GTP, energy-carrying molecule*YM

ChemComp-K:
Unknown entry

ChemComp-IR:
Unknown entry

ChemComp-MG:
Unknown entry

ChemComp-CL:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-V6T:
DMHBI+

ChemComp-SPM:
SPERMINE

ChemComp-GOL:
GLYCEROL

Source
  • synthetic construct (others)
KeywordsRNA / RNA aptamer / aptamer / Chili / fluorogenic RNA

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